FFCP PHASE1:Hg19::chr19:45927622..45927657,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2067 | |EntrezGene=2067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3433 | |HGNC=3433 | ||
|TSSclassifier=strong | |||
|UniProt=P07992,Q96S40,B2RC01 | |UniProt=P07992,Q96S40,B2RC01 | ||
|association_with_transcript=-445bp_to_ENST00000300853,ENST00000340192,NM_001166049,NM_001983,uc002pbs.1,uc002pbt.1_5end | |association_with_transcript=-445bp_to_ENST00000300853,ENST00000340192,NM_001166049,NM_001983,uc002pbs.1,uc002pbt.1_5end | ||
|cluster_id=chr19:45927622..45927657,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_ERCC1_5end | |description=CAGE_peak_4_at_ERCC1_5end | ||
|id=chr19:45927622..45927657,- | |id=chr19:45927622..45927657,- | ||
|ontology_enrichment_celltype=CL:0000548!1.22e-27!679;CL:0000004!1.22e-27!679;CL:0000255!1.22e-27!679;CL:0000012!4.69e-27!682;CL:0002371!1.48e-25!591;CL:0000144!1.41e-23!625;CL:0000220!9.09e-19!246;CL:0002321!2.19e-18!248;CL:0000003!5.17e-18!722;CL:0000222!7.79e-18!119;CL:0000055!1.20e-17!180;CL:0000063!8.13e-14!578;CL:0000115!2.23e-11!35;CL:0000359!3.34e-11!32;CL:0002139!7.24e-11!24;CL:0002057!9.17e-11!42;CL:0000066!1.62e-10!254;CL:0000192!1.67e-10!42;CL:0000514!1.67e-10!42;CL:0000680!2.02e-10!57;CL:0000056!2.02e-10!57;CL:0000355!2.02e-10!57;CL:0000183!2.20e-10!59;CL:0000187!3.06e-10!54;CL:0000860!3.94e-10!45;CL:0000071!5.27e-10!18;CL:0002546!5.27e-10!18;CL:0000057!8.39e-10!75;CL:0000393!1.23e-09!60;CL:0000211!1.23e-09!60;CL:0002078!1.29e-09!44;CL:0000213!1.44e-07!57;CL:0000215!1.44e-07!57;CL:0000076!6.53e-07!62;CL:0000723!8.66e-07!436 | |ontology_enrichment_celltype=CL:0000548!1.22e-27!679;CL:0000004!1.22e-27!679;CL:0000255!1.22e-27!679;CL:0000012!4.69e-27!682;CL:0002371!1.48e-25!591;CL:0000144!1.41e-23!625;CL:0000220!9.09e-19!246;CL:0002321!2.19e-18!248;CL:0000003!5.17e-18!722;CL:0000222!7.79e-18!119;CL:0000055!1.20e-17!180;CL:0000063!8.13e-14!578;CL:0000115!2.23e-11!35;CL:0000359!3.34e-11!32;CL:0002139!7.24e-11!24;CL:0002057!9.17e-11!42;CL:0000066!1.62e-10!254;CL:0000192!1.67e-10!42;CL:0000514!1.67e-10!42;CL:0000680!2.02e-10!57;CL:0000056!2.02e-10!57;CL:0000355!2.02e-10!57;CL:0000183!2.20e-10!59;CL:0000187!3.06e-10!54;CL:0000860!3.94e-10!45;CL:0000071!5.27e-10!18;CL:0002546!5.27e-10!18;CL:0000057!8.39e-10!75;CL:0000393!1.23e-09!60;CL:0000211!1.23e-09!60;CL:0002078!1.29e-09!44;CL:0000213!1.44e-07!57;CL:0000215!1.44e-07!57;CL:0000076!6.53e-07!62;CL:0000723!8.66e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.35e-18;33!CL:0002057;5.35e-18;33!CL:0002139;1.11e-12;24!CL:0000473;1.33e-12;39!CL:0000234;1.33e-12;39!CL:0000115;1.53e-12;36!CL:0000359;7.72e-12;32!CL:0000071;1.63e-11;18!CL:0000192;5.16e-08;43!CL:0002078;8.89e-08;45!CL:1000413;1.58e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.07e-18,121;CL:0002321,2.50e-15,250;CL:0000115,2.88e-14,36;CL:0000860,1.11e-12,42;CL:0002057,1.11e-12,42;CL:0000359,1.42e-12,32;CL:0002139,1.84e-12,24;CL:0000071,1.88e-11,18;CL:0002546,1.88e-11,18;CL:0002078,2.61e-11,45;CL:0000473,4.94e-11,48;CL:0000234,4.94e-11,48;CL:0000192,1.21e-10,43;CL:0000514,1.21e-10,43;CL:0000680,6.41e-10,58;CL:0000056,6.41e-10,58;CL:0000355,6.41e-10,58;CL:0000723,7.96e-10,433;CL:0000187,1.12e-09,55;CL:0000048,1.78e-09,427;CL:0000213,7.69e-