FFCP PHASE1:Hg19::chr2:227771390..227771397,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84236 | |EntrezGene=84236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23081 | |HGNC=23081 | ||
|TSSclassifier=strong | |||
|UniProt=B9A054 | |UniProt=B9A054 | ||
|association_with_transcript=-30bp_to_ENST00000409053_5end | |association_with_transcript=-30bp_to_ENST00000409053_5end | ||
|cluster_id=chr2:227771390..227771397,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_7_at_RHBDD1_5end | |description=CAGE_peak_7_at_RHBDD1_5end | ||
|id=chr2:227771390..227771397,+ | |id=chr2:227771390..227771397,+ | ||
|ontology_enrichment_celltype=CL:0000819!8.72e-18!1;CL:0000785!1.44e-09!2;CL:0000955!1.44e-09!2;CL:0000818!1.44e-09!2;CL:0000954!1.44e-09!2;CL:0000816!1.44e-09!2;CL:0000542!7.14e-08!53;CL:0000051!7.14e-08!53;CL:0000945!8.59e-07!24;CL:0000826!8.59e-07!24;CL:0000817!8.62e-07!3 | |ontology_enrichment_celltype=CL:0000819!8.72e-18!1;CL:0000785!1.44e-09!2;CL:0000955!1.44e-09!2;CL:0000818!1.44e-09!2;CL:0000954!1.44e-09!2;CL:0000816!1.44e-09!2;CL:0000542!7.14e-08!53;CL:0000051!7.14e-08!53;CL:0000945!8.59e-07!24;CL:0000826!8.59e-07!24;CL:0000817!8.62e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:12603!5.26e-18!1;DOID:0060073!8.72e-18!1;DOID:8675!8.72e-18!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.47e-38!7;UBERON:0002106!1.56e-22!3;UBERON:0004854!1.56e-22!3;UBERON:0009034!1.56e-22!3;UBERON:0002095!1.56e-22!3;UBERON:0004782!1.56e-22!3;UBERON:0003281!1.56e-22!3;UBERON:0009664!1.56e-22!3;UBERON:0002296!1.56e-22!3;UBERON:0005602!1.56e-22!3;UBERON:0001179!1.56e-22!3;UBERON:0006293!1.56e-22!3;UBERON:0002370!6.79e-18!4;UBERON:0005058!6.79e-18!4;UBERON:0009113!6.79e-18!4;UBERON:0003295!6.79e-18!4;UBERON:0005562!6.79e-18!4;UBERON:0003351!2.91e-12!6;UBERON:0005057!1.60e-10!26;UBERON:0001875!1.57e-09!2;UBERON:0006514!1.57e-09!2;UBERON:0000945!4.54e-09!8;UBERON:0010039!4.54e-09!8;UBERON:0000974!1.02e-07!10;UBERON:0003408!1.02e-07!10;UBERON:0001042!1.02e-07!10;UBERON:0009145!1.02e-07!10;UBERON:0006562!4.30e-07!11;UBERON:0009722!4.30e-07!11;UBERON:0007690!4.30e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.98e-131;2!UBERON:0005058;8.98e-131;2!UBERON:0009113;8.98e-131;2!UBERON:0004177;2.86e-53;5!UBERON:0005057;2.86e-53;5!UBERON:0000077;6.56e-11;27!UBERON:0002405;6.56e-11;27!UBERON:0002368;2.51e-07;33!UBERON:0002390;2.51e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.40e-66,4;UBERON:0005058,2.40e-66,4;UBERON:0009113,2.40e-66,4;UBERON:0003295,2.40e-66,4;UBERON:0005562,2.40e-66,4;UBERON:0003351,9.76e-45,6;UBERON:0004177,1.49e-38,7;UBERON:0005057,1.49e-38,7;UBERON:0000974,2.08e-27,10;UBERON:0003408,2.08e-27,10;UBERON:0001042,2.08e-27,10;UBERON:0009145,2.08e-27,10;UBERON:0006562,4.86e-25,11;UBERON:0009722,4.86e-25,11;UBERON:0007690,4.86e-25,11;UBERON:0008814,8.40e-16,18;UBERON:0001557,4.91e-15,19;UBERON:0004807,1.40e-10,28;UBERON:0000077,2.96e-10,29;UBERON:0002368,1.09e-08,35;UBERON:0000949,5.42e-07,45;UBERON:0000072,9.72e-07,47 | |||
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|short_description=p7@RHBDD1 | |short_description=p7@RHBDD1 | ||
}} | }} |
Latest revision as of 03:27, 25 September 2015
Short description: | p7@RHBDD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RHBDD1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -30bp_to_ENST00000409053_5end |
EntrezGene: | RHBDD1 |
HGNC: | 23081 |
UniProt: | B9A054 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.40e-66 | 4 |
hemolymphoid system gland | 2.40e-66 | 4 |
thymic region | 2.40e-66 | 4 |
pharyngeal gland | 2.40e-66 | 4 |
thymus primordium | 2.40e-66 | 4 |
pharyngeal epithelium | 9.76e-45 | 6 |
hemopoietic organ | 1.49e-38 | 7 |
immune organ | 1.49e-38 | 7 |
neck | 2.08e-27 | 10 |
gland of gut | 2.08e-27 | 10 |
chordate pharynx | 2.08e-27 | 10 |
pharyngeal region of foregut | 2.08e-27 | 10 |
pharynx | 4.86e-25 | 11 |
entire pharyngeal arch endoderm | 4.86e-25 | 11 |
early pharyngeal endoderm | 4.86e-25 | 11 |
pharyngeal arch system | 8.40e-16 | 18 |
upper respiratory tract | 4.91e-15 | 19 |
respiratory system epithelium | 1.40e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 2.96e-10 | 29 |
endocrine gland | 1.09e-08 | 35 |
endocrine system | 5.42e-07 | 45 |
segment of respiratory tract | 9.72e-07 | 47 |