FFCP PHASE1:Hg19::chr18:56246303..56246344,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=0bp_to_AY044450_5end | |association_with_transcript=0bp_to_AY044450_5end | ||
|cluster_id=chr18:56246303..56246344,- | |||
|coexpression_cluster_id=C1324 | |||
|description=CAGE_peak_9_at_ALPK2_5end | |description=CAGE_peak_9_at_ALPK2_5end | ||
|id=chr18:56246303..56246344,- | |id=chr18:56246303..56246344,- | ||
|ontology_enrichment_celltype=CL:0000057!3.92e-16!75;CL:0000055!1.24e-15!180;CL:0000077!4.56e-13!19;CL:0002334!3.73e-09!12;CL:0002620!5.42e-09!23;CL:0000548!5.85e-08!679;CL:0000004!5.85e-08!679;CL:0000255!5.85e-08!679;CL:0000012!1.07e-07!682 | |ontology_enrichment_celltype=CL:0000057!3.92e-16!75;CL:0000055!1.24e-15!180;CL:0000077!4.56e-13!19;CL:0002334!3.73e-09!12;CL:0002620!5.42e-09!23;CL:0000548!5.85e-08!679;CL:0000004!5.85e-08!679;CL:0000255!5.85e-08!679;CL:0000012!1.07e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.99e-19;23!CL:0000077;2.29e-13;19!CL:0002580;9.15e-08;3!CL:0002579;1.30e-07;3!CL:0002605;3.55e-07;3!CL:0002622;3.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.54e-19,23;CL:0000057,6.07e-15,76;CL:0000077,2.41e-13,19;CL:0002580,6.85e-08,3;CL:0002579,6.85e-08,3;CL:0000219,1.09e-07,386;CL:0002622,2.98e-07,3;CL:0000134,4.73e-07,354;CL:0002605,5.19e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.24e-07!5;DOID:450!5.24e-07!5;DOID:66!5.24e-07!5;DOID:423!5.24e-07!5;DOID:0080000!5.24e-07!5;DOID:11722!5.24e-07!5 | |ontology_enrichment_disease=DOID:17!5.24e-07!5;DOID:450!5.24e-07!5;DOID:66!5.24e-07!5;DOID:423!5.24e-07!5;DOID:0080000!5.24e-07!5;DOID:11722!5.24e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;4.27e-13;5!DOID:450;4.27e-13;5!DOID:66;4.27e-13;5!DOID:423;4.27e-13;5!DOID:0080000;4.27e-13;5!DOID:11722;4.27e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.72e-13,5;DOID:450,3.72e-13,5;DOID:66,3.72e-13,5;DOID:423,3.72e-13,5;DOID:0080000,3.72e-13,5;DOID:11722,3.72e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!7.97e-07!45;UBERON:0002416!7.97e-07!45;UBERON:0002097!8.00e-07!40 | |ontology_enrichment_uberon=UBERON:0002199!7.97e-07!45;UBERON:0002416!7.97e-07!45;UBERON:0002097!8.00e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.04e-11;9!UBERON:0000042;4.04e-11;9!UBERON:0002097;6.33e-11;41!UBERON:0003688;3.37e-09;6!UBERON:0002358;3.37e-09;6!UBERON:0003684;3.37e-09;6!UBERON:0001178;3.37e-09;6!UBERON:0002199;2.71e-08;46!UBERON:0002416;2.71e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.56e-13,41;UBERON:0002199,1.46e-11,46;UBERON:0002416,1.46e-11,46;UBERON:0003688,2.41e-09,6;UBERON:0002358,2.41e-09,6;UBERON:0003684,2.41e-09,6;UBERON:0001178,2.41e-09,6;UBERON:0004457,4.03e-08,12;UBERON:0000042,4.03e-08,12;UBERON:0002384,4.38e-08,371;UBERON:0003102,5.30e-07,99 | |||
|phase1_expression=0.54503513781167,1.07050261945492,1.69145284915165,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0.984968464614303,0.204000691244253,0.626909442956176,1.43117993565528,1.36874425072884,2.00868223351684,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0.47296445977717,0,0,0,0,0,0.224723484445085,0.306083892370903,0.641858054152187,1.27867425159808,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0.65156653411535,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.434539556882471,1.5905718941022,0,0,0,0.43917392846563,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.379891534993739,12.8436905388822,0.573673241497627,0.354668382198357,3.36406560085384,0,0.74000264525148,0.311211035399766,0,0,0.302714855289863,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,1.31693286264251,7.04921930337745,0.45071417671979,0.226864366320042,14.1717812194201,2.77624605464138,6.56988893594642,10.8032794590385,4.12210116953756,10.0479810617795,4.09457083929498,4.38818463827292,2.04617710838517,27.0104138441203,10.8618880397913,0,21.6555851435135,8.06016785821122,1.69560592310488,0,0,0,0,0,0,0,0,0,3.12899064659632,3.85944562915731,0,0,0,0.473227200159376,0.505754070234305,0.482022059766964,0.441175890929576,0.217879444092406,0.237270619111097,0.674156540800822,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0.671928512795438,