FFCP PHASE1:Hg19::chr2:47054961..47054993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100134259 | |EntrezGene=100134259 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000490950,NR_024452,uc002rvi.3_5end | |association_with_transcript=-9bp_to_ENST00000490950,NR_024452,uc002rvi.3_5end | ||
|cluster_id=chr2:47054961..47054993,+ | |||
|coexpression_cluster_id=C4233 | |||
|description=CAGE_peak_1_at_LOC100134259_5end | |description=CAGE_peak_1_at_LOC100134259_5end | ||
|id=chr2:47054961..47054993,+ | |id=chr2:47054961..47054993,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.32e-35!180;CL:0000057!1.04e-32!75;CL:0002620!5.67e-26!23;CL:0000048!8.38e-23!430;CL:0000723!5.56e-22!436;CL:0000034!6.37e-21!444;CL:0002334!2.46e-15!12;CL:0002371!8.02e-15!591;CL:0002320!1.07e-13!365;CL:0000144!2.24e-13!625;CL:0000680!1.67e-12!57;CL:0000056!1.67e-12!57;CL:0000355!1.67e-12!57;CL:0000134!1.82e-12!358;CL:0002570!1.24e-11!8;CL:0000219!3.08e-11!390;CL:0000187!1.78e-10!54;CL:0000188!2.20e-10!9;CL:0000548!3.55e-10!679;CL:0000004!3.55e-10!679;CL:0000255!3.55e-10!679;CL:0000012!5.94e-10!682;CL:0000183!6.00e-09!59;CL:0000393!1.12e-08!60;CL:0000211!1.12e-08!60;CL:0002551!1.19e-07!6;CL:0000003!3.62e-07!722 | |ontology_enrichment_celltype=CL:0000055!1.32e-35!180;CL:0000057!1.04e-32!75;CL:0002620!5.67e-26!23;CL:0000048!8.38e-23!430;CL:0000723!5.56e-22!436;CL:0000034!6.37e-21!444;CL:0002334!2.46e-15!12;CL:0002371!8.02e-15!591;CL:0002320!1.07e-13!365;CL:0000144!2.24e-13!625;CL:0000680!1.67e-12!57;CL:0000056!1.67e-12!57;CL:0000355!1.67e-12!57;CL:0000134!1.82e-12!358;CL:0002570!1.24e-11!8;CL:0000219!3.08e-11!390;CL:0000187!1.78e-10!54;CL:0000188!2.20e-10!9;CL:0000548!3.55e-10!679;CL:0000004!3.55e-10!679;CL:0000255!3.55e-10!679;CL:0000012!5.94e-10!682;CL:0000183!6.00e-09!59;CL:0000393!1.12e-08!60;CL:0000211!1.12e-08!60;CL:0002551!1.19e-07!6;CL:0000003!3.62e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.60e-30;23!CL:0002570;6.67e-17;8!CL:0002334;1.26e-13;12!CL:0000680;6.05e-13;7!CL:0000057;9.69e-12;73!CL:0000723;2.58e-11;61!CL:0000134;8.08e-10;55!CL:0002540;3.28e-09;6!CL:0000048;6.18e-09;58!CL:0000034;1.01e-08;69!CL:0002551;5.78e-08;6!CL:0000056;5.98e-08;4!CL:0002320;9.54e-08;188!CL:0000188;1.54e-07;9!CL:0002092;2.05e-07;10!CL:0002559;6.71e-07;5!CL:0000346;7.78e-07;3!CL:1000428;7.78e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.19e-30,23;CL:0000057,1.74e-26,76;CL:0000048,3.85e-19,427;CL:0000723,1.42e-18,433;CL:0000034,7.64e-18,441;CL:0002570,7.84e-17,8;CL:0002334,1.17e-13,12;CL:0002320,6.81e-13,361;CL:0000134,7.99e-13,354;CL:0000219,9.40e-11,386;CL:0002540,3.25e-09,6;CL:0002551,6.47e-08,6;CL:0000515,8.09e-08,4;CL:0000188,1.67e-07,9;CL:0002092,2.04e-07,10;CL:0002559,7.22e-07,5;CL:0000346,8.72e-07,3;CL:1000428,8.72e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;5.98e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!3.89e-08!14;DOID:17!4.02e-08!5;DOID:450!4.02e-08!5;DOID:66!4.02e-08!5;DOID:423!4.02e-08!5;DOID:0080000!4.02e-08!5;DOID:11722!4.02e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.72e-11;5!DOID:450;1.72e-11;5!DOID:66;1.72e-11;5!DOID:423;1.72e-11;5!DOID:0080000;1.72e-11;5!DOID:11722;1.72e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.64e-11,5;DOID:450,1.64e-11,5;DOID:66,1.64e-11,5;DOID:423,1.64e-11,5;DOID:0080000,1.64e-11,5;DOID:11722,1.64e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!8.78e-23!45;UBERON:0002416!8.78e-23!45;UBERON:0002097!9.64e-21!40;UBERON:0000914!5.87e-20!83;UBERON:0002329!5.87e-20!83;UBERON:0003077!5.87e-20!83;UBERON:0003059!5.87e-20!83;UBERON:0007282!5.87e-20!83;UBERON:0009618!5.87e-20!83;UBERON:0007285!5.87e-20!83;UBERON:0004290!9.43e-18!70;UBERON:0000486!2.30e-15!82;UBERON:0002384!4.42e-15!375;UBERON:0003102!1.69e-12!95;UBERON:0001013!3.08e-11!14;UBERON:0001134!4.15e-11!61;UBERON:0002036!4.15e-11!61;UBERON:0003082!4.15e-11!61;UBERON:0002067!4.97e-11!9;UBERON:0004016!4.97e-11!9;UBERON:0010083!4.97e-11!9;UBERON:0002385!1.75e-10!63;UBERON:0001015!1.75e-10!63;UBERON:0000383!1.75e-10!63;UBERON:0005256!6.84e-09!