FFCP PHASE1:Hg19::chr17:37824863..37824891,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5409 | |EntrezGene=5409 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9160 | |HGNC=9160 | ||
|TSSclassifier=strong | |||
|UniProt=Q6FHD9 | |UniProt=Q6FHD9 | ||
|association_with_transcript=134bp_to_CR541815_5end | |association_with_transcript=134bp_to_CR541815_5end | ||
|cluster_id=chr17:37824863..37824891,+ | |||
|description=CAGE_peak_3_at_PNMT_5end | |description=CAGE_peak_3_at_PNMT_5end | ||
|id=chr17:37824863..37824891,+ | |id=chr17:37824863..37824891,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.66e-18;19!CL:0002577;9.38e-18;3!CL:0002536;1.05e-12;2!CL:0002541;2.12e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.59e-18,19;CL:0002577,5.47e-18,3;CL:0002536,1.05e-12,2;CL:0002541,2.91e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.35e-12;2!UBERON:0005754;2.22e-07;1!UBERON:0006222;2.90e-07;1!UBERON:0008425;9.23e-07;1!UBERON:0006601;9.40e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;7.24e-12;2!DOID:178;9.23e-07;1!DOID:326;9.23e-07;1!DOID:3978;9.23e-07;1!DOID:3394;9.23e-07;1!DOID:5844;9.23e-07;1!DOID:8552;9.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.49e-12,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000369;2.12e-23;4!UBERON:0002435;2.12e-23;4!UBERON:0000204;2.12e-23;4!UBERON:0009663;2.84e-20;7!UBERON:0005383;5.78e-18;3!UBERON:0005382;5.78e-18;3!UBERON:0002420;1.00e-15;9!UBERON:0000125;1.00e-15;9!UBERON:0007245;1.00e-15;9!UBERON:0002308;1.00e-15;9!UBERON:0010009;1.00e-15;9!UBERON:0010011;1.00e-15;9!UBERON:0000454;1.00e-15;9!UBERON:0002780;4.08e-15;41!UBERON:0001890;4.08e-15;41!UBERON:0002791;3.17e-14;32!UBERON:0000478;4.00e-14;24!UBERON:0001869;1.23e-13;32!UBERON:0001987;1.88e-13;4!UBERON:0001893;1.79e-12;34!UBERON:0003528;2.09e-12;34!UBERON:0002020;2.09e-12;34!UBERON:0001873;2.35e-12;2!UBERON:0000007;2.63e-12;2!UBERON:0005631;2.51e-09;10!UBERON:0000158;2.51e-09;10!UBERON:0000073;4.36e-09;53!UBERON:0002616;4.36e-09;53!UBERON:0006947;5.49e-09;3!UBERON:0004054;5.49e-09;3!UBERON:0007023;1.88e-08;114!UBERON:0003124;2.12e-08;3!UBERON:0000920;2.12e-08;3!UBERON:0000955;5.88e-08;68!UBERON:0001894;6.33e-08;7!UBERON:0001017;1.90e-07;75!UBERON:0000998;2.22e-07;1!UBERON:0006868;2.22e-07;1!UBERON:0001000;2.36e-07;1!UBERON:0005352;2.36e-07;1!UBERON:0001874;2.50e-07;1!UBERON:0001882;3.67e-07;1!UBERON:0005403;3.67e-07;1!UBERON:0005904;6.20e-07;4!UBERON:0002902;9.23e-07;1!UBERON:0002022;9.23e-07;1!UBERON:0002135;9.23e-07;1!UBERON:0009899;9.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.47e-23,4;UBERON:0002435,1.47e-23,4;UBERON:0000204,1.47e-23,4;UBERON:0010082,1.47e-23,4;UBERON:0009663,2.53e-20,7;UBERON:0003124,4.43e-20,7;UBERON:0002780,7.61e-20,41;UBERON:0001890,7.61e-20,41;UBERON:0003080,7.61e-20,41;UBERON:0006240,7.61e-20,41;UBERON:0005631,3.96e-19,14;UBERON:0000158,3.96e-19,14;UBERON:0005383,3.88e-18,3;UBERON:0005382,3.88e-18,3;UBERON:0007023,3.99e-17,114;UBERON:0002420,9.14e-16,9;UBERON:0000125,9.14e-16,9;UBERON:0007245,9.14e-16,9;UBERON:0002308,9.14e-16,9;UBERON:0010009,9.14e-16,9;UBERON:0010011,9.14e-16,9;UBERON:0000454,9.14e-16,9;UBERON:0002791,5.43e-15,32;UBERON:0001869,5.43e-15,32;UBERON:0000073,7.56e-15,53;UBERON:0002616,7.56e-15,53;UBERON:0000478,3.94e-14,24;UBERON:0003528,4.93e-14,34;UBERON:0002020,4.93e-14,34;UBERON:0001893,4.93e-14,34;UBERON:0001049,6.28e-14,56;UBERON:0005068,6.28e-14,56;UBERON:0006241,6.28e-14,56;UBERON:0007135,6.28e-14,56;UBERON:0001987,1.26e-13,4;UBERON:0004340,1.26e-13,4;UBERON:0003056,1.36e-12,61;UBERON:0000007,1.49e-12,2;UBERON:0001873,1.58e-12,2;UBERON:0010122,1.58e-12,2;UBERON:0000955,7.38e-11,68;UBERON:0006238,7.38e-11,68;UBERON:0001017,2.59e-10,81;UBERON:0003075,2.80e-10,82;UBERON:0007284,2.80e-10,82;UBERON:0002346,1.12e-09,86;UBERON:0001016,4.98e-09,89;UBERON:0006947,5.50e-09,3;UBERON:0004054,5.50e-09,3;UBERON:0010371,8.38e-09,104;UBERON:0000920,2.91e-08,3;UBERON:0001894,4.94e-08,7;UBERON:0006222,4.94e-08,7;UBERON:0000998,2.22e-07,1;UBERON:0006868,2.22e-07,1;UBERON:0001000,2.36e-07,1;UBERON:0005352,2.36e-07,1;UBERON:0001874,2.50e-07,1;UBERON:0001882,3.78e-07,1;UBERON:0005403,3.78e-07,1;UBERON:0005904,6.21e-07,4;UBERON:0002135,8.02e-07,1;UBERON:0002022,8.98e-07,1 | |||
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|short_description=p3@PNMT | |short_description=p3@PNMT | ||
}} | }} |
Latest revision as of 22:30, 19 September 2015
Short description: | p3@PNMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PNMT_5end |
Coexpression cluster: | NA |
Association with transcript: | 134bp_to_CR541815_5end |
EntrezGene: | PNMT |
HGNC: | 9160 |
UniProt: | Q6FHD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.59e-18 | 19 |
placental epithelial cell | 5.47e-18 | 3 |
amniotic epithelial cell | 1.05e-12 | 2 |
chorionic membrane mesenchymal stem cell | 2.91e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.49e-12 | 2 |