FFCP PHASE1:Hg19::chr18:47088419..47088437,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9388 | |EntrezGene=9388 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6623 | |HGNC=6623 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5X9,B4DTR8 | |UniProt=Q9Y5X9,B4DTR8 | ||
|association_with_transcript=0bp_to_ENST00000261292,ENST00000427224,NM_006033,uc002ldu.1,uc002ldv.2,uc010xdh.1_5end | |association_with_transcript=0bp_to_ENST00000261292,ENST00000427224,NM_006033,uc002ldu.1,uc002ldv.2,uc010xdh.1_5end | ||
|cluster_id=chr18:47088419..47088437,+ | |||
|description=CAGE_peak_1_at_LIPG_5end | |description=CAGE_peak_1_at_LIPG_5end | ||
|id=chr18:47088419..47088437,+ | |id=chr18:47088419..47088437,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.24e-27!248;CL:0000220!1.53e-27!246;CL:0000222!1.03e-19!119;CL:0000066!5.80e-17!254;CL:0000183!2.87e-14!59;CL:0000393!2.23e-13!60;CL:0000211!2.23e-13!60;CL:0000187!3.00e-13!54;CL:0000680!9.58e-13!57;CL:0000056!9.58e-13!57;CL:0000355!9.58e-13!57;CL:0000192!6.92e-12!42;CL:0000514!6.92e-12!42;CL:0002139!7.96e-12!24;CL:0000115!7.38e-11!35;CL:0002078!1.18e-10!44;CL:0000359!7.34e-10!32;CL:0000071!1.40e-09!18;CL:0002546!1.40e-09!18;CL:1000449!4.64e-09!16;CL:1000497!9.83e-09!18;CL:0002518!9.83e-09!18;CL:0002494!5.89e-08!16;CL:0000213!2.50e-07!57;CL:0000215!2.50e-07!57;CL:0002681!3.12e-07!13;CL:0002584!3.12e-07!13;CL:1000507!4.20e-07!12;CL:1000494!4.20e-07!12;CL:0000055!9.20e-07!180 | |ontology_enrichment_celltype=CL:0002321!1.24e-27!248;CL:0000220!1.53e-27!246;CL:0000222!1.03e-19!119;CL:0000066!5.80e-17!254;CL:0000183!2.87e-14!59;CL:0000393!2.23e-13!60;CL:0000211!2.23e-13!60;CL:0000187!3.00e-13!54;CL:0000680!9.58e-13!57;CL:0000056!9.58e-13!57;CL:0000355!9.58e-13!57;CL:0000192!6.92e-12!42;CL:0000514!6.92e-12!42;CL:0002139!7.96e-12!24;CL:0000115!7.38e-11!35;CL:0002078!1.18e-10!44;CL:0000359!7.34e-10!32;CL:0000071!1.40e-09!18;CL:0002546!1.40e-09!18;CL:1000449!4.64e-09!16;CL:1000497!9.83e-09!18;CL:0002518!9.83e-09!18;CL:0002494!5.89e-08!16;CL:0000213!2.50e-07!57;CL:0000215!2.50e-07!57;CL:0002681!3.12e-07!13;CL:0002584!3.12e-07!13;CL:1000507!4.20e-07!12;CL:1000494!4.20e-07!12;CL:0000055!9.20e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.84e-12;24!CL:0000115;3.03e-10;36!CL:0000071;4.63e-10;18!CL:1000449;4.82e-10;15!CL:0000359;5.27e-10;32!CL:1000497;1.29e-09;17!CL:0002518;1.29e-09;17!CL:0000192;8.56e-09;43!CL:0002494;2.65e-08;16!CL:0002681;4.43e-08;12!CL:0002584;4.43e-08;12!CL:0000187;7.74e-08;55!CL:0000393;1.56e-07;61!CL:0000211;1.56e-07;61!CL:0002078;1.65e-07;45!CL:1000507;2.93e-07;10!CL:1000494;2.93e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.16e-28,250;CL:0000222,3.16e-20,121;CL:0000066,9.28e-17,253;CL:0000393,3.81e-14,61;CL:0000211,3.81e-14,61;CL:0000187,5.35e-14,55;CL:0000680,3.41e-13,58;CL:0000056,3.41e-13,58;CL:0000355,3.41e-13,58;CL:0002139,1.82e-12,24;CL:0000192,2.06e-12,43;CL:0000514,2.06e-12,43;CL:0000115,8.30e-12,36;CL:0002078,1.85e-11,45;CL:0000359,1.67e-10,32;CL:0000071,4.43e-10,18;CL:0002546,4.43e-10,18;CL:1000449,4.89e-10,15;CL:1000497,1.31e-09,17;CL:0002518,1.31e-09,17;CL:0002494,2.35e-08,16;CL:0002681,4.50e-08,12;CL:0002584,4.50