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,2.19761916788222,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,2.71295439353627,4.35766729300147,6.79816340037988,0,0,0,1.67737398844108,2.29723871668228,0,0.723906533337896,0.61642896765115,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,2.07970861530807,3.21172179834891,1.10391690523754,2.45996971484698,0,0,0,0.664225598535437,0,2.17209036170207,0,0,0,0,0,0,0,0,2.23297027036899,7.366174717827,1.96462066103151,2.94720043288112,3.58195074346692,1.93024705372329,0,0.771048469013278,0.710246901252508,0.492762936082855,0.519254429183621,0.348631135379878,0,0,0,1.14814448164607,1.82091168006717,2.62248829918848,0,0.0770153371044148,0,0,1.68882606228601,0,0,0,0,0,1.50506932156456,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0.386682873168488,0,0,0.413509717453592,0.107420244868274,0.145016693914229,0.255679882248303,0.890320356467374,0,0,0,0,1.85938219718914,3.77774816196768,0,0,0,0,0,0.143124886741991,0.744316738719335,0.949138274156178,2.85945290885737,0,0,0,0,0.179872457583315,0.823611089208164,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.196498082026242,0,0,1.05553817648832,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0.852408440419239,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,1.55519793830904,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3209787098083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0.480952921509202,0,0.599428828746391,0,0,0,0,0,0,3.94122197613481,3.24268823568233,0.407992870545287,0.288950589901519,0,0,0,0,0,0.837847203816763,0.458320848023367,0,0.199679000498991,0,0.223171457441873,0.201550417460179,0.360299883542404,0,0,0,0.13480708770837,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0.316801009558219,0.537862017998534,0,0,0,0,0,0,0,0,0,1.87426823963964,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0.447764408660622,1.16856654923612,0,0.189403005275089,0,0,0,0.604923695052956,0.466311601748341,0,0.477890301491107,0,0.465788870628778,0,0.53168342911599,1.04349012362347,1.80309130796662,2.66563648518157,1.22061219961398,1.45478927362048,0.214821114084977,0.928067519756987,1.59238355479446,0.800055529326307,1.71697852591396,4.37774335395695,0,0,3.64550705337374,0.260994291965212,2.26705925512272,0.231522474323834,1.22368352253234,3.04451029838529,0,4.82424909073156,0.176689145945881,3.27953865060555,0.844712203265363,2.56241518587947,0.345430341731199,0.911579868532147,0,19.8757515016176,27.9016164658062,19.4642819164455,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0.636008701306837,0,0,1.76337971845342,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,1.61364054962816,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0.205325613712494,0,0.9714219861182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| ||
|short_description=p9@ALPK2 | |short_description=p9@ALPK2 | ||
}} | }} |
Latest revision as of 00:02, 20 September 2015
Short description: | p9@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ALPK2_5end |
Coexpression cluster: | C1324_Fibroblast_Preadipocyte_basal_migratory_mesenchymal_Smooth_spindle |
Association with transcript: | 0bp_to_AY044450_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.54e-19 | 23 |
fibroblast | 6.07e-15 | 76 |
mesothelial cell | 2.41e-13 | 19 |
preadipocyte of the breast | 6.85e-08 | 3 |
omentum preadipocyte | 6.85e-08 | 3 |
motile cell | 1.09e-07 | 386 |
prostate stromal cell | 2.98e-07 | 3 |
mesenchymal cell | 4.73e-07 | 354 |
astrocyte of the cerebral cortex | 5.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.56e-13 | 41 |
integument | 1.46e-11 | 46 |
integumental system | 1.46e-11 | 46 |
omentum | 2.41e-09 | 6 |
peritoneum | 2.41e-09 | 6 |
abdominal cavity | 2.41e-09 | 6 |
visceral peritoneum | 2.41e-09 | 6 |
cavity lining | 4.03e-08 | 12 |
serous membrane | 4.03e-08 | 12 |
connective tissue | 4.38e-08 | 371 |
surface structure | 5.30e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.72e-13 | 5 |
myotonic disease | 3.72e-13 | 5 |
muscle tissue disease | 3.72e-13 | 5 |
myopathy | 3.72e-13 | 5 |
muscular disease | 3.72e-13 | 5 |
myotonic dystrophy | 3.72e-13 | 5 |