FFCP PHASE1:Hg19::chr11:8795787..8795804,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:8795787..8795804,-
|short_description=p26@ST5
|description=CAGE_peak_26_at_ST5_5end
|association_with_transcript=0bp_to_ENST00000528196_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6764 | |EntrezGene=6764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11350 | |HGNC=11350 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKN3 | |UniProt=E9PKN3 | ||
|association_with_transcript=0bp_to_ENST00000528196_5end | |||
|cluster_id=chr11:8795787..8795804,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_26_at_ST5_5end | |||
|id=chr11:8795787..8795804,- | |||
|ontology_enrichment_celltype=CL:0002076!7.64e-22!43;CL:0002368!2.33e-15!13;CL:0000223!6.41e-15!59;CL:0002251!3.52e-09!21;CL:0000622!3.45e-08!5;CL:0002159!6.57e-08!13;CL:0000154!6.83e-07!6;CL:0000068!8.76e-07!3;CL:0000069!8.76e-07!3;CL:0000307!8.76e-07!3;CL:0000377!8.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002252;3.58e-26;1!CL:0002336;8.64e-26;1!CL:0002261;8.64e-26;1!CL:0002170;8.64e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,4.61e-26,1;CL:0002336,9.79e-26,1;CL:0002261,9.79e-26,1;CL:0002170,9.79e-26,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.16e-26;1!UBERON:0008814;1.29e-13;2!UBERON:0010056;1.29e-13;2 | |||
|ontology_enrichment_disease=DOID:1749!1.72e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!2.50e-15!35;UBERON:0001004!3.62e-15!72;UBERON:0004119!2.12e-12!169;UBERON:0000925!2.12e-12!169;UBERON:0006595!2.12e-12!169;UBERON:0000166!6.09e-12!21;UBERON:0000065!4.00e-11!53;UBERON:0000165!5.01e-11!28;UBERON:0000930!5.01e-11!28;UBERON:0003126!1.53e-10!7;UBERON:0001005!1.53e-10!7;UBERON:0003127!2.42e-10!2;UBERON:0003102!2.82e-09!95;UBERON:0003729!1.65e-08!5;UBERON:0007196!7.66e-08!14;UBERON:0001558!7.66e-08!14;UBERON:0001007!1.68e-07!155;UBERON:0001555!1.68e-07!155;UBERON:0007026!1.68e-07!155;UBERON:0001042!3.22e-07!10;UBERON:0009145!3.22e-07!10;UBERON:0001444!3.54e-07!48;UBERON:0000974!4.61e-07!10;UBERON:0001723!6.18e-07!3;UBERON:0001033!6.18e-07!3;UBERON:0010056!6.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001043;3.33e-34;3!UBERON:0002372;3.58e-26;1!UBERON:0001961;3.58e-26;1!UBERON:0001744;3.58e-26;1!UBERON:0001042;3.58e-26;1!UBERON:0001735;3.58e-26;1!UBERON:0000341;8.28e-14;2!UBERON:0006562;8.28e-14;2!UBERON:0003127;1.29e-13;2!UBERON:0001723;1.60e-09;3!UBERON:0001033;1.60e-09;3!UBERON:0001555;3.35e-09;54!UBERON:0000165;1.27e-08;28!UBERON:0001041;3.90e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,3.94e-34,3;UBERON:0009143,3.94e-34,3;UBERON:0002372,3.58e-26,1;UBERON:0001961,3.58e-26,1;UBERON:0001744,3.58e-26,1;UBERON:0001735,3.58e-26,1;UBERON:0000341,7.30e-14,2;UBERON:0003127,1.07e-13,2;UBERON:0001042,6.61e-11,10;UBERON:0009145,6.61e-11,10;UBERON:0006562,5.29e-10,11;UBERON:0001723,1.54e-09,3;UBERON:0001033,1.54e-09,3;UBERON:0010056,1.54e-09,3;UBERON:0000165,2.39e-08,29;UBERON:0000930,2.39e-08,29;UBERON:0007023,6.31e-08,114;UBERON:0001041,2.26e-07,87;UBERON:0005178,2.89e-07,34;UBERON:0002224,2.89e-07,34;UBERON:0005181,4.48e-07,35;UBERON:0000153,8.13e-07,62;UBERON:0007811,8.13e-07,62 | |||
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| ||
|short_description=p26@ST5 | |||
}} | }} |
Latest revision as of 23:37, 24 September 2015
Short description: | p26@ST5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_ST5_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000528196_5end |
EntrezGene: | ST5 |
HGNC: | 11350 |
UniProt: | E9PKN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 4.61e-26 | 1 |
buccal mucosa cell | 9.79e-26 | 1 |
endothelial cell of viscerocranial mucosa | 9.79e-26 | 1 |
keratinized cell of the oral mucosa | 9.79e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
esophagus | 3.94e-34 | 3 |
esophageal region | 3.94e-34 | 3 |
tonsil | 3.58e-26 | 1 |
mucosa-associated lymphoid tissue | 3.58e-26 | 1 |
lymphoid tissue | 3.58e-26 | 1 |
tonsillar ring | 3.58e-26 | 1 |
throat | 7.30e-14 | 2 |
open tracheal system trachea | 1.07e-13 | 2 |
chordate pharynx | 6.61e-11 | 10 |
pharyngeal region of foregut | 6.61e-11 | 10 |
pharynx | 5.29e-10 | 11 |
tongue | 1.54e-09 | 3 |
gustatory system | 1.54e-09 | 3 |
future tongue | 1.54e-09 | 3 |
mouth | 2.39e-08 | 29 |
stomodeum | 2.39e-08 | 29 |
adult organism | 6.31e-08 | 114 |
foregut | 2.26e-07 | 87 |
thoracic cavity element | 2.89e-07 | 34 |
thoracic cavity | 2.89e-07 | 34 |
thoracic segment organ | 4.48e-07 | 35 |
anterior region of body | 8.13e-07 | 62 |
craniocervical region | 8.13e-07 | 62 |