FFCP PHASE1:Hg19::chr11:1892132..1892145,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4046 | |EntrezGene=4046 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6707 | |HGNC=6707 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBV6,P33241 | |UniProt=E9PBV6,P33241 | ||
|association_with_transcript=-8bp_to_NM_001013255,uc001lum.2_5end | |||
|cluster_id=chr11:1892132..1892145,+ | |||
|coexpression_cluster_id=C3126 | |||
|description=CAGE_peak_22_at_LSP1_5end | |||
|id=chr11:1892132..1892145,+ | |||
|ontology_enrichment_celltype=CL:0000153!2.27e-13!9;CL:0000447!2.27e-13!9;CL:0000667!5.80e-11!6;CL:0000058!5.80e-11!6;CL:0000138!5.80e-11!6;CL:0000135!1.65e-08!3;CL:0000386!1.65e-08!3;CL:0000388!1.65e-08!3;CL:0002564!1.70e-08!3;CL:0000327!3.89e-08!14;CL:0000499!1.57e-07!27;CL:0000630!9.05e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000138;5.41e-33;6!CL:0000153;5.44e-22;9!CL:0000447;5.44e-22;9!CL:0002602;8.32e-18;2!CL:0000499;2.42e-13;28!CL:0000327;3.72e-13;15!CL:0000135;4.34e-12;3!CL:0000388;4.34e-12;3!CL:0002564;9.55e-12;3!CL:0002581;3.00e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,6.02e-33,6;CL:0000138,6.02e-33,6;CL:0000153,5.84e-22,9;CL:0000447,5.84e-22,9;CL:0002602,7.68e-18,2;CL:0000499,2.64e-13,28;CL:0000327,3.87e-13,15;CL:0000135,5.13e-12,3;CL:0000388,5.13e-12,3;CL:0002564,6.73e-12,3;CL:0002581,2.55e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.00e-09;1!UBERON:0001045;3.00e-09;1!UBERON:0004874;3.00e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.56e-24!115;UBERON:0002780!2.43e-09!41;UBERON:0001890!2.43e-09!41;UBERON:0006240!2.43e-09!41;UBERON:0002619!4.01e-09!22;UBERON:0003080!4.89e-09!42;UBERON:0003075!5.48e-09!86;UBERON:0007284!5.48e-09!86;UBERON:0001893!9.49e-09!34;UBERON:0004905!1.05e-08!5;UBERON:0000982!1.05e-08!5;UBERON:0004770!1.05e-08!5;UBERON:0001049!1.51e-08!57;UBERON:0005068!1.51e-08!57;UBERON:0006241!1.51e-08!57;UBERON:0007135!1.51e-08!57;UBERON:0000043!1.65e-08!3;UBERON:0002242!1.70e-08!3;UBERON:0003068!1.70e-08!3;UBERON:0002328!1.70e-08!3;UBERON:0004880!1.70e-08!3;UBERON:0002346!2.45e-08!90;UBERON:0001950!2.80e-08!20;UBERON:0002616!4.05e-08!59;UBERON:0001869!4.08e-08!32;UBERON:0000956!8.21e-08!25;UBERON:0000203!8.21e-08!25;UBERON:0002791!1.05e-07!33;UBERON:0000955!4.44e-07!69;UBERON:0006238!4.44e-07!69;UBERON:0005743!5.50e-07!86;UBERON:0003056!5.63e-07!61;UBERON:0001017!9.18e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.44e-26;5!UBERON:0002216;1.44e-26;5!UBERON:0011134;1.44e-26;5!UBERON:0002209;1.44e-26;5!UBERON:0002213;1.44e-26;5!UBERON:0007844;1.44e-26;5!UBERON:0011138;1.44e-26;5!UBERON:0001130;1.44e-26;5!UBERON:0001066;1.44e-26;5!UBERON:0001468;1.44e-26;5!UBERON:0006444;8.32e-18;2!UBERON:0001995;8.32e-18;2!UBERON:0004715;8.32e-18;2!UBERON:0004905;1.06e-16;8!UBERON:0000982;1.06e-16;8!UBERON:0004770;1.06e-16;8!UBERON:0002418;3.49e-12;3!UBERON:0004755;3.49e-12;3!UBERON:0007846;4.34e-12;3!UBERON:0000043;4.34e-12;3!UBERON:0007845;4.34e-12;3!UBERON:0002242;9.55e-12;3!UBERON:0001723;1.68e-11;3!UBERON:0001033;1.68e-11;3!UBERON:0001013;2.24e-09;14!UBERON:0001154;3.00e-09;1!UBERON:0000989;3.00e-09;1!UBERON:0001153;3.00e-09;1!UBERON:0008811;3.00e-09;1!UBERON:0