e-08,12;CL:0000213,2.79e-07,58;CL:0000215,2.79e-07,58;CL:1000507,2.94e-07,10;CL:1000494,2.94e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;4.63e-10;18!CL:0000514;8.56e-09;43!CL:0000355;4.03e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!2.84e-39!309;UBERON:0000119!4.09e-39!312;UBERON:0003914!9.94e-33!118;UBERON:0000490!2.05e-27!138;UBERON:0004111!3.73e-26!241;UBERON:0000025!1.41e-25!194;UBERON:0002049!9.75e-22!79;UBERON:0007798!9.75e-22!79;UBERON:0004872!3.36e-21!84;UBERON:0000477!2.37e-20!286;UBERON:0000468!2.52e-20!659;UBERON:0005256!3.11e-20!143;UBERON:0000922!4.68e-20!612;UBERON:0000055!5.32e-20!69;UBERON:0000467!1.01e-19!625;UBERON:0000480!2.08e-19!626;UBERON:0002100!4.57e-19!216;UBERON:0001981!1.55e-18!60;UBERON:0007500!1.55e-18!60;UBERON:0004537!1.55e-18!60;UBERON:0006965!1.55e-18!60;UBERON:0000481!2.22e-18!347;UBERON:0002050!2.41e-18!605;UBERON:0005423!2.41e-18!605;UBERON:0000923!3.43e-18!604;UBERON:0005291!3.43e-18!604;UBERON:0006598!3.43e-18!604;UBERON:0002532!3.43e-18!604;UBERON:0000475!2.58e-16!365;UBERON:0001637!3.10e-15!42;UBERON:0003509!3.10e-15!42;UBERON:0004572!3.10e-15!42;UBERON:0004535!5.07e-15!110;UBERON:0001009!5.82e-14!113;UBERON:0006554!2.30e-13!44;UBERON:0003104!6.90e-13!238;UBERON:0009142!6.90e-13!238;UBERON:0009569!8.85e-13!113;UBERON:0003103!1.36e-12!69;UBERON:0001008!1.54e-12!45;UBERON:0001134!1.69e-12!61;UBERON:0002036!1.69e-12!61;UBERON:0003082!1.69e-12!61;UBERON:0002385!1.79e-12!63;UBERON:0001015!1.79e-12!63;UBERON:0000383!1.79e-12!63;UBERON:0002417!5.52e-12!61;UBERON:0000916!5.52e-12!61;UBERON:0004573!9.02e-12!33;UBERON:0004571!9.02e-12!33;UBERON:0000486!1.02e-11!82;UBERON:0005172!1.20e-11!55;UBERON:0005173!1.20e-11!55;UBERON:0000466!1.66e-10!126;UBERON:0001986!1.40e-09!18;UBERON:0004638!1.40e-09!18;UBERON:0004852!1.40e-09!18;UBERON:0000080!1.61e-09!18;UBERON:0002120!1.61e-09!18;UBERON:0004875!1.61e-09!18;UBERON:0005721!1.61e-09!18;UBERON:0005754!1.61e-09!18;UBERON:0007297!1.61e-09!18;UBERON:0005911!1.62e-09!82;UBERON:0004290!1.71e-09!70;UBERON:0002113!2.05e-09!27;UBERON:0003918!2.05e-09!27;UBERON:0005095!2.05e-09!27;UBERON:0007687!2.05e-09!27;UBERON:0000489!2.17e-09!32;UBERON:0005177!3.80e-09!107;UBERON:0004211!4.64e-09!16;UBERON:0001285!4.64e-09!16;UBERON:0007684!4.64e-09!16;UBERON:0003220!4.64e-09!16;UBERON:0004208!4.64e-09!16;UBERON:0006555!5.47e-09!17;UBERON:0005103!5.47e-09!17;UBERON:0000083!5.47e-09!17;UBERON:0009201!5.47e-09!17;UBERON:0004819!5.47e-09!17;UBERON:0006553!5.47e-09!17;UBERON:0003074!5.47e-09!17;UBERON:0003060!5.47e-09!17;UBERON:0004876!6.78e-09!20;UBERON:0003929!8.61e-09!54;UBERON:0000058!8.66e-09!26;UBERON:0003064!8.69e-09!37;UBERON:0000487!2.59e-08!22;UBERON:0000353!3.59e-08!17;UBERON:0001048!3.75e-08!168;UBERON:0000947!5.76e-08!21;UBERON:0010191!5.76e-08!21;UBERON:0000914!7.40e-08!83;UBERON:0002329!7.40e-08!83;UBERON:0003077!7.40e-08!83;UBERON:0003059!7.40e-08!83;UBERON:0007282!7.40e-08!83;UBERON:0009618!7.40e-08!83;UBERON:0007285!7.40e-08!83;UBERON:0003887!1.40e-07!21;UBERON:0000926!3.10e-07!448;UBERON:0004120!3.10e-07!448;UBERON:0006603!3.10e-07!448;UBERON:0001225!3.12e-07!13;UBERON:0008987!3.12e-07!13;UBERON:0009773!4.20e-07!12;UBERON:0001231!4.20e-07!12;UBERON:0004810!4.20e-07!12;UBERON:0003886!9.66e-07!63 | |ontology_enrichment_uberon=UBERON:0000483!2.84e-39!309;UBERON:0000119!4.09e-39!312;UBERON:0003914!9.94e-33!118;UBERON:0000490!2.05e-27!138;UBERON:0004111!3.73e-26!241;UBERON:0000025!1.41e-25!194;UBERON:0002049!9.75e-22!79;UBERON:0007798!9.75e-22!79;UBERON:0004872!3.36e-21!84;UBERON:0000477!2.37e-20!286;UBERON:0000468!2.52e-20!659;UBERON:0005256!3.11e-20!143;UBERON:0000922!4.68e-20!612;UBERON:0000055!5.32e-20!69;UBERON:0000467!1.01e-19!625;UBERON:0000480!2.08e-19!626;UBERON:0002100!4.57e-19!216;UBERON:0001981!1.55e-18!60;UBERON:0007500!1.55e-18!60;UBERON:0004537!1.55e-18!60;UBERON:0006965!1.55e-18!60;UBERON:0000481!2.22e-18!347;UBERON:0002050!2.41e-18!605;UBERON:0005423!2.41e-18!605;UBERON:0000923!3.43e-18!604;UBERON:0005291!3.43e-18!604;UBERON:0006598!3.43e-18!604;UBERON:0002532!3.43e-18!604;UBERON:0000475!2.58e-16!365;UBERON:0001637!3.10e-15!42;UBERON:0003509!3.10e-15!42;UBERON:0004572!3.10e-15!42;UBERON:0004535!5.07e-15!110;UBERON:0001009!5.82e-14!113;UBERON:0006554!2.30e-13!44;UBERON:0003104!6.90e-13!238;UBERON:0009142!6.90e-13!238;UBERON:0009569!8.85e-13!113;UBERON:0003103!1.36e-12!69;UBERON:0001008!1.54e-12!45;UBERON:0001134!1.69e-12!61;UBERON:0002036!1.69e-12!61;UBERON:0003082!1.69e-12!61;UBERON:0002385!1.79e-12!63;UBERON:0001015!1.79e-12!63;UBERON:0000383!1.79e-12!63;UBERON:0002417!5.52e-12!61;UBERON:0000916!5.52e-12!61;UBERON:0004573!9.02e-12!33;UBERON:0004571!9.02e-12!33;UBERON:0000486!1.02e-11!82;UBERON:0005172!1.20e-11!55;UBERON:0005173!1.20e-11!55;UBERON:0000466!1.66e-10!126;UBERON:0001986!1.40e-09!18;UBERON:0004638!1.40e-09!18;UBERON:0004852!1.40e-09!18;UBERON:0000080!1.61e-09!18;UBERON:0002120!1.61e-09!18;UBERON:0004875!1.61e-09!18;UBERON:0005721!1.61e-09!18;UBERON:0005754!1.61e-09!18;UBERON:0007297!1.61e-09!18;UBERON:0005911!1.62e-09!82;UBERON:0004290!1.71e-09!70;UBERON:0002113!2.05e-09!27;UBERON:0003918!2.05e-09!27;UBERON:0005095!2.05e-09!27;UBERON:0007687!2.05e-09!27;UBERON:0000489!2.17e-09!32;UBERON:0005177!3.80e-09!107;UBERON:0004211!4.64e-09!16;UBERON:0001285!4.64e-09!16;UBERON:0007684!4.64e-09!16;UBERON:0003220!4.64e-09!16;UBERON:0004208!4.64e-09!16;UBERON:0006555!5.47e-09!17;UBERON:0005103!5.47e-09!17;UBERON:0000083!5.47e-09!17;UBERON:0009201!5.47e-09!17;UBERON:0004819!5.47e-09!17;UBERON:0006553!5.47e-09!17;UBERON:0003074!5.47e-09!17;UBERON:0003060!5.47e-09!17;UBERON:0004876!6.78e-09!20;UBERON:0003929!8.61e-09!54;UBERON:0000058!8.66e-09!26;UBERON:0003064!8.69e-09!37;UBERON:0000487!2.59e-08!22;UBERON:0000353!3.59e-08!17;UBERON:0001048!3.75e-08!168;UBERON:0000947!5.76e-08!21;UBERON:0010191!5.76e-08!21;UBERON:0000914!7.40e-08!83;UBERON:0002329!7.40e-08!83;UBERON:0003077!7.40e-08!83;UBERON:0003059!7.40e-08!83;UBERON:0007282!7.40e-08!83;UBERON:0009618!7.40e-08!83;UBERON:0007285!7.40e-08!83;UBERON:0003887!1.40e-07!21;UBERON:0000926!3.10e-07!448;UBERON:0004120!3.10e-07!448;UBERON:0006603!3.10e-07!448;UBERON:0001225!3.12e-07!13;UBERON:0008987!3.12e-07!13;UBERON:0009773!4.20e-07!12;UBERON:0001231!4.20e-07!12;UBERON:0004810!4.20e-07!12;UBERON:0003886!9.66e-07!63 | ||
