FFCP PHASE1:Hg19::chr3:129513434..129513460,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23023 | |EntrezGene=23023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29116 | |HGNC=29116 | ||
|TSSclassifier=strong | |||
|UniProt=O94876 | |UniProt=O94876 | ||
|association_with_transcript=-175bp_to_ENST00000329333,uc011blc.1_5end | |association_with_transcript=-175bp_to_ENST00000329333,uc011blc.1_5end | ||
|cluster_id=chr3:129513434..129513460,- | |||
|coexpression_cluster_id=C4282 | |||
|description=CAGE_peak_8_at_TMCC1_5end | |description=CAGE_peak_8_at_TMCC1_5end | ||
|id=chr3:129513434..129513460,- | |id=chr3:129513434..129513460,- | ||
|ontology_enrichment_celltype=CL:0000066!7.79e-38!254;CL:0002076!1.62e-16!43;CL:0000076!1.00e-14!62;CL:0000220!2.09e-11!246;CL:0002321!4.00e-11!248;CL:0000223!4.82e-11!59;CL:0002251!2.87e-08!21 | |ontology_enrichment_celltype=CL:0000066!7.79e-38!254;CL:0002076!1.62e-16!43;CL:0000076!1.00e-14!62;CL:0000220!2.09e-11!246;CL:0002321!4.00e-11!248;CL:0000223!4.82e-11!59;CL:0002251!2.87e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.83e-11;3!CL:0002541;2.07e-11;3!CL:0000349;1.50e-10;19!CL:0000244;1.05e-08;4!CL:0000731;1.05e-08;4!CL:0002159;1.47e-08;14!CL:0002076;3.13e-08;42!CL:0002536;4.94e-08;2!CL:0000317;5.68e-08;2!CL:1000448;5.68e-08;2!CL:0002308;5.68e-08;2!CL:0002140;5.68e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.06e-17,253;CL:0002541,1.34e-11,3;CL:0002621,1.91e-11,3;CL:0000349,1.17e-10,19;CL:0002076,4.90e-09,42;CL:0000244,8.56e-09,4;CL:0000731,8.56e-09,4;CL:0002159,1.13e-08,14;CL:0000317,3.03e-08,2;CL:1000448,3.03e-08,2;CL:0002308,3.03e-08,2;CL:0002140,3.03e-08,2;CL:0002536,5.50e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.06e-14!106;DOID:0050687!7.86e-12!143;DOID:1749!1.18e-11!14;DOID:162!7.83e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.72e-09!14;UBERON:0000158!1.72e-09!14;UBERON:0003124!3.62e-09!7;UBERON:0004119!1.41e-08!169;UBERON:0000925!1.41e-08!169;UBERON:0006595!1.41e-08!169;UBERON:0000365!3.21e-07!5;UBERON:0000344!3.31e-07!12;UBERON:0001004!3.40e-07!72;UBERON:0005911!4.09e-07!82;UBERON:0005795!6.48e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;7.55e-14;12!UBERON:0005631;2.99e-12;10!UBERON:0000158;2.99e-12;10!UBERON:0000365;7.60e-12;5!UBERON:0001949;1.83e-11;3!UBERON:0003124;2.07e-11;3!UBERON:0000920;2.07e-11;3!UBERON:0000478;4.14e-10;24!UBERON:0005910;7.17e-10;6!UBERON:0001987;3.93e-08;4!UBERON:0002419;5.68e-08;2!UBERON:0007771;5.68e-08;2!UBERON:0003297;5.68e-08;2!UBERON:0001821;5.68e-08;2!UBERON:0003487;5.68e-08;2!UBERON:0001820;5.68e-08;2!UBERON:0005911;1.82e-07;36!UBERON:0003350;2.18e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.89e-19,14;UBERON:0000158,9.89e-19,14;UBERON:0003124,1.16e-17,7;UBERON:0000365,5.79e-12,5;UBERON:0000920,1.34e-11,3;UBERON:0001949,1.91e-11,3;UBERON:0000478,3.37e-10,24;UBERON:0005910,5.73e-10,6;UBERON:0006554,2.48e-08,47;UBERON:0001987,3.00e-08,4;UBERON:0004340,3.00e-08,4;UBERON:0002419,3.03e-08,2;UBERON:0007771,3.03e-08,2;UBERON:0003297,3.03e-08,2;UBERON:0001821,3.03e-08,2;UBERON:0003487,3.03e-08,2;UBERON:0001820,3.03e-08,2;UBERON:0005089,3.03e-08,2;UBERON:0005088,3.03e-08,2;UBERON:0001008,4.18e-08,48;UBERON:0003350,2.15e-07,8;UBERON:0004923,3.74e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,2.79120467188971,7.20856528029568,1.31883489114227,0,0,0,0,0,0,0,0,0,0.572471974262113,1.09499540058307,0.753255837568817,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,0.56530794192401,0,0,0.208994966536811,0.516833518338658,1.06729878806013,1.00416183829401,2.01414658554573,0,0,0,0,0,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70565194428616,5.72766853240753,2.00763216772303,0,0,0.116193942869518,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,3.51200913307602,0,1.40740561376283,0.185176890317059,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,9.07103492273841,4.25325291727159,0.895585227028483,1.45316969256981,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,2.60279707715243,0,1.00509759200609,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0.606255142892519,3.32870879020