FFCP PHASE1:Hg19::chr3:29322933..29322950,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27303 | |EntrezGene=27303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13427 | |HGNC=13427 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000273139,ENST00000383766,uc003cek.2,uc003cel.2,uc003cem.2,uc010hfq.2,uc010hfr.2_5end | |association_with_transcript=0bp_to_ENST00000273139,ENST00000383766,uc003cek.2,uc003cel.2,uc003cem.2,uc010hfq.2,uc010hfr.2_5end | ||
|cluster_id=chr3:29322933..29322950,+ | |||
|description=CAGE_peak_7_at_RBMS3_5end | |description=CAGE_peak_7_at_RBMS3_5end | ||
|id=chr3:29322933..29322950,+ | |id=chr3:29322933..29322950,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.01e-10!180;CL:0000057!1.89e-07!75 | |ontology_enrichment_celltype=CL:0000055!3.01e-10!180;CL:0000057!1.89e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.71e-08;3!CL:0000067;2.71e-08;3!CL:0005012;2.71e-08;3!CL:0002304;2.71e-08;3!CL:0002504;7.10e-08;3!CL:1000279;7.10e-08;3!CL:1000280;7.10e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,2.16e-08,3;CL:1000279,2.16e-08,3;CL:1000280,2.16e-08,3;CL:0000064,6.74e-08,3;CL:0000067,6.74e-08,3;CL:0005012,6.74e-08,3;CL:0002304,6.74e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!8.26e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.01e-08;3!UBERON:0000946;2.01e-08;3!UBERON:0001778;2.71e-08;3!UBERON:0001775;2.71e-08;3!UBERON:0001443;4.27e-08;11!UBERON:0000059;2.37e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,4.23e-08,3;UBERON:0009751,4.23e-08,3;UBERON:0000946,4.23e-08,3;UBERON:0002523,4.23e-08,3;UBERON:0005983,4.23e-08,3;UBERON:0002165,4.23e-08,3;UBERON:0002062,4.23e-08,3;UBERON:0007280,4.23e-08,3;UBERON:0001443,5.50e-08,11;UBERON:0001778,6.74e-08,3;UBERON:0001775,6.74e-08,3;UBERON:0000059,1.29e-07,11 | |||
|phase1_expression=2.18014055124668,1.07050261945492,1.12763523276777,0,0.893922188854576,1.74467704820074,0,0,0,0,0,0.218441372130172,0,0.74259811776028,0,0.672325146451775,0.602694528023977,1.46062018077475,1.95173119516203,0,0.204000691244253,0,0,0.136874425072884,1.00434111675842,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651844533267181,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.511450247374121,0.722878304769133,0,1.59331170856906,0,0,1.03988298880475,2.4390233720882,1.14185221401064,0.261958150995425,0,0,0,0,0,0.476981248610684,0,0,0,0,0.347140501607594,0,0,0.825354125820202,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.625098097988558,0.673588117878509,0.563057402416611,0,0,0,0,0,0,1.98788780678127,0.379891534993739,0.662045904066094,0.860509862246441,0.709336764396714,0,1.06748995729705,0.98667019366864,0.311211035399766,0.808264032418128,0.980771418680752,0,0.576175924479999,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0.206651562351531,0,1.7308685049499,0,0,0.505008341862199,0.250237039743928,0,0,1.5324389789951,0.300476117813194,0.340296549480063,0.538168907066586,0.640672166455702,0.635795703478686,0.300091096084402,0.515262646192195,0.515281080091258,0.18611685633159,1.0126579934476,0.0974370051611986,1.26216887122057,0.920498986422993,0.323292113637624,0.355009592516614,0.201504196455281,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0.168584690078102,0,0.330881918197182,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0,0.514703430895577,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0.352226082707465,0.144366447761074,0,0.951270761172991,0,0,0,0,0,0,0.335964256397719,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.57191197463259,0.542621605391443,0,0,1.06617584622764,0.791951872933429,0.904318131178758,0,0.499864955910285,0,0,0,0.239624855491583,1.14861935834114,0,0.579125226670317,1.2328579353023,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,1.00034104211935,0.271265023699736,1.24782516918484,1.07057393278297,0.788512075169673,0.702848489956279,0,0,0,0,0.368738337083406,0.521301686808497,0,0,0,0,0,0,0,0,0.496215615637554,1.38115775959256,3.08726103876381,1.66580894032411,0,1.76939313257968,1.48418066444991,0.616838775210622,0,0.246381468041427,0,0.464841513839837,0,0.200506470303285,0,0.459257792658427,0.182091168006717,0.786746489756545,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0.386682873168488,0.616194468458578,0.307007349452259,0,1.93356440762893,2.0302337147992,0.511359764496605,0,0,0.384380134730212,0.382838137483752,0.30347334256665,0,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,0.744316738719335,0,0.953150969619124,0.255897791311334,0.42793898803392,0.318203247925937,0,1.79872457583315,1.92175920815238,1.29593642580255,0,0,0.421258456238981,0.48763373908959,2.19342140668156,0,0.272999822815972,0.707027159768564,2.26016233240486,0,0,0.438450885253763,0.578775534266688,1.9676842561399,0,0.30982349809975,0,0.286822704408103,0.785992328104969,1.07001315444375,0,1.47775344708365,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.564862804660675,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,1.30062222588003,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.485442086998054,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0.556543525114529,0,0,0.398495976502139,1.10513566212459,0,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0.508507300585533,0.472775363535873,1.03423011972439,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0.683652335082007,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.707660516026713,1.22206028986725,0,0,0,0,3.21031058919516,0.234264445725339,0,0.19566461893209,0,1.18375320854817,0,0,0.31593289814244,0.150323419414493,0,0,0.330991955875499,0,0,0.284609546029793,1.38674673013139,0,0.195984794828755,0.261177619741208,0.698906672968121,0.859930162358083,0,0.0730893170861856,0.164230914106418,0.0969890164884194,0.529536760149002,0.451961481561065,0.548167698587004,0,0.0633107959558787,0,0.160317640503067,1.49417096317547,0.19980960958213,0,0.343609788497747,0,0,0.248505071130865,0.707082103850386,0.407712618220842,0.523014231561666,0.509991088181609,0,0,0.273810757783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| 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| ||
|short_description=p7@RBMS3 | |short_description=p7@RBMS3 | ||
}} | }} |
Latest revision as of 21:51, 17 September 2015
Short description: | p7@RBMS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RBMS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000273139, ENST00000383766, uc003cek.2, uc003cel.2, uc003cem.2, uc010hfq.2, uc010hfr.2_5end |
EntrezGene: | RBMS3 |
HGNC: | 13427 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 2.16e-08 | 3 |
smooth muscle cell of large intestine | 2.16e-08 | 3 |
smooth muscle cell of colon | 2.16e-08 | 3 |
ciliated cell | 6.74e-08 | 3 |
ciliated epithelial cell | 6.74e-08 | 3 |
multi-ciliated epithelial cell | 6.74e-08 | 3 |
non-pigmented ciliary epithelial cell | 6.74e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 4.23e-08 | 3 |
cardiac mesenchyme | 4.23e-08 | 3 |
cardial valve | 4.23e-08 | 3 |
tunica intima | 4.23e-08 | 3 |
heart layer | 4.23e-08 | 3 |
endocardium | 4.23e-08 | 3 |
endocardial cushion | 4.23e-08 | 3 |
presumptive endocardium | 4.23e-08 | 3 |
chest | 5.50e-08 | 11 |
ciliary epithelium | 6.74e-08 | 3 |
ciliary body | 6.74e-08 | 3 |
large intestine | 1.29e-07 | 11 |