FFCP PHASE1:Hg19::chr2:216003387..216003397,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26154 | |EntrezGene=26154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14637 | |HGNC=14637 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UK0 | |UniProt=Q86UK0 | ||
|association_with_transcript=-236bp_to_ENST00000272895,NM_173076,uc002vew.2,uc010zjn.1_5end | |association_with_transcript=-236bp_to_ENST00000272895,NM_173076,uc002vew.2,uc010zjn.1_5end | ||
|cluster_id=chr2:216003387..216003397,- | |||
|coexpression_cluster_id=C4181 | |||
|description=CAGE_peak_4_at_ABCA12_5end | |description=CAGE_peak_4_at_ABCA12_5end | ||
|id=chr2:216003387..216003397,- | |id=chr2:216003387..216003397,- | ||
|ontology_enrichment_celltype=CL:0002076!6.83e-14!43;CL:0000223!2.88e-12!59;CL:0000066!1.72e-11!254 | |ontology_enrichment_celltype=CL:0002076!6.83e-14!43;CL:0000223!2.88e-12!59;CL:0000066!1.72e-11!254 | ||
|ontology_enrichment_celltype_v019=CL:0000083;2.66e-11;4!CL:0002327;2.66e-11;4!CL:0000039;6.21e-07;7!CL:0000586;6.21e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,2.53e-11,4;CL:0000083,2.80e-11,4;CL:0000039,6.04e-07,7;CL:0000586,6.04e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0008425;8.10e-41;1!UBERON:0004872;5.70e-07;7 | |||
|ontology_enrichment_disease=DOID:1749!1.43e-14!14;DOID:305!5.91e-11!106;DOID:0050687!1.86e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:4074;3.44e-21;2!DOID:4905;3.44e-21;2!DOID:3498;3.44e-21;2!DOID:5093;2.66e-11;4!DOID:1793;2.66e-11;4!DOID:1612;2.66e-11;4!DOID:170;5.73e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,3.81e-21,2;DOID:4905,3.81e-21,2;DOID:3498,3.81e-21,2;DOID:5093,2.53e-11,4;DOID:1612,2.53e-11,4;DOID:1793,2.80e-11,4;DOID:170,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003343!2.51e-08!4;UBERON:0004785!2.51e-08!4;UBERON:0003729!9.84e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.60e-14;3!UBERON:0001911;2.66e-11;4!UBERON:0002394;3.60e-11;4!UBERON:0003928;3.60e-11;4!UBERON:0002075;7.26e-10;18!UBERON:0004177;2.97e-09;5!UBERON:0005057;2.97e-09;5!UBERON:0002294;6.21e-07;7!UBERON:0001173;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.60e-14,3;UBERON:0004854,1.60e-14,3;UBERON:0009034,1.60e-14,3;UBERON:0002095,1.60e-14,3;UBERON:0004782,1.60e-14,3;UBERON:0003281,1.60e-14,3;UBERON:0009664,1.60e-14,3;UBERON:0002296,1.60e-14,3;UBERON:0005602,1.60e-14,3;UBERON:0001179,1.60e-14,3;UBERON:0006293,1.60e-14,3;UBERON:0001911,2.53e-11,4;UBERON:0005333,2.53e-11,4;UBERON:0008425,2.53e-11,4;UBERON:0005311,2.53e-11,4;UBERON:0002075,7.42e-10,18;UBERON:0002394,7.25e-08,6;UBERON:0003928,7.25e-08,6;UBERON:0004177,5.70e-07,7;UBERON:0005057,5.70e-07,7 | |||
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| ||
|short_description=p4@ABCA12 | |short_description=p4@ABCA12 | ||
}} | }} |
Latest revision as of 01:38, 20 September 2015
Short description: | p4@ABCA12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ABCA12_5end |
Coexpression cluster: | C4181_breast_ductal_bile_Mammary_Prostate_oral_malignant |
Association with transcript: | -236bp_to_ENST00000272895, NM_173076, uc002vew.2, uc010zjn.1_5end |
EntrezGene: | ABCA12 |
HGNC: | 14637 |
UniProt: | Q86UK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 2.53e-11 | 4 |
epithelial cell of pancreas | 2.80e-11 | 4 |
germ line cell | 6.04e-07 | 7 |
germ cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.60e-14 | 3 |
gastrointestinal system mesentery | 1.60e-14 | 3 |
stomach region | 1.60e-14 | 3 |
mesentery | 1.60e-14 | 3 |
gastrointestinal system serosa | 1.60e-14 | 3 |
mesentery of stomach | 1.60e-14 | 3 |
gut mesentery | 1.60e-14 | 3 |
dorsal mesentery | 1.60e-14 | 3 |
dorsal mesogastrium | 1.60e-14 | 3 |
peritoneal cavity | 1.60e-14 | 3 |
spleen primordium | 1.60e-14 | 3 |
mammary gland | 2.53e-11 | 4 |
mammary bud | 2.53e-11 | 4 |
mammary ridge | 2.53e-11 | 4 |
mammary placode | 2.53e-11 | 4 |
viscus | 7.42e-10 | 18 |
bile duct | 7.25e-08 | 6 |
digestive system duct | 7.25e-08 | 6 |
hemopoietic organ | 5.70e-07 | 7 |
immune organ | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 3.81e-21 | 2 |
pancreatic carcinoma | 3.81e-21 | 2 |
pancreatic ductal adenocarcinoma | 3.81e-21 | 2 |
thoracic cancer | 2.53e-11 | 4 |
breast cancer | 2.53e-11 | 4 |
pancreatic cancer | 2.80e-11 | 4 |
endocrine gland cancer | 5.92e-08 | 6 |