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;9.99e-19;41!UBERON:0001013;6.86e-17;14!UBERON:0002199;2.62e-16;46!UBERON:0002416;2.62e-16;46!UBERON:0003102;2.72e-14;50!UBERON:0002067;5.42e-13;9!UBERON:0002385;5.11e-09;31!UBERON:0001015;5.11e-09;31!UBERON:0000383;5.11e-09;31!UBERON:0002204;2.51e-08;70!UBERON:0001134;2.53e-08;16!UBERON:0002036;2.53e-08;16!UBERON:0002371;3.02e-08;12!UBERON:0002384;1.31e-07;198!UBERON:0002073;6.71e-07;5!UBERON:0000412;7.78e-07;3!UBERON:0001992;7.78e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.97e-27,46;UBERON:0002416,2.97e-27,46;UBERON:0002097,7.92e-24,41;UBERON:0001013,6.66e-17,14;UBERON:0002384,6.69e-15,371;UBERON:0002067,6.75e-13,9;UBERON:0004016,6.75e-13,9;UBERON:0010083,6.75e-13,9;UBERON:0003102,3.51e-12,99;UBERON:0002329,1.24e-11,71;UBERON:0003059,1.24e-11,71;UBERON:0007282,1.24e-11,71;UBERON:0004290,1.24e-11,71;UBERON:0009618,1.24e-11,71;UBERON:0003077,2.23e-11,72;UBERON:0007285,2.23e-11,72;UBERON:0007524,3.93e-11,73;UBERON:0007503,5.29e-10,78;UBERON:0000486,6.22e-10,83;UBERON:0002073,7.22e-07,5;UBERON:0005086,7.22e-07,5;UBERON:0000412,8.72e-07,3;UBERON:0001992,8.72e-07,3 | |||
|phase1_expression=1.09007027562334,1.71280419112787,0.563817616383885,0,0,1.74467704820074,0,6.31719873426831,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0.794455084879313,0.286836620748814,0.709336764396714,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0.624320153660641,1.1409436430889,1.34503812496621,3.05329696473789,3.88495066483516,3.51127016755621,0.204154171254893,0,0,1.18800285728205,0,3.64064544775211,0,0.168336113954066,0.125118519871964,0,0.877955241761676,6.43624371177941,1.50238058906597,0,7.71375433462106,4.27114777637135,15.6829606858076,6.30191301777245,10.6144105115592,8.75977836155139,15.447699075522,7.25738228637445,9.25651549031387,15.6508940031351,19.4225286135252,0.484938170456436,6.03516307278244,4.73534861669909,9.32583257707682,0,0,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,11.0507937081984,4.64367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0,7.15312891703765,5.917119267892,0.531876233169741,0,2.57207374262142,0,4.26275486425759,0.142977993658148,0,0,4.88604276440603,0,0,0,0,0,0,0,0,0.479249710983165,0,4.27910715122155,1.15825045334063,1.02738161275192,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,4.00136416847742,0,0,0,0,1.7571212248907,1.20378439891088,0,1.03473071292505,0,2.76553752812555,1.99832313276591,0,0,0,0,0,0,0,0.30239029332968,0.992431231275107,4.75732117192994,3.64858122762996,2.30650468660262,0.511707249066704,1.28683136914886,10.3892646511494,20.0472601943452,28.9425612260397,25.2951640522532,0.519254429183621,14.0614557936551,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0.386682873168488,1.54048617114644,0.460511024178389,4.13509717453592,4.0819693049944,2.75531718437034,2.13066568540252,0.445160178233687,0,0,0,0,3.253918845081,5.98143458978216,6.2733354314454,0,1.06461206063404,1.73986598415015,0,0,0,0,0,0,0,18.4557883797043,0,0.539617372749944,0,0.353437207037059,0