FFCP PHASE1:Hg19::chr3:18466927..18466934,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6304 | |EntrezGene=6304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |HGNC=10541 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_ENST00000450898_5end | |association_with_transcript=-66bp_to_ENST00000450898_5end | ||
|cluster_id=chr3:18466927..18466934,- | |||
|description=CAGE_peak_31_at_SATB1_5end | |description=CAGE_peak_31_at_SATB1_5end | ||
|id=chr3:18466927..18466934,- | |id=chr3:18466927..18466934,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;2.45e-14;31!DOID:1240;8.96e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.74e-15,31;DOID:1240,3.73e-12,39;DOID:2531,2.08e-09,51;DOID:0060083,2.08e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.72e-10!41;UBERON:0001890!1.72e-10!41;UBERON:0006240!1.72e-10!41;UBERON:0003080!4.22e-10!42;UBERON:0001893!7.51e-10!34;UBERON:0001950!1.24e-09!20;UBERON:0001869!1.40e-09!32;UBERON:0000956!1.91e-09!25;UBERON:0000203!1.91e-09!25;UBERON:0002791!2.82e-09!33;UBERON:0001049!4.61e-09!57;UBERON:0005068!4.61e-09!57;UBERON:0006241!4.61e-09!57;UBERON:0007135!4.61e-09!57;UBERON:0002020!5.37e-09!34;UBERON:0003528!5.37e-09!34;UBERON:0003056!8.18e-09!61;UBERON:0002619!1.78e-08!22;UBERON:0000073!1.06e-07!94;UBERON:0001016!1.06e-07!94;UBERON:0002616!1.09e-07!59;UBERON:0007023!1.24e-07!115;UBERON:0002346!2.57e-07!90;UBERON:0005743!2.75e-07!86;UBERON:0003075!2.89e-07!86;UBERON:0007284!2.89e-07!86;UBERON:0000955!7.03e-07!69;UBERON:0006238!7.03e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.77e-57;2!UBERON:0005058;4.77e-57;2!UBERON:0009113;4.77e-57;2!UBERON:0004177;1.44e-23;5!UBERON:0005057;1.44e-23;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.65e-29,4;UBERON:0005058,3.65e-29,4;UBERON:0009113,3.65e-29,4;UBERON:0003295,3.65e-29,4;UBERON:0005562,3.65e-29,4;UBERON:0003351,7.84e-20,6;UBERON:0004177,3.71e-17,7;UBERON:0005057,3.71e-17,7;UBERON:0000974,2.51e-12,10;UBERON:0003408,2.51e-12,10;UBERON:0001042,2.51e-12,10;UBERON:0009145,2.51e-12,10;UBERON:0006562,2.68e-11,11;UBERON:0009722,2.68e-11,11;UBERON:0007690,2.68e-11,11;UBERON:0008814,2.86e-07,18;UBERON:0001557,6.19e-07,19 | |||
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| ||
|short_description=p31@SATB1 | |short_description=p31@SATB1 | ||
}} | }} |
Latest revision as of 03:06, 17 September 2015
Short description: | p31@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_SATB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_ENST00000450898_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.65e-29 | 4 |
hemolymphoid system gland | 3.65e-29 | 4 |
thymic region | 3.65e-29 | 4 |
pharyngeal gland | 3.65e-29 | 4 |
thymus primordium | 3.65e-29 | 4 |
pharyngeal epithelium | 7.84e-20 | 6 |
hemopoietic organ | 3.71e-17 | 7 |
immune organ | 3.71e-17 | 7 |
neck | 2.51e-12 | 10 |
gland of gut | 2.51e-12 | 10 |
chordate pharynx | 2.51e-12 | 10 |
pharyngeal region of foregut | 2.51e-12 | 10 |
pharynx | 2.68e-11 | 11 |
entire pharyngeal arch endoderm | 2.68e-11 | 11 |
early pharyngeal endoderm | 2.68e-11 | 11 |
pharyngeal arch system | 2.86e-07 | 18 |
upper respiratory tract | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.74e-15 | 31 |
leukemia | 3.73e-12 | 39 |
hematologic cancer | 2.08e-09 | 51 |
immune system cancer | 2.08e-09 | 51 |