FFCP PHASE1:Hg19::chr2:31560770..31560779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:31560770..31560779,- | |||
|coexpression_cluster_id=C4221 | |||
|description=CAGE_peak_at_chr2:31560770..31560779,- | |description=CAGE_peak_at_chr2:31560770..31560779,- | ||
|id=chr2:31560770..31560779,- | |id=chr2:31560770..31560779,- | ||
|ontology_enrichment_celltype=CL:0002166!3.27e-18!3;CL:0002327!7.56e-14!4;CL:0000066!1.22e-11!254;CL:0002076!8.18e-09!43;CL:0002159!2.76e-07!13;CL:0000313!5.69e-07!1;CL:0000244!6.77e-07!4;CL:0000731!6.77e-07!4 | |ontology_enrichment_celltype=CL:0002166!3.27e-18!3;CL:0002327!7.56e-14!4;CL:0000066!1.22e-11!254;CL:0002076!8.18e-09!43;CL:0002159!2.76e-07!13;CL:0000313!5.69e-07!1;CL:0000244!6.77e-07!4;CL:0000731!6.77e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000244;3.00e-40;4!CL:0000731;3.00e-40;4!CL:0002535;3.81e-21;2!CL:0002166;1.40e-14;3!CL:0002327;3.60e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,4.05e-40,4;CL:0000731,4.05e-40,4;CL:0002535,3.81e-21,2;CL:0002166,1.22e-14,3;CL:0002327,3.42e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!9.52e-19!14;DOID:2152!5.69e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4362;2.74e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.74e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001911!7.56e-14!4;UBERON:0005333!7.56e-14!4;UBERON:0008425!7.56e-14!4;UBERON:0005311!7.56e-14!4;UBERON:0001708!8.60e-14!4;UBERON:0001704!8.60e-14!4;UBERON:0003343!1.11e-12!4;UBERON:0004785!1.11e-12!4;UBERON:0003729!2.99e-10!5;UBERON:0002090!2.38e-09!6;UBERON:0003129!1.39e-08!11;UBERON:0000075!2.86e-07!13;UBERON:0005944!2.86e-07!13;UBERON:0004288!2.86e-07!13;UBERON:0003089!2.86e-07!13;UBERON:0000076!3.85e-07!8;UBERON:0004911!5.69e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.84e-32;5!UBERON:0005910;2.91e-27;6!UBERON:0006955;3.81e-21;2!UBERON:0004801;3.81e-21;2!UBERON:0000486;3.25e-14;12!UBERON:0001708;2.80e-11;4!UBERON:0008895;2.80e-11;4!UBERON:0001911;3.60e-11;4!UBERON:0011159;2.74e-09;5!UBERON:0000002;5.92e-08;6!UBERON:0001560;5.92e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.34e-32,5;UBERON:0005910,3.55e-27,6;UBERON:0006955,3.81e-21,2;UBERON:0004801,3.81e-21,2;UBERON:0001708,2.53e-11,4;UBERON:0008895,2.53e-11,4;UBERON:0001911,3.42e-11,4;UBERON:0005333,3.42e-11,4;UBERON:0008425,3.42e-11,4;UBERON:0005311,3.42e-11,4;UBERON:0011159,2.53e-09,5;UBERON:0010188,5.54e-08,6;UBERON:0002539,5.54e-08,6;UBERON:0008816,5.54e-08,6;UBERON:0000002,5.92e-08,6;UBERON:0001560,5.92e-08,6 | |||
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|short_description=p@chr2:31560770..31560779,- | |short_description=p@chr2:31560770..31560779,- | ||
}} | }} |
Latest revision as of 09:36, 29 July 2015
Short description: | p@chr2:31560770..31560779, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:31560770..31560779, - |
Coexpression cluster: | C4221_epidermoid_large_Urothelial_Mammary_squamous_Mallassezderived_pagetoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 4.05e-40 | 4 |
urothelial cell | 4.05e-40 | 4 |
epithelial cell of cervix | 3.81e-21 | 2 |
epithelial cell of Malassez | 1.22e-14 | 3 |
mammary gland epithelial cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.34e-32 | 5 |
transitional epithelium | 3.55e-27 | 6 |
uterine epithelium | 3.81e-21 | 2 |
cervix epithelium | 3.81e-21 | 2 |
jaw skeleton | 2.53e-11 | 4 |
splanchnocranium | 2.53e-11 | 4 |
mammary gland | 3.42e-11 | 4 |
mammary bud | 3.42e-11 | 4 |
mammary ridge | 3.42e-11 | 4 |
mammary placode | 3.42e-11 | 4 |
primary subdivision of cranial skeletal system | 2.53e-09 | 5 |
protuberance | 5.54e-08 | 6 |
pharyngeal arch | 5.54e-08 | 6 |
embryonic head | 5.54e-08 | 6 |
uterine cervix | 5.92e-08 | 6 |
neck of organ | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.74e-09 | 5 |