FFCP PHASE1:Hg19::chr17:38875395..38875406,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=32968 | |HGNC=32968 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000422957_5end | |association_with_transcript=-3bp_to_ENST00000422957_5end | ||
|cluster_id=chr17:38875395..38875406,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_2_at_KRT223P_5end | |description=CAGE_peak_2_at_KRT223P_5end | ||
|id=chr17:38875395..38875406,- | |id=chr17:38875395..38875406,- | ||
|ontology_enrichment_celltype=CL:0000349!7.42e-20!3;CL:0002577!7.42e-20!3;CL:0002537!2.65e-12!5;CL:0002541!1.82e-09!3;CL:0002581!1.18e-07!1;CL:0002616!1.42e-07!1 | |ontology_enrichment_celltype=CL:0000349!7.42e-20!3;CL:0002577!7.42e-20!3;CL:0002537!2.65e-12!5;CL:0002541!1.82e-09!3;CL:0002581!1.18e-07!1;CL:0002616!1.42e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.51e-69;19!CL:0002577;6.12e-50;3!CL:0002537;8.54e-31;5!CL:0002541;5.15e-23;3!CL:0002581;1.22e-17;1!CL:0002536;1.71e-09;2!CL:0002615;7.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.29e-69,19;CL:0002577,5.18e-50,3;CL:0002537,7.72e-31,5;CL:0002541,6.44e-23,3;CL:0002581,1.22e-17,1;CL:0002536,1.44e-09,2;CL:0002615,8.15e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.16e-43!14;UBERON:0000158!1.16e-43!14;UBERON:0003124!5.48e-32!7;UBERON:0001987!2.03e-25!4;UBERON:0004340!2.03e-25!4;UBERON:0000478!9.91e-25!24;UBERON:0005795!1.31e-16!22;UBERON:0004923!4.16e-16!57;UBERON:0000305!5.24e-15!7;UBERON:0004175!1.81e-14!25;UBERON:0005406!1.51e-13!2;UBERON:0000995!2.02e-13!21;UBERON:0004871!3.80e-13!8;UBERON:0003975!9.02e-13!22;UBERON:0000476!1.82e-09!3;UBERON:0000920!1.82e-09!3;UBERON:0003133!8.54e-09!48;UBERON:0001736!1.72e-07!1;UBERON:0006298!1.72e-07!1;UBERON:0001000!1.95e-07!1;UBERON:0005352!1.95e-07!1;UBERON:0002135!2.21e-07!1;UBERON:0003134!3.04e-07!37;UBERON:0000474!3.04e-07!37;UBERON:0006834!3.62e-07!1;UBERON:0005156!6.85e-07!59;UBERON:0000990!6.85e-07!59 | |ontology_enrichment_uberon=UBERON:0005631!1.16e-43!14;UBERON:0000158!1.16e-43!14;UBERON:0003124!5.48e-32!7;UBERON:0001987!2.03e-25!4;UBERON:0004340!2.03e-25!4;UBERON:0000478!9.91e-25!24;UBERON:0005795!1.31e-16!22;UBERON:0004923!4.16e-16!57;UBERON:0000305!5.24e-15!7;UBERON:0004175!1.81e-14!25;UBERON:0005406!1.51e-13!2;UBERON:0000995!2.02e-13!21;UBERON:0004871!3.80e-13!8;UBERON:0003975!9.02e-13!22;UBERON:0000476!1.82e-09!3;UBERON:0000920!1.82e-09!3;UBERON:0003133!8.54e-09!48;UBERON:0001736!1.72e-07!1;UBERON:0006298!1.72e-07!1;UBERON:0001000!1.95e-07!1;UBERON:0005352!1.95e-07!1;UBERON:0002135!2.21e-07!1;UBERON:0003134!3.04e-07!37;UBERON:0000474!3.04e-07!37;UBERON:0006834!3.62e-07!1;UBERON:0005156!6.85e-07!59;UBERON:0000990!6.85e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.77e-59;10!UBERON:0000158;2.77e-59;10!UBERON:0000478;5.50e-55;24!UBERON:0000305;2.80e-38;7!UBERON:0001987;1.11e-37;4!UBERON:0003124;5.15e-23;3!UBERON:0000920;5.15e-23;3!UBERON:0005406;1.71e-09;2!UBERON:0004923;6.59e-08;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.40e-94,14;UBERON:0000158,1.40e-94,14;UBERON:0003124,1.14e-58,7;UBERON:0000478,4.85e-55,24;UBERON:0000305,2.10e-38,7;UBERON:0001987,9.81e-38,4;UBERON:0004340,9.81e-38,4;UBERON:0004871,1.13e-33,8;UBERON:0004923,2.46e-24,66;UBERON:0000920,6.44e-23,3;UBERON:0005406,1.71e-09,2;UBERON:0000995,1.02e-07,21;UBERON:0005795,2.16e-07,22;UBERON:0003975,2.16e-07,22 | |||
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|short_description=p2@KRT223P | |short_description=p2@KRT223P | ||
}} | }} |
Latest revision as of 03:22, 20 September 2015
Short description: | p2@KRT223P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT223P_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -3bp_to_ENST00000422957_5end |
EntrezGene: | NA |
HGNC: | 32968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.29e-69 | 19 |
placental epithelial cell | 5.18e-50 | 3 |
amnion mesenchymal stem cell | 7.72e-31 | 5 |
chorionic membrane mesenchymal stem cell | 6.44e-23 | 3 |
perirenal preadipocyte | 1.22e-17 | 1 |
amniotic epithelial cell | 1.44e-09 | 2 |
adipocyte of omentum tissue | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.40e-94 | 14 |
membranous layer | 1.40e-94 | 14 |
chorion | 1.14e-58 | 7 |
extraembryonic structure | 4.85e-55 | 24 |
amnion | 2.10e-38 | 7 |
placenta | 9.81e-38 | 4 |
allantois | 9.81e-38 | 4 |
somatic layer of lateral plate mesoderm | 1.13e-33 | 8 |
organ component layer | 2.46e-24 | 66 |
egg chorion | 6.44e-23 | 3 |
perirenal fat | 1.71e-09 | 2 |
uterus | 1.02e-07 | 21 |
embryonic uterus | 2.16e-07 | 22 |
internal female genitalia | 2.16e-07 | 22 |