FFCP PHASE1:Hg19::chr2:234959355..234959371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6694 | |EntrezGene=6694 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11256 | |HGNC=11256 | ||
|TSSclassifier=strong | |||
|UniProt=Q13103 | |UniProt=Q13103 | ||
|association_with_transcript=9bp_to_NM_006944,uc002vvk.1,uc010fyl.1_5end | |association_with_transcript=9bp_to_NM_006944,uc002vvk.1,uc010fyl.1_5end | ||
|cluster_id=chr2:234959355..234959371,+ | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_2_at_SPP2_5end | |description=CAGE_peak_2_at_SPP2_5end | ||
|id=chr2:234959355..234959371,+ | |id=chr2:234959355..234959371,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.10e-10!12;CL:0000417!1.10e-10!12;CL:0000668!1.10e-10!12;CL:0000414!1.10e-10!12;CL:0000412!1.10e-10!12;CL:0000182!1.10e-10!12 | |ontology_enrichment_celltype=CL:0000181!1.10e-10!12;CL:0000417!1.10e-10!12;CL:0000668!1.10e-10!12;CL:0000414!1.10e-10!12;CL:0000412!1.10e-10!12;CL:0000182!1.10e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.03e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.03e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.07e-11;11!UBERON:0009497;8.34e-10;13 | |||
|ontology_enrichment_disease=DOID:178!1.61e-14!1;DOID:326!1.61e-14!1;DOID:3978!1.61e-14!1;DOID:3394!1.61e-14!1;DOID:5844!1.61e-14!1;DOID:114!6.58e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!2.57e-18!26;UBERON:0002107!9.19e-18!19;UBERON:0006925!9.19e-18!19;UBERON:0008836!9.19e-18!19;UBERON:0008835!2.41e-15!22;UBERON:0003894!2.41e-15!22;UBERON:0005172!9.11e-15!55;UBERON:0005173!9.11e-15!55;UBERON:0009854!1.12e-14!23;UBERON:0007499!1.67e-13!25;UBERON:0009497!1.67e-13!25;UBERON:0000015!1.67e-13!25;UBERON:0002423!1.67e-13!25;UBERON:0006235!1.67e-13!25;UBERON:0004161!1.67e-13!25;UBERON:0002417!3.05e-13!61;UBERON:0000916!3.05e-13!61;UBERON:0009856!5.54e-13!26;UBERON:0002365!6.98e-11!31;UBERON:0002330!6.98e-11!31;UBERON:0002368!1.24e-09!35;UBERON:0000949!1.80e-07!45;UBERON:0005177!3.32e-07!107;UBERON:0009569!8.88e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.23e-37;19!UBERON:0006925;2.23e-37;19!UBERON:0002423;1.51e-28;25!UBERON:0002365;4.81e-23;31!UBERON:0002330;4.81e-23;31!UBERON:0002368;6.40e-20;33!UBERON:0000949;2.00e-14;43!UBERON:0005172;2.08e-10;52!UBERON:0005173;2.08e-10;52!UBERON:0002417;4.67e-08;58!UBERON:0000916;4.67e-08;58!UBERON:0002530;1.36e-07;57!UBERON:0001007;1.80e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.23e-37,19;UBERON:0006925,2.23e-37,19;UBERON:0008836,2.23e-37,19;UBERON:0008835,2.31e-32,22;UBERON:0003894,2.31e-32,22;UBERON:0009854,5.57e-31,23;UBERON:0007499,1.51e-28,25;UBERON:0009497,1.51e-28,25;UBERON:0000015,1.51e-28,25;UBERON:0002423,1.51e-28,25;UBERON:0006235,1.51e-28,25;UBERON:0004161,1.51e-28,25;UBERON:0009856,1.81e-27,26;UBERON:0002365,4.02e-23,31;UBERON:0002330,4.02e-23,31;UBERON:0002368,1.55e-20,35;UBERON:0000949,4.53e-16,45;UBERON:0003929,1.86e-13,54;UBERON:0005172,1.86e-13,54;UBERON:0005173,1.86e-13,54;UBERON:0002530,2.40e-12,59;UBERON:0002417,3.80e-12,60;UBERON:0000916,3.80e-12,60;UBERON:0005911,5.70e-09,82;UBERON:0001041,1.81e-08,87;UBERON:0005177,2.50e-07,101 | |||
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|short_description=p2@SPP2 | |short_description=p2@SPP2 | ||
}} | }} |
Latest revision as of 00:16, 16 September 2015
Short description: | p2@SPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPP2_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 9bp_to_NM_006944, uc002vvk.1, uc010fyl.1_5end |
EntrezGene: | SPP2 |
HGNC: | 11256 |
UniProt: | Q13103 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.03e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.23e-37 | 19 |
digestive gland | 2.23e-37 | 19 |
liver bud | 2.23e-37 | 19 |
hepatic diverticulum | 2.31e-32 | 22 |
liver primordium | 2.31e-32 | 22 |
digestive tract diverticulum | 5.57e-31 | 23 |
epithelial sac | 1.51e-28 | 25 |
epithelium of foregut-midgut junction | 1.51e-28 | 25 |
anatomical boundary | 1.51e-28 | 25 |
hepatobiliary system | 1.51e-28 | 25 |
foregut-midgut junction | 1.51e-28 | 25 |
septum transversum | 1.51e-28 | 25 |
sac | 1.81e-27 | 26 |
exocrine gland | 4.02e-23 | 31 |
exocrine system | 4.02e-23 | 31 |
endocrine gland | 1.55e-20 | 35 |
endocrine system | 4.53e-16 | 45 |
gut epithelium | 1.86e-13 | 54 |
abdomen element | 1.86e-13 | 54 |
abdominal segment element | 1.86e-13 | 54 |
gland | 2.40e-12 | 59 |
abdominal segment of trunk | 3.80e-12 | 60 |
abdomen | 3.80e-12 | 60 |
endo-epithelium | 5.70e-09 | 82 |
foregut | 1.81e-08 | 87 |
trunk region element | 2.50e-07 | 101 |