FFCP PHASE1:Hg19::chr17:80841821..80841827,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6904 | |EntrezGene=6904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11581 | |HGNC=11581 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-200bp_to_AF052173_5end | |association_with_transcript=-200bp_to_AF052173_5end | ||
|cluster_id=chr17:80841821..80841827,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_9_at_TBCD_5end | |description=CAGE_peak_9_at_TBCD_5end | ||
|id=chr17:80841821..80841827,+ | |id=chr17:80841821..80841827,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;6.13e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.13e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002370!3.29e-23!4;UBERON:0005058!3.29e-23!4;UBERON:0009113!3.29e-23!4;UBERON:0003295!3.29e-23!4;UBERON:0005562!3.29e-23!4;UBERON:0000974!1.47e-20!10;UBERON:0003351!7.79e-16!6;UBERON:0004177!1.02e-13!7;UBERON:0000341!2.90e-12!2;UBERON:0003408!6.78e-10!10;UBERON:0001042!6.78e-10!10;UBERON:0009145!6.78e-10!10;UBERON:0006562!4.43e-09!11;UBERON:0009722!4.43e-09!11;UBERON:0007690!4.43e-09!11;UBERON:0008814!6.79e-07!15 | |ontology_enrichment_uberon=UBERON:0002370!3.29e-23!4;UBERON:0005058!3.29e-23!4;UBERON:0009113!3.29e-23!4;UBERON:0003295!3.29e-23!4;UBERON:0005562!3.29e-23!4;UBERON:0000974!1.47e-20!10;UBERON:0003351!7.79e-16!6;UBERON:0004177!1.02e-13!7;UBERON:0000341!2.90e-12!2;UBERON:0003408!6.78e-10!10;UBERON:0001042!6.78e-10!10;UBERON:0009145!6.78e-10!10;UBERON:0006562!4.43e-09!11;UBERON:0009722!4.43e-09!11;UBERON:0007690!4.43e-09!11;UBERON:0008814!6.79e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.04e-34;2!UBERON:0005058;5.04e-34;2!UBERON:0009113;5.04e-34;2!UBERON:0004177;1.60e-14;5!UBERON:0005057;1.60e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.35e-18,4;UBERON:0005058,7.35e-18,4;UBERON:0009113,7.35e-18,4;UBERON:0003295,7.35e-18,4;UBERON:0005562,7.35e-18,4;UBERON:0003351,2.19e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000974,5.73e-08,10;UBERON:0003408,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
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|short_description=p9@TBCD | |short_description=p9@TBCD | ||
}} | }} |
Latest revision as of 14:17, 18 September 2015
Short description: | p9@TBCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TBCD_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -200bp_to_AF052173_5end |
EntrezGene: | TBCD |
HGNC: | 11581 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.35e-18 | 4 |
hemolymphoid system gland | 7.35e-18 | 4 |
thymic region | 7.35e-18 | 4 |
pharyngeal gland | 7.35e-18 | 4 |
thymus primordium | 7.35e-18 | 4 |
pharyngeal epithelium | 2.19e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
neck | 5.73e-08 | 10 |
gland of gut | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.13e-08 | 10 |