FFCP PHASE1:Hg19::chr17:79618770..79618812,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:79618770..79618812,- | |||
|description=CAGE_peak_at_chr17:79618770..79618812,- | |description=CAGE_peak_at_chr17:79618770..79618812,- | ||
|id=chr17:79618770..79618812,- | |id=chr17:79618770..79618812,- | ||
|ontology_enrichment_celltype=CL:0000055!1.89e-12!180;CL:0000057!1.71e-08!75;CL:0000548!7.66e-07!679;CL:0000004!7.66e-07!679;CL:0000255!7.66e-07!679;CL:0000243!8.23e-07!15;CL:0000125!8.23e-07!15;CL:0000030!8.23e-07!15;CL:0000339!8.23e-07!15 | |ontology_enrichment_celltype=CL:0000055!1.89e-12!180;CL:0000057!1.71e-08!75;CL:0000548!7.66e-07!679;CL:0000004!7.66e-07!679;CL:0000255!7.66e-07!679;CL:0000243!8.23e-07!15;CL:0000125!8.23e-07!15;CL:0000030!8.23e-07!15;CL:0000339!8.23e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002602;1.23e-16;2!CL:0000077;7.57e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,1.05e-16,2;CL:0000077,8.19e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;3.11e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.07e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.07e-10!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.37e-17;2!UBERON:0002757;1.37e-17;2!UBERON:0010134;1.37e-17;2!UBERON:0005408;1.37e-17;2!UBERON:0001899;1.37e-17;2!UBERON:0006444;1.23e-16;2!UBERON:0001995;1.23e-16;2!UBERON:0004715;1.23e-16;2!UBERON:0011135;7.15e-15;5!UBERON:0002216;7.15e-15;5!UBERON:0011134;7.15e-15;5!UBERON:0002209;7.15e-15;5!UBERON:0002213;7.15e-15;5!UBERON:0007844;7.15e-15;5!UBERON:0011138;7.15e-15;5!UBERON:0001130;7.15e-15;5!UBERON:0001066;7.15e-15;5!UBERON:0001468;7.15e-15;5!UBERON:0002418;2.08e-11;3!UBERON:0004755;2.08e-11;3!UBERON:0007195;1.69e-09;1!UBERON:0004905;1.69e-09;8!UBERON:0000982;1.69e-09;8!UBERON:0004770;1.69e-09;8!UBERON:0003296;3.00e-09;4!UBERON:0010133;3.00e-09;4!UBERON:0002784;3.00e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.26e-17,2;UBERON:0002757,1.26e-17,2;UBERON:0010134,1.26e-17,2;UBERON:0005408,1.26e-17,2;UBERON:0001899,1.26e-17,2;UBERON:0006444,1.05e-16,2;UBERON:0001995,1.05e-16,2;UBERON:0004715,1.05e-16,2;UBERON:0011135,7.16e-15,5;UBERON:0002216,7.16e-15,5;UBERON:0011134,7.16e-15,5;UBERON:0002209,7.16e-15,5;UBERON:0002213,7.16e-15,5;UBERON:0005856,7.16e-15,5;UBERON:0005866,7.16e-15,5;UBERON:0005863,7.16e-15,5;UBERON:0007844,7.16e-15,5;UBERON:0011138,7.16e-15,5;UBERON:0001130,7.16e-15,5;UBERON:0001066,7.16e-15,5;UBERON:0001468,7.16e-15,5;UBERON:0002418,1.87e-11,3;UBERON:0004755,1.87e-11,3;UBERON:0007195,1.69e-09,1;UBERON:0004905,1.69e-09,8;UBERON:0000982,1.69e-09,8;UBERON:0004770,1.69e-09,8;UBERON:0003296,2.89e-09,4;UBERON:0010133,2.89e-09,4;UBERON:0002784,2.89e-09,4 | |||
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| ||
|short_description=p@chr17:79618770..79618812,- | |short_description=p@chr17:79618770..79618812,- | ||
}} | }} |
Latest revision as of 22:46, 25 July 2015
Short description: | p@chr17:79618770..79618812, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79618770..79618812, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 1.05e-16 | 2 |
mesothelial cell | 8.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.26e-17 | 2 |
regional part of epithalamus | 1.26e-17 | 2 |
secretory circumventricular organ | 1.26e-17 | 2 |
circumventricular organ | 1.26e-17 | 2 |
epithalamus | 1.26e-17 | 2 |
annulus fibrosus | 1.05e-16 | 2 |
fibrocartilage | 1.05e-16 | 2 |
annulus fibrosus disci intervertebralis | 1.05e-16 | 2 |
intervertebral cartilage | 7.16e-15 | 5 |
symphysis | 7.16e-15 | 5 |
nonsynovial joint | 7.16e-15 | 5 |
fibrous joint | 7.16e-15 | 5 |
cartilaginous joint | 7.16e-15 | 5 |
developing mesenchymal condensation | 7.16e-15 | 5 |
pre-cartilage condensation | 7.16e-15 | 5 |
cartilaginous condensation | 7.16e-15 | 5 |
cartilage element | 7.16e-15 | 5 |
post-cranial axial skeletal system | 7.16e-15 | 5 |
vertebral column | 7.16e-15 | 5 |
intervertebral disk | 7.16e-15 | 5 |
intervertebral joint | 7.16e-15 | 5 |
cartilage tissue | 1.87e-11 | 3 |
skeletal tissue | 1.87e-11 | 3 |
stroma of bone marrow | 1.69e-09 | 1 |
articulation | 1.69e-09 | 8 |
skeletal joint | 1.69e-09 | 8 |
articular system | 1.69e-09 | 8 |
gland of diencephalon | 2.89e-09 | 4 |
neuroendocrine gland | 2.89e-09 | 4 |
regional part of diencephalon | 2.89e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.07e-17 | 2 |