FFCP PHASE1:Hg19::chr11:8857295..8857310,-: Difference between revisions
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|id=chr11:8857295..8857310,-
|short_description=p21@ST5
|description=CAGE_peak_21_at_ST5_5end
|association_with_transcript=-37bp_to_ENST00000533225_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6764 | |EntrezGene=6764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11350 | |HGNC=11350 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKV3 | |UniProt=E9PKV3 | ||
|association_with_transcript=-37bp_to_ENST00000533225_5end | |||
|cluster_id=chr11:8857295..8857310,- | |||
|coexpression_cluster_id=C1007 | |||
|description=CAGE_peak_21_at_ST5_5end | |||
|id=chr11:8857295..8857310,- | |||
|ontology_enrichment_celltype=CL:0002541!1.57e-32!3;CL:0000349!2.17e-32!3;CL:0002577!2.17e-32!3;CL:0002536!5.41e-22!2;CL:0002537!6.11e-20!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.26e-89;19!CL:0002541;2.75e-43;3!CL:0002577;5.65e-43;3!CL:0002536;5.25e-29;2!CL:0002537;2.07e-26;5!CL:0000134;8.18e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.66e-89,19;CL:0002541,3.41e-43,3;CL:0002577,5.25e-43,3;CL:0002536,5.25e-29,2;CL:0002537,1.98e-26,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.93e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.65e-107!14;UBERON:0000158!4.65e-107!14;UBERON:0003124!1.40e-73!7;UBERON:0000478!7.60e-62!24;UBERON:0001987!7.84e-43!4;UBERON:0004340!7.84e-43!4;UBERON:0000305!7.79e-38!7;UBERON:0004871!4.06e-33!8;UBERON:0000476!1.57e-32!3;UBERON:0000920!1.57e-32!3;UBERON:0004923!4.13e-25!57;UBERON:0000995!2.26e-08!21;UBERON:0005795!5.35e-08!22;UBERON:0003975!5.35e-08!22;UBERON:0004175!4.69e-07!25;UBERON:0003134!4.69e-07!37;UBERON:0000474!4.69e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.60e-90;10!UBERON:0000158;9.60e-90;10!UBERON:0000478;1.20e-83;24!UBERON:0001987;5.18e-57;4!UBERON:0000305;1.53e-50;7!UBERON:0003124;2.75e-43;3!UBERON:0000920;2.75e-43;3!UBERON:0004923;1.94e-09;55!UBERON:0000077;9.51e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.02e-144,14;UBERON:0000158,6.02e-144,14;UBERON:0003124,1.58e-98,7;UBERON:0000478,1.20e-83,24;UBERON:0001987,4.48e-57,4;UBERON:0004340,4.48e-57,4;UBERON:0000305,1.46e-50,7;UBERON:0004871,2.82e-44,8;UBERON:0000920,3.41e-43,3;UBERON:0004923,8.43e-30,66;UBERON:0000995,3.45e-11,21;UBERON:0005795,1.08e-10,22;UBERON:0003975,1.08e-10,22;UBERON:0004175,1.94e-09,25;UBERON:0000077,3.61e-08,29 | |||
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|short_description=p21@ST5 | |||
}} | }} |
Latest revision as of 23:59, 24 September 2015
Short description: | p21@ST5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_ST5_5end |
Coexpression cluster: | C1007_amniotic_chorionic_Placental_Amniotic_placenta_rectal_umbilical |
Association with transcript: | -37bp_to_ENST00000533225_5end |
EntrezGene: | ST5 |
HGNC: | 11350 |
UniProt: | E9PKV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.66e-89 | 19 |
chorionic membrane mesenchymal stem cell | 3.41e-43 | 3 |
placental epithelial cell | 5.25e-43 | 3 |
amniotic epithelial cell | 5.25e-29 | 2 |
amnion mesenchymal stem cell | 1.98e-26 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.02e-144 | 14 |
membranous layer | 6.02e-144 | 14 |
chorion | 1.58e-98 | 7 |
extraembryonic structure | 1.20e-83 | 24 |
placenta | 4.48e-57 | 4 |
allantois | 4.48e-57 | 4 |
amnion | 1.46e-50 | 7 |
somatic layer of lateral plate mesoderm | 2.82e-44 | 8 |
egg chorion | 3.41e-43 | 3 |
organ component layer | 8.43e-30 | 66 |
uterus | 3.45e-11 | 21 |
embryonic uterus | 1.08e-10 | 22 |
internal female genitalia | 1.08e-10 | 22 |
internal genitalia | 1.94e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 3.61e-08 | 29 |