994,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,5.41367469818869,0.184161977871793,0,0,0,3.15839729035188,4.38987421495164,0,0,5.48868470242954,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0.671624264166535,0,0,0.256450125116389,0,0,0.412164046590889,0,0,5.74265537996172,1.95018073810956,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0.267096106940212,1.32227932288782,1.53752053892085,5.23212121227795,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.865999014529609,0.670302275535787,0,0.376575203107117,5.16606447205476,1.68471475667626,0.886860307073351,8.72948920786446,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,2.3874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,1.02268682502155,0,0,2.78591888556713,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.227586896570999,1.01701460117107,0,0.344743373241465,0,0,0,0,0,0,0,0,0,1.67308493134324,0.0769502585037971,0,0.23056390438806,0.448788222048861,0.54323685961004,4.14701507651495,1.92354946143911,9.59462596833542,0,0,0,0,0,0,0,0,0.210998064528027,1.30586246527318,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,1.83643656978294,0,0,0,0,0,0,0,0.569219092059585,0.277349346026277,0.520679215005393,0.979923974143776,2.43765778425127,0,1.54787429224455,0.0967563312890851,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,1.17330829640882,0.881747022766871,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0,0.124252535565433,0.471388069233591,1.08723364858891,1.46443984837266,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0.670869375198532,0.0788057072991982,0.0524545881349981,0.211200673038813,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0.192619830407303,0.428883182749851,0,0,0.463044948647668,0,0.71635536432595,1.54400723580486,0.438568099157414,0,0.38582807654183,0.168942440653073,0.512483037175893,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0.422624246717254,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.392590874004102,1.06172751012966,0.366857197043358,0.577628330751691,0,0,0,0,0,0,0,0.163771917510097,5.61853127624772,0,0,0,0,0,0,0,0,1.66091155931474,0,0,0.606965604236632,0,1.33053555243958,0,0,0,0,0.590969204419841,0.778619813244484,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0,1.14553434272025,0.31020638566432,0,0.447421727191169,0.392600934460972,0,0,0,0,0.485710993059139,0.467878926924211,0.198950775161368,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,4.2347384605883,1.12337913364836,0,0,0,0,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0,0.713921808193872,0,2.94063678511504,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0.217716747896961,0,0.740872583160463,0.0717222053926763,0,4.88419611665847,0,0,0.179650404213174,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,2.79120467188971,7.20856528029568,1.31883489114227,0,0,0,0,0,0,0,0,0,0.572471974262113,1.09499540058307,0.753255837568817,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,0.56530794192401,0,0,0.208994966536811,0.516833518338658,1.06729878806013,1.00416183829401,2.01414658554573,0,0,0,0,0,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70565194428616,5.72766853240753,2.00763216772303,0,0,0.116193942869518,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,3.51200913307602,0,1.40740561376283,0.185176890317059,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,9.07103492273841,4.25325291727159,0.895585227028483,1.45316969256981,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,2.60279707715243,0,1.00509759200609,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0.606255142892519,3.32870879020994,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,5.41367469818869,0.184161977871793,0,0,0,3.15839729035188,4.38987421495164,0,0,5.48868470242954,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0.671624264166535,0,0,0.256450125116389,0,0,0.412164046590889,0,0,5.74265537996172,1.95018073810956,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0.267096106940212,1.32227932288782,1.53752053892085,5.23212121227795,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.865999014529