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|phase1_expression=2.72517568905835,1.92690471501885,2.67813367782345,1.0007329835313,2.68176656656373,2.61701557230111,2.53299878168311,36.0080327853294,4.70134130759709,14.498302253589,13.2582221914761,91.9638176668025,60.4026380143159,0.990130823680373,1.65698687863958,78.6620421348577,79.5556776991649,74.4916292195121,91.2434333738248,4.92484232307152,1.63200552995402,21.9418305034661,140.82810566848,50.2329140017485,97.6721736047566,0,0,0,0,0,0,48.7293248973831,28.0121504463773,29.580320813343,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0.689491361473237,0.645484683583826,0,0.188242339542605,0,0,0,0.641858054152187,1.27867425159808,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,32.8643421254782,12.530531060666,0,0,0.144846518960824,4.7717156823066,0.486634870302636,11.4387128768522,11.5299286680533,18.796644138329,8.77559805834675,26.9578513336481,35.9660909500897,0,0.522389211897802,1.19662164466979,0.476981248610684,0.571994910780128,0.371457501329565,35.7772333260069,26.6672724482899,46.5168272154176,49.1817909473888,41.9499436209906,48.6958934233919,64.9974345929481,23.7743418435783,38.7785226328514,47.8650476253478,128.099722840709,25.8492515944294,5.85748938115607,72.4296268281361,90.7358981627571,32.6837005519732,30.3114653045329,23.5357994210143,76.6583187329416,95.875831616381,73.8303028039541,0,0,17.4437620857014,6.46063537203914,30.2646922878346,21.9799240149943,45.8938593198102,13.8320669057359,5.60677600142307,176.135842954013,62.9002248463758,41.7022787435687,353.346092838792,332.644972835888,9.68687536927561,5.18558332031999,1.87457145467037,0.312160076830321,11.9799082524334,0,1.40921398372518,0.971237666208789,0.842704840213491,0,0.491337269247072,0,0,0,10.0117749813183,2.15585442544872,0.673344455816265,1.87677779807946,0,0,0,0,89.6114246964166,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0.508681776931463,94.8910789031787,70.0957529918445,76.290022373475,3.04934265323988,3.44577397635862,8.24976994373581,12.4393266018445,4.54177531576131,2.55484151353081,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,142.464002742557,53.2918740453094,13.1703683626048,16.1709582524096,133.092786562922,46.1928791838484,79.7566374019896,0,19.0632079741826,12.8675857723894,185.807233196803,51.704806498505,102.33849391504,16.8510970188524,0.325808305310325,1.03993478527958,1.44331342025273,12.7523445472585,6.34006948873437,25.2641283581879,30.0940583174797,19.0254152234598,0,0.858486162094873,0,1.17002132569619,1.33768046059855,84.3604505880993,265.747726810596,86.9081346095829,54.7202573714403,30.80719748248,57.8907845539469,3.4486426652716,2.3773077183571,0.414656231081544,0.144119953416961,0,0.317489471460845,0,0,5.13217338068116,1.23392991243988,0,6.85983438313388,2.80327710863402,1.30788020649984,1.1734125731352,4.78305348303778,10.7296933755565,11.834238535784,1.32969058292435,0,2.31486636835928,0,0.266422179016099,9.15059159412144,0,0,12.0522388188682,9.59558261604874,1.58390374586686,10.5503781970855,14.816068796205,4.1988656296464,1.2162378064119,0.502257091432126,0,1.91699884393266,2.29723871668228,0,2.46128221334885,3.28762116080613,0.537182889719