009854;3.00e-09;1!UBERON:0000075;1.98e-08;16!UBERON:0004765;1.06e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,8.87e-27,5;UBERON:0002216,8.87e-27,5;UBERON:0011134,8.87e-27,5;UBERON:0002209,8.87e-27,5;UBERON:0002213,8.87e-27,5;UBERON:0005856,8.87e-27,5;UBERON:0005866,8.87e-27,5;UBERON:0005863,8.87e-27,5;UBERON:0007844,8.87e-27,5;UBERON:0011138,8.87e-27,5;UBERON:0001130,8.87e-27,5;UBERON:0001066,8.87e-27,5;UBERON:0001468,8.87e-27,5;UBERON:0006444,7.68e-18,2;UBERON:0001995,7.68e-18,2;UBERON:0004715,7.68e-18,2;UBERON:0004905,7.82e-17,8;UBERON:0000982,7.82e-17,8;UBERON:0004770,7.82e-17,8;UBERON:0002418,3.31e-12,3;UBERON:0004755,3.31e-12,3;UBERON:0007846,5.13e-12,3;UBERON:0000043,5.13e-12,3;UBERON:0007845,5.13e-12,3;UBERON:0002242,6.73e-12,3;UBERON:0003068,6.73e-12,3;UBERON:0002328,6.73e-12,3;UBERON:0004880,6.73e-12,3;UBERON:0001723,1.77e-11,3;UBERON:0001033,1.77e-11,3;UBERON:0010056,1.77e-11,3;UBERON:0001013,1.99e-09,14;UBERON:0000989,2.35e-09,1;UBERON:0008811,2.35e-09,1;UBERON:0006258,2.35e-09,1;UBERON:0005876,2.35e-09,1;UBERON:0004874,2.35e-09,1;UBERON:0001154,4.15e-09,1;UBERON:0001153,4.15e-09,1;UBERON:0001045,4.15e-09,1;UBERON:0000075,1.71e-08,16 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,1.56711376919903,0,0,0,0,3.83675694176145,3.31397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.00267582127178,1.15877215168659,2.3858578411533,1.45990461090791,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,2.26023954805422,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,2.50085260529839,0.542530047399471,0,0,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,1.10513566212459,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0,0,0,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,1.35784623083787,0,0.451961481561065,0,0,0.253243183823515,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0.77380195455795,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.947015026375446,1.76097531226803,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,1.48863353516788,0,0,0,0,0.606965604236632,0.682986574053893,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,2.23197010900051,3.23522940041993,0.432626562123789,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,1.74173398317569,1.02669990325584,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p22@LSP1 | |||
}} | }} |
Latest revision as of 04:10, 17 September 2015
Short description: | p22@LSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_LSP1_5end |
Coexpression cluster: | C3126_Anulus_Myoblast_tenocyte_Mesenchymal_Nucleus_immature_Chondrocyte |
Association with transcript: | -8bp_to_NM_001013255, uc001lum.2_5end |
EntrezGene: | LSP1 |
HGNC: | 6707 |
UniProt: | E9PBV6P33241 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 6.02e-33 | 6 |
chondrocyte | 6.02e-33 | 6 |
GAG secreting cell | 5.84e-22 | 9 |
carbohydrate secreting cell | 5.84e-22 | 9 |
annulus pulposus cell | 7.68e-18 | 2 |
stromal cell | 2.64e-13 | 28 |
extracellular matrix secreting cell | 3.87e-13 | 15 |
fibrocyte | 5.13e-12 | 3 |
tendon cell | 5.13e-12 | 3 |
nucleus pulposus cell of intervertebral disc | 6.73e-12 | 3 |
perirenal preadipocyte | 2.55e-09 | 1 |