FFCP PHASE1:Hg19::chr18:72168431..72168467,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:72168431..72168467,+ | |||
|coexpression_cluster_id=C1555 | |||
|description=CAGE_peak_at_chr18:72168431..72168467,+ | |description=CAGE_peak_at_chr18:72168431..72168467,+ | ||
|id=chr18:72168431..72168467,+ | |id=chr18:72168431..72168467,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.89e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.35e-66;2!UBERON:0005754;7.05e-34;1!UBERON:0003918;3.36e-14;10!UBERON:0007687;3.36e-14;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!7.87e-15!3;UBERON:0004054!7.87e-15!3;UBERON:0007023!3.72e-14!115;UBERON:0005904!3.12e-11!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.58e-98;3!UBERON:0004054;3.58e-98;3!UBERON:0005904;6.21e-74;4!UBERON:0005795;1.84e-34;1!UBERON:0001301;3.05e-34;1!UBERON:0001000;7.05e-34;1!UBERON:0000998;7.05e-34;1!UBERON:0006868;7.05e-34;1!UBERON:0005352;7.05e-34;1!UBERON:0000058;3.23e-30;10!UBERON:0003135;1.47e-27;11!UBERON:0004175;7.36e-15;21!UBERON:0003101;3.20e-14;22!UBERON:0000079;3.20e-14;22!UBERON:0003124;2.89e-12;3!UBERON:0000920;2.89e-12;3!UBERON:0002050;5.35e-08;5!UBERON:0005423;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.03e-98,3;UBERON:0004054,3.03e-98,3;UBERON:0005904,5.48e-74,4;UBERON:0001301,3.61e-34,1;UBERON:0000998,5.05e-34,1;UBERON:0006868,5.05e-34,1;UBERON:0001000,7.06e-34,1;UBERON:0005352,7.06e-34,1;UBERON:0003135,1.40e-27,11;UBERON:0000058,2.39e-16,19;UBERON:0000080,1.13e-15,9;UBERON:0002120,1.13e-15,9;UBERON:0004875,1.13e-15,9;UBERON:0005721,1.13e-15,9;UBERON:0005754,1.13e-15,9;UBERON:0007297,1.13e-15,9;UBERON:0003101,3.13e-14,22;UBERON:0000079,3.13e-14,22;UBERON:0004876,5.10e-13,11;UBERON:0004175,1.28e-12,25;UBERON:0000920,3.24e-12,3;UBERON:0002113,3.25e-12,26;UBERON:0003918,3.25e-12,26;UBERON:0011143,3.25e-12,26;UBERON:0005095,3.25e-12,26;UBERON:0007687,3.25e-12,26;UBERON:0003887,5.08e-12,12;UBERON:0000489,2.29e-10,31;UBERON:0006554,4.50e-07,47;UBERON:0001008,6.12e-07,48;UBERON:0003133,6.51e-07,48 | |||
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| ||
|short_description=p@chr18:72168431..72168467,+ | |short_description=p@chr18:72168431..72168467,+ | ||
}} | }} |
Latest revision as of 02:07, 26 July 2015
Short description: | p@chr18:72168431..72168467, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:72168431..72168467, + |
Coexpression cluster: | C1555_epididymis_kidney_seminal_ductus_uterus_colon_Cardiac |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.03e-98 | 3 |
internal male genitalia | 3.03e-98 | 3 |
duct of male reproductive system | 5.48e-74 | 4 |
epididymis | 3.61e-34 | 1 |
seminal vesicle | 5.05e-34 | 1 |
seminal fluid secreting gland | 5.05e-34 | 1 |
vas deferens | 7.06e-34 | 1 |
spermatic cord | 7.06e-34 | 1 |
male reproductive organ | 1.40e-27 | 11 |
duct | 2.39e-16 | 19 |
mesonephros | 1.13e-15 | 9 |
pronephros | 1.13e-15 | 9 |
nephrogenic cord | 1.13e-15 | 9 |
pronephric mesoderm | 1.13e-15 | 9 |
rostral part of nephrogenic cord | 1.13e-15 | 9 |
presumptive pronephric mesoderm | 1.13e-15 | 9 |
male organism | 3.13e-14 | 22 |
male reproductive system | 3.13e-14 | 22 |
urogenital ridge | 5.10e-13 | 11 |
internal genitalia | 1.28e-12 | 25 |
egg chorion | 3.24e-12 | 3 |
kidney | 3.25e-12 | 26 |
kidney mesenchyme | 3.25e-12 | 26 |
upper urinary tract | 3.25e-12 | 26 |
kidney rudiment | 3.25e-12 | 26 |
kidney field | 3.25e-12 | 26 |
intraembryonic coelom | 5.08e-12 | 12 |
cavitated compound organ | 2.29e-10 | 31 |
urinary system structure | 4.50e-07 | 47 |
renal system | 6.12e-07 | 48 |
reproductive organ | 6.51e-07 | 48 |