FFCP PHASE1:Hg19::chr17:42988004..42988033,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt=A7REI1 | |UniProt=A7REI1 | ||
|association_with_transcript=0bp_to_DQ979832_5end | |association_with_transcript=0bp_to_DQ979832_5end | ||
|cluster_id=chr17:42988004..42988033,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_21_at_GFAP_5end | |description=CAGE_peak_21_at_GFAP_5end | ||
|id=chr17:42988004..42988033,- | |id=chr17:42988004..42988033,- | ||
|ontology_enrichment_celltype=CL:0002605!2.97e-12!3;CL:0000128!7.62e-09!7;CL:0000126!7.62e-09!7;CL:0000127!7.62e-09!7;CL:0002453!7.62e-09!7 | |ontology_enrichment_celltype=CL:0002605!2.97e-12!3;CL:0000128!7.62e-09!7;CL:0000126!7.62e-09!7;CL:0000127!7.62e-09!7;CL:0002453!7.62e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0002605;4.75e-16;3!CL:0000128;9.53e-12;7!CL:0000126;9.53e-12;7!CL:0000127;9.53e-12;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.59e-16,3;CL:0000128,8.29e-12,7;CL:0000126,8.29e-12,7;CL:0000127,8.29e-12,7;CL:0002453,8.29e-12,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.58e-17;3!UBERON:0003057;4.58e-17;3!UBERON:0006601;6.96e-15;82!UBERON:0006215;1.69e-07;3!UBERON:0005425;8.57e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p21@GFAP | |short_description=p21@GFAP | ||
}} | }} |
Latest revision as of 23:34, 24 September 2015
Short description: | p21@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_DQ979832_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | A7REI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.59e-16 | 3 |
oligodendrocyte | 8.29e-12 | 7 |
macroglial cell | 8.29e-12 | 7 |
astrocyte | 8.29e-12 | 7 |
oligodendrocyte precursor cell | 8.29e-12 | 7 |