FFCP PHASE1:Hg19::chr2:234590556..234590568,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54577 | |EntrezGene=54577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12539 | |HGNC=12539 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HAW7,Q5DSZ7 | |UniProt=Q9HAW7,Q5DSZ7 | ||
|association_with_transcript=-15bp_to_ENST00000373426,NM_019077,uc002vut.2,uc010zmx.1_5end | |association_with_transcript=-15bp_to_ENST00000373426,NM_019077,uc002vut.2,uc010zmx.1_5end | ||
|cluster_id=chr2:234590556..234590568,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_2_at_UGT1A7_5end | |description=CAGE_peak_2_at_UGT1A7_5end | ||
|id=chr2:234590556..234590568,+ | |id=chr2:234590556..234590568,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.76e-12!3;CL:0000861!1.76e-12!3 | |ontology_enrichment_celltype=CL:0002150!1.76e-12!3;CL:0000861!1.76e-12!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.53e-21;1!UBERON:0008814;2.23e-11;2!UBERON:0010056;2.23e-11;2!UBERON:0008947;9.89e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.28e-08!106;DOID:0050687!4.48e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001557!1.05e-30!19;UBERON:0001737!7.76e-30!9;UBERON:0000072!1.42e-15!46;UBERON:0000065!4.29e-13!53;UBERON:0001041!1.61e-11!98;UBERON:0001004!2.70e-10!72;UBERON:0004921!9.83e-10!129;UBERON:0004185!9.83e-10!129;UBERON:0008947!1.25e-09!38;UBERON:0003258!1.25e-09!38;UBERON:0000063!5.57e-09!97;UBERON:0000077!1.23e-08!130;UBERON:0004457!1.52e-08!12;UBERON:0000042!1.52e-08!12;UBERON:0001007!2.49e-07!155;UBERON:0001555!2.49e-07!155;UBERON:0007026!2.49e-07!155;UBERON:0001042!2.85e-07!10;UBERON:0009145!2.85e-07!10;UBERON:0001723!4.33e-07!3;UBERON:0001033!4.33e-07!3;UBERON:0010056!4.33e-07!3;UBERON:0003688!8.59e-07!6;UBERON:0002358!8.59e-07!6;UBERON:0003684!8.59e-07!6;UBERON:0001178!8.59e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.55e-27;3!UBERON:0001033;2.55e-27;3!UBERON:0002372;1.88e-21;1!UBERON:0001961;1.88e-21;1!UBERON:0001744;1.88e-21;1!UBERON:0001042;1.88e-21;1!UBERON:0001735;1.88e-21;1!UBERON:0006562;2.02e-11;2!UBERON:0000341;2.47e-11;2!UBERON:0003127;3.89e-11;2!UBERON:0001043;4.52e-08;3!UBERON:0000165;4.88e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.08e-27,3;UBERON:0001033,2.08e-27,3;UBERON:0010056,2.08e-27,3;UBERON:0002372,1.88e-21,1;UBERON:0001961,1.88e-21,1;UBERON:0001744,1.88e-21,1;UBERON:0001735,1.88e-21,1;UBERON:0001042,1.28e-18,10;UBERON:0009145,1.28e-18,10;UBERON:0001557,4.27e-17,19;UBERON:0006562,5.40e-17,11;UBERON:0000072,4.14e-15,47;UBERON:0001041,3.08e-14,87;UBERON:0000065,3.80e-13,54;UBERON:0000341,2.47e-11,2;UBERON:0003127,3.70e-11,2;UBERON:0004921,2.60e-10,118;UBERON:0001004,1.43e-09,74;UBERON:0000166,8.03e-09,22;UBERON:0001007,2.53e-08,145;UBERON:0001555,2.53e-08,145;UBERON:0007026,2.53e-08,145;UBERON:0001043,4.52e-08,3;UBERON:0009143,4.52e-08,3;UBERON:0004119,1.67e-07,160;UBERON:0000925,1.67e-07,160;UBERON:0006595,1.67e-07,160;UBERON:0000165,7.93e-07,29;UBERON:0000930,7.93e-07,29 | |||
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| ||
|short_description=p2@UGT1A7 | |short_description=p2@UGT1A7 | ||
}} | }} |
Latest revision as of 23:26, 15 September 2015
Short description: | p2@UGT1A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UGT1A7_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -15bp_to_ENST00000373426, NM_019077, uc002vut.2, uc010zmx.1_5end |
EntrezGene: | UGT1A7 |
HGNC: | 12539 |
UniProt: | Q9HAW7Q5DSZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.08e-27 | 3 |
gustatory system | 2.08e-27 | 3 |
future tongue | 2.08e-27 | 3 |
tonsil | 1.88e-21 | 1 |
mucosa-associated lymphoid tissue | 1.88e-21 | 1 |
lymphoid tissue | 1.88e-21 | 1 |
tonsillar ring | 1.88e-21 | 1 |
chordate pharynx | 1.28e-18 | 10 |
pharyngeal region of foregut | 1.28e-18 | 10 |
upper respiratory tract | 4.27e-17 | 19 |
pharynx | 5.40e-17 | 11 |
segment of respiratory tract | 4.14e-15 | 47 |
foregut | 3.08e-14 | 87 |
respiratory tract | 3.80e-13 | 54 |
throat | 2.47e-11 | 2 |
open tracheal system trachea | 3.70e-11 | 2 |
subdivision of digestive tract | 2.60e-10 | 118 |
respiratory system | 1.43e-09 | 74 |
oral opening | 8.03e-09 | 22 |
digestive system | 2.53e-08 | 145 |
digestive tract | 2.53e-08 | 145 |
primitive gut | 2.53e-08 | 145 |
esophagus | 4.52e-08 | 3 |
esophageal region | 4.52e-08 | 3 |
endoderm-derived structure | 1.67e-07 | 160 |
endoderm | 1.67e-07 | 160 |
presumptive endoderm | 1.67e-07 | 160 |
mouth | 7.93e-07 | 29 |
stomodeum | 7.93e-07 | 29 |