.808729926293264,0,0.421258456238981,0,0.243713489631284,0,0.545999645631943,0,3.39024349860728,1.65409603063837,0,0.876901770507525,0,0,0,0,0,0,0,0,1.06428319221179,0.844430541190656,2.30506425071931,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,15.5591786202492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0.39961921916426,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5640573506961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1046147695199,10.2833856332779,17.7537875680836,7.57612021100357,9.81114816835043,16.0166019887376,0.228840068396924,5.89800602676632,4.66311601748341,2.36568239983414,0.955780602982214,0,0.310525913752519,12.8558924430665,27.6475383140315,4.69570555630561,1.50257608997218,0,0.406870733204662,14.3660440770022,0,21.8095867142892,0.796191777397232,0.400027764663154,2.06037423109676,3.03074539889327,0,0,0,0,0.226705925512272,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,3.81605220784102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57658514560601,0,0,0,7.46308754203024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,2.22934412268644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.79708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,1.38652688589425,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p1@LOC100134259 | |short_description=p1@LOC100134259 | ||
}} | }} |
Latest revision as of 11:16, 17 September 2015
Short description: | p1@LOC100134259 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100134259_5end |
Coexpression cluster: | C4233_Preadipocyte_mesenchymal_Fibroblast_Smooth_bone_Hair_Mesenchymal |
Association with transcript: | -9bp_to_ENST00000490950, NR_024452, uc002rvi.3_5end |
EntrezGene: | LOC100134259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.19e-30 | 23 |
fibroblast | 1.74e-26 | 76 |
multi fate stem cell | 3.85e-19 | 427 |
somatic stem cell | 1.42e-18 | 433 |
stem cell | 7.64e-18 | 441 |
mesenchymal stem cell of adipose | 7.84e-17 | 8 |
preadipocyte | 1.17e-13 | 12 |
connective tissue cell | 6.81e-13 | 361 |
mesenchymal cell | 7.99e-13 | 354 |
motile cell | 9.40e-11 | 386 |
mesenchymal stem cell of the bone marrow | 3.25e-09 | 6 |
fibroblast of dermis | 6.47e-08 | 6 |
skeletal muscle myoblast | 8.09e-08 | 4 |
cell of skeletal muscle | 1.67e-07 | 9 |
bone marrow cell | 2.04e-07 | 10 |
hair follicle cell | 7.22e-07 | 5 |
hair follicle dermal papilla cell | 8.72e-07 | 3 |
stem cell of epidermis | 8.72e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 2.97e-27 | 46 |
integumental system | 2.97e-27 | 46 |
skin of body | 7.92e-24 | 41 |
adipose tissue | 6.66e-17 | 14 |
connective tissue | 6.69e-15 | 371 |
dermis | 6.75e-13 | 9 |
dermatome | 6.75e-13 | 9 |
future dermis | 6.75e-13 | 9 |
surface structure | 3.51e-12 | 99 |
somite | 1.24e-11 | 71 |
presomitic mesoderm | 1.24e-11 | 71 |
presumptive segmental plate | 1.24e-11 | 71 |
dermomyotome | 1.24e-11 | 71 |
trunk paraxial mesoderm | 1.24e-11 | 71 |
paraxial mesoderm | 2.23e-11 | 72 |
presumptive paraxial mesoderm | 2.23e-11 | 72 |
dense mesenchyme tissue | 3.93e-11 | 73 |
epithelial vesicle | 5.29e-10 | 78 |
multilaminar epithelium | 6.22e-10 | 83 |
hair follicle | 7.22e-07 | 5 |
hair follicle placode | 7.22e-07 | 5 |
dermal papilla | 8.72e-07 | 3 |
papillary layer of dermis | 8.72e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.64e-11 | 5 |
myotonic disease | 1.64e-11 | 5 |
muscle tissue disease | 1.64e-11 | 5 |
myopathy | 1.64e-11 | 5 |
muscular disease | 1.64e-11 | 5 |
myotonic dystrophy | 1.64e-11 | 5 |