687,0,0.394061520403854,0,0.256686072559497,28.2045032886934,20.8223766172195,3.86644406388848,10.0509759200609,4.46557126157214,0,0,0,0.12269149171914,0.500170521059677,2.17012018959788,0,0,0,0,0.300946099727719,2.27407504055985,10.3473071292505,4.64957918974806,2.02806085395873,0.0868836144680828,1.95801157462741,3.0882908142977,0,0,0,8.18444442904901,11.6504807657348,9.97887967987945,16.3751153160393,20.2569804740242,4.49056151092918,13.9671672688714,11.7692667285342,16.407099956648,4.45254199334973,0.616838775210622,4.97172830876756,0.739144404124282,17.6546505922431,0.116210378459959,13.0528205558952,137.146425687447,18.7845217429229,2.87036120411517,5.82691737621495,5.76947425821466,133.555085420594,130.695027066192,120.005514684059,99.3746727642173,99.8518409326604,161.501405380673,171.964736034557,82.048048118813,75.5713538182418,24.9270722540345,24.081109145033,65.5032021725748,72.303612776799,62.2371818127656,0,0.261435451024901,33.3385162651306,16.0727176392856,16.9196765225438,38.4342973446004,4.76161217055386,4.45551299571175,58.5750848756096,87.7581332149304,6.42735719376638,7.83032818166188,14.0184241574326,28.2446761496078,8.27019434907183,11.386545956037,5.65565106265491,7.75562309486518,18.2515673075812,41.6517986709665,25.1768988248289,113.064863270202,23.0639740350654,0,6.2962469366128,10.455559052409,85.9413688691288,128.818059336719,8.69932992075073,31.8757656858742,99.1855465121999,8.93180086463202,9.8077621662805,13.1534833807439,5.62975140884935,1.71175595213568,2.22742273548156,23.5484592059769,21.2249499948311,32.6699065385905,3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| ||
|short_description=p1@LIPG | |short_description=p1@LIPG | ||
}} | }} |
Latest revision as of 17:44, 19 September 2015
Short description: | p1@LIPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LIPG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261292, ENST00000427224, NM_006033, uc002ldu.1, uc002ldv.2, uc010xdh.1_5end |
EntrezGene: | LIPG |
HGNC: | 6623 |
UniProt: | Q9Y5X9B4DTR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.16e-28 | 250 |
mesodermal cell | 3.16e-20 | 121 |
epithelial cell | 9.28e-17 | 253 |
electrically responsive cell | 3.81e-14 | 61 |
electrically active cell | 3.81e-14 | 61 |
muscle cell | 5.35e-14 | 55 |
muscle precursor cell | 3.41e-13 | 58 |
myoblast | 3.41e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.41e-13 | 58 |
endothelial cell of vascular tree | 1.82e-12 | 24 |
smooth muscle cell | 2.06e-12 | 43 |
smooth muscle myoblast | 2.06e-12 | 43 |
endothelial cell | 8.30e-12 | 36 |
meso-epithelial cell | 1.85e-11 | 45 |
vascular associated smooth muscle cell | 1.67e-10 | 32 |
blood vessel endothelial cell | 4.43e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.43e-10 | 18 |
epithelial cell of nephron | 4.89e-10 | 15 |
kidney cell | 1.31e-09 | 17 |
kidney epithelial cell | 1.31e-09 | 17 |
cardiocyte | 2.35e-08 | 16 |
kidney cortical cell | 4.50e-08 | 12 |
renal cortical epithelial cell | 4.50e-08 | 12 |
lining cell | 2.79e-07 | 58 |
barrier cell | 2.79e-07 | 58 |
kidney tubule cell | 2.94e-07 | 10 |
nephron tubule epithelial cell | 2.94e-07 | 10 |