609,0.670302275535787,0,0.376575203107117,5.16606447205476,1.68471475667626,0.886860307073351,8.72948920786446,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,2.3874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,1.02268682502155,0,0,2.78591888556713,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.227586896570999,1.01701460117107,0,0.344743373241465,0,0,0,0,0,0,0,0,0,1.67308493134324,0.0769502585037971,0,0.23056390438806,0.448788222048861,0.54323685961004,4.14701507651495,1.92354946143911,9.59462596833542,0,0,0,0,0,0,0,0,0.210998064528027,1.30586246527318,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,1.83643656978294,0,0,0,0,0,0,0,0.569219092059585,0.277349346026277,0.520679215005393,0.979923974143776,2.43765778425127,0,1.54787429224455,0.0967563312890851,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,1.17330829640882,0.881747022766871,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0,0.124252535565433,0.471388069233591,1.08723364858891,1.46443984837266,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0.670869375198532,0.0788057072991982,0.0524545881349981,0.211200673038813,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0.192619830407303,0.428883182749851,0,0,0.463044948647668,0,0.71635536432595,1.54400723580486,0.438568099157414,0,0.38582807654183,0.168942440653073,0.512483037175893,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0.422624246717254,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.392590874004102,1.06172751012966,0.366857197043358,0.577628330751691,0,0,0,0,0,0,0,0.163771917510097,5.61853127624772,0,0,0,0,0,0,0,0,1.66091155931474,0,0,0.606965604236632,0,1.33053555243958,0,0,0,0,0.590969204419841,0.778619813244484,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0,1.14553434272025,0.31020638566432,0,0.447421727191169,0.392600934460972,0,0,0,0,0.485710993059139,0.467878926924211,0.198950775161368,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,4.2347384605883,1.12337913364836,0,0,0,0,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0,0.713921808193872,0,2.94063678511504,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0.217716747896961,0,0.740872583160463,0.0717222053926763,0,4.88419611665847,0,0,0.179650404213174,0,0,0.406896178315738,0,0,0 | ||
|short_description=p8@TMCC1 | |short_description=p8@TMCC1 | ||
}} | }} |
Latest revision as of 18:18, 24 September 2015
Short description: | p8@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TMCC1_5end |
Coexpression cluster: | C4282_Mallassezderived_Small_Gingival_Urothelial_papillotubular_Sebocyte_transitionalcell |
Association with transcript: | -175bp_to_ENST00000329333, uc011blc.1_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | O94876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.06e-17 | 253 |
chorionic membrane mesenchymal stem cell | 1.34e-11 | 3 |
gingival epithelial cell | 1.91e-11 | 3 |
extraembryonic cell | 1.17e-10 | 19 |
endo-epithelial cell | 4.90e-09 | 42 |
transitional epithelial cell | 8.56e-09 | 4 |
urothelial cell | 8.56e-09 | 4 |
general ecto-epithelial cell | 1.13e-08 | 14 |
sebum secreting cell | 3.03e-08 | 2 |
epithelial cell of sweat gland | 3.03e-08 | 2 |
epithelial cell of skin gland | 3.03e-08 | 2 |
acinar cell of sebaceous gland | 3.03e-08 | 2 |
amniotic epithelial cell | 5.50e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.89e-19 | 14 |
membranous layer | 9.89e-19 | 14 |
chorion | 1.16e-17 | 7 |
urothelium | 5.79e-12 | 5 |
egg chorion | 1.34e-11 | 3 |
gingival epithelium | 1.91e-11 | 3 |
extraembryonic structure | 3.37e-10 | 24 |
transitional epithelium | 5.73e-10 | 6 |
urinary system structure | 2.48e-08 | 47 |
placenta | 3.00e-08 | 4 |
allantois | 3.00e-08 | 4 |
skin gland | 3.03e-08 | 2 |
epidermis gland | 3.03e-08 | 2 |
gland of integumental system | 3.03e-08 | 2 |
sebaceous gland | 3.03e-08 | 2 |
skin sebaceous gland | 3.03e-08 | 2 |
sweat gland | 3.03e-08 | 2 |
sweat gland placode | 3.03e-08 | 2 |
sebaceous gland placode | 3.03e-08 | 2 |
renal system | 4.18e-08 | 48 |
epithelium of mucosa | 2.15e-07 | 8 |
organ component layer | 3.74e-07 | 66 |