FFCP PHASE1:Hg19::chr17:47723874..47723882,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8405 | |EntrezGene=8405 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11254 | |HGNC=11254 | ||
|TSSclassifier=strong | |||
|UniProt=D6RD94 | |UniProt=D6RD94 | ||
|association_with_transcript=101bp_to_ENST00000510476_5end | |association_with_transcript=101bp_to_ENST00000510476_5end | ||
|cluster_id=chr17:47723874..47723882,- | |||
|coexpression_cluster_id=C3651 | |||
|description=CAGE_peak_4_at_SPOP_5end | |description=CAGE_peak_4_at_SPOP_5end | ||
|id=chr17:47723874..47723882,- | |id=chr17:47723874..47723882,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.76e-24;2!UBERON:0009143;3.54e-13;1!UBERON:0005754;3.54e-13;1!UBERON:0004874;5.71e-13;1!UBERON:0006603;3.70e-07;65!UBERON:0006965;4.04e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.75e-15!115;UBERON:0006947!5.10e-08!3;UBERON:0004054!5.10e-08!3;UBERON:0003101!6.82e-08!22;UBERON:0000079!6.82e-08!22;UBERON:0004921!2.51e-07!129;UBERON:0004185!2.51e-07!129;UBERON:0003135!4.43e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.74e-36;3!UBERON:0004054;7.74e-36;3!UBERON:0005904;4.51e-27;4!UBERON:0000059;2.28e-17;11!UBERON:0003135;2.43e-17;11!UBERON:0001000;1.61e-13;1!UBERON:0005352;1.61e-13;1!UBERON:0003101;3.22e-13;22!UBERON:0000079;3.22e-13;22!UBERON:0005795;3.54e-13;1!UBERON:0000998;3.54e-13;1!UBERON:0006868;3.54e-13;1!UBERON:0000989;5.71e-13;1!UBERON:0008811;5.71e-13;1!UBERON:0005409;8.78e-13;22!UBERON:0002146;9.17e-13;1!UBERON:0001301;9.17e-13;1!UBERON:0005623;9.17e-13;1!UBERON:0001155;1.73e-12;9!UBERON:0004921;3.31e-12;33!UBERON:0000058;3.26e-11;10!UBERON:0000160;1.02e-10;17!UBERON:0004175;3.34e-09;21!UBERON:0001255;3.18e-07;2!UBERON:0001556;3.18e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.42e-36,3;UBERON:0004054,5.42e-36,3;UBERON:0005904,3.45e-27,4;UBERON:0003135,2.01e-17,11;UBERON:0000059,2.28e-17,11;UBERON:0007023,1.31e-15,114;UBERON:0001000,1.61e-13,1;UBERON:0005352,1.61e-13,1;UBERON:0000998,2.95e-13,1;UBERON:0006868,2.95e-13,1;UBERON:0003101,2.98e-13,22;UBERON:0000079,2.98e-13,22;UBERON:0000989,4.77e-13,1;UBERON:0008811,4.77e-13,1;UBERON:0006258,4.77e-13,1;UBERON:0005876,4.77e-13,1;UBERON:0004874,4.77e-13,1;UBERON:0001301,7.68e-13,1;UBERON:0002146,8.64e-13,1;UBERON:0005623,8.64e-13,1;UBERON:0001155,1.70e-12,9;UBERON:0005409,2.66e-11,25;UBERON:0000160,1.02e-10,17;UBERON:0003064,2.49e-10,28;UBERON:0004876,3.67e-10,11;UBERON:0004175,9.01e-08,25;UBERON:0001255,3.48e-07,2;UBERON:0001556,3.48e-07,2;UBERON:0005156,9.06e-07,59;UBERON:0000990,9.06e-07,59 | |||
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| ||
|short_description=p4@SPOP | |short_description=p4@SPOP | ||
}} | }} |
Latest revision as of 21:22, 15 September 2015
Short description: | p4@SPOP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPOP_5end |
Coexpression cluster: | C3651_ductus_colon_smooth_stomach_bladder_esophagus_penis |
Association with transcript: | 101bp_to_ENST00000510476_5end |
EntrezGene: | SPOP |
HGNC: | 11254 |
UniProt: | D6RD94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.42e-36 | 3 |
internal male genitalia | 5.42e-36 | 3 |
duct of male reproductive system | 3.45e-27 | 4 |
male reproductive organ | 2.01e-17 | 11 |
large intestine | 2.28e-17 | 11 |
adult organism | 1.31e-15 | 114 |
vas deferens | 1.61e-13 | 1 |
spermatic cord | 1.61e-13 | 1 |
seminal vesicle | 2.95e-13 | 1 |
seminal fluid secreting gland | 2.95e-13 | 1 |
male organism | 2.98e-13 | 22 |
male reproductive system | 2.98e-13 | 22 |
penis | 4.77e-13 | 1 |
intromittent organ | 4.77e-13 | 1 |
lateral plate mesenchyme | 4.77e-13 | 1 |
undifferentiated genital tubercle | 4.77e-13 | 1 |
somatopleure | 4.77e-13 | 1 |
epididymis | 7.68e-13 | 1 |
pulmonary valve | 8.64e-13 | 1 |
semi-lunar valve | 8.64e-13 | 1 |
colon | 1.70e-12 | 9 |
gastrointestinal system | 2.66e-11 | 25 |
intestine | 1.02e-10 | 17 |
intermediate mesoderm | 2.49e-10 | 28 |
urogenital ridge | 3.67e-10 | 11 |
internal genitalia | 9.01e-08 | 25 |
urinary bladder | 3.48e-07 | 2 |
lower urinary tract | 3.48e-07 | 2 |
reproductive structure | 9.06e-07 | 59 |
reproductive system | 9.06e-07 | 59 |