09,58;CL:0000215,7.69e-09,58;CL:0000034,7.90e-09,441;CL:0000393,2.46e-08,61;CL:0000211,2.46e-08,61;CL:0000057,2.52e-08,76;CL:0002194,1.42e-07,59;CL:0000576,1.42e-07,59;CL:0000040,1.42e-07,59;CL:0000559,1.42e-07,59;CL:1000413,1.68e-07,9;CL:0000066,5.81e-07,253;CL:0002009,6.74e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;1.63e-11;18!CL:0002057;4.46e-10;42!CL:0000514;5.16e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.64e-19!69;UBERON:0002049!8.81e-19!79;UBERON:0007798!8.81e-19!79;UBERON:0003914!3.74e-18!118;UBERON:0001981!4.49e-18!60;UBERON:0007500!4.49e-18!60;UBERON:0004537!4.49e-18!60;UBERON:0006965!4.49e-18!60;UBERON:0000926!1.27e-17!448;UBERON:0004120!1.27e-17!448;UBERON:0006603!1.27e-17!448;UBERON:0001637!6.30e-16!42;UBERON:0003509!6.30e-16!42;UBERON:0004572!6.30e-16!42;UBERON:0000467!1.02e-15!625;UBERON:0004872!1.84e-15!84;UBERON:0000480!1.99e-15!626;UBERON:0003081!2.66e-15!216;UBERON:0000468!1.29e-14!659;UBERON:0004535!2.04e-14!110;UBERON:0001009!6.25e-14!113;UBERON:0000490!1.43e-12!138;UBERON:0002204!8.61e-12!167;UBERON:0004573!9.69e-12!33;UBERON:0004571!9.69e-12!33;UBERON:0005256!1.82e-11!143;UBERON:0002100!2.97e-11!216;UBERON:0000914!3.61e-11!83;UBERON:0002329!3.61e-11!83;UBERON:0003077!3.61e-11!83;UBERON:0003059!3.61e-11!83;UBERON:0007282!3.61e-11!83;UBERON:0009618!3.61e-11!83;UBERON:0007285!3.61e-11!83;UBERON:0000923!1.35e-10!604;UBERON:0005291!1.35e-10!604;UBERON:0006598!1.35e-10!604;UBERON:0002532!1.35e-10!604;UBERON:0004290!2.01e-10!70;UBERON:0002050!2.31e-10!605;UBERON:0005423!2.31e-10!605;UBERON:0000486!2.98e-10!82;UBERON:0001986!5.27e-10!18;UBERON:0004638!5.27e-10!18;UBERON:0004852!5.27e-10!18;UBERON:0000922!6.10e-10!612;UBERON:0000487!2.76e-09!22;UBERON:0001134!1.56e-08!61;UBERON:0002036!1.56e-08!61;UBERON:0003082!1.56e-08!61;UBERON:0002385!5.86e-08!63;UBERON:0001015!5.86e-08!63;UBERON:0000383!5.86e-08!63;UBERON:0006914!2.50e-07!25;UBERON:0003102!3.61e-07!95;UBERON:0003104!4.17e-07!238;UBERON:0009142!4.17e-07!238;UBERON:0000119!5.51e-07!312;UBERON:0000483!9.05e-07!309;UBERON:0000947!9.19e-07!21;UBERON:0010191!9.19e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;1.80e-12;56!UBERON:0001981;1.80e-12;56!UBERON:0004537;1.80e-12;56!UBERON:0001637;2.67e-12;42!UBERON:0003509;2.67e-12;42!UBERON:0004572;2.67e-12;42!UBERON:0004638;1.63e-11;18!UBERON:0001986;1.63e-11;18!UBERON:0004852;1.63e-11;18!UBERON:0003914;1.95e-11;74!UBERON:0004573;2.26e-11;33!UBERON:0004571;2.26e-11;33!UBERON:0000487;4.18e-11;22!UBERON:0000055;7.15e-11;65!UBERON:0002049;4.50e-09;75!UBERON:0007798;4.50e-09;75!UBERON:0006914;1.17e-08;25!UBERON:0000025;2.08e-08;93!UBERON:0000490;3.93e-08;33!UBERON:0003915;1.58e-07;9!UBERON:0004700;1.58e-07;9!UBERON:0001917;1.58e-07;9 | |||
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| ||
|short_description=p4@ERCC1 | |short_description=p4@ERCC1 | ||
}} | }} |
Latest revision as of 17:11, 18 September 2015
Short description: | p4@ERCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ERCC1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -445bp_to_ENST00000300853, ENST00000340192, NM_001166049, NM_001983, uc002pbs.1, uc002pbt.1_5end |
EntrezGene: | ERCC1 |
HGNC: | 3433 |
UniProt: | P07992Q96S40B2RC01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data