FFCP PHASE1:Hg19::chr10:95242083..95242098,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26509 | |EntrezGene=26509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3656 | |HGNC=3656 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8J4,C9JCN0,Q9NZM1 | |UniProt=F8W8J4,C9JCN0,Q9NZM1 | ||
|association_with_transcript=-9bp_to_ENST00000371489,ENST00000371501,ENST00000371502,NM_013451,NM_133337,uc001kin.2,uc001kio.2,uc001kip.3,uc009xuf.2_5end | |||
|cluster_id=chr10:95242083..95242098,- | |||
|coexpression_cluster_id=C2080 | |||
|description=CAGE_peak_2_at_MYOF_5end | |||
|id=chr10:95242083..95242098,- | |||
|ontology_enrichment_celltype=CL:0000055!1.67e-24!180;CL:0000057!9.05e-17!75;CL:0000220!1.56e-15!246;CL:0002321!6.89e-15!248;CL:0000548!2.88e-14!679;CL:0000004!2.88e-14!679;CL:0000255!2.88e-14!679;CL:0000012!2.67e-13!682;CL:0000066!1.16e-12!254;CL:0000222!1.84e-12!119;CL:0002620!1.43e-11!23;CL:0000076!3.28e-09!62;CL:0000680!5.69e-09!57;CL:0000056!5.69e-09!57;CL:0000355!5.69e-09!57;CL:0000187!3.90e-08!54;CL:0000183!1.03e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.81e-12;23!CL:0000057;9.86e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.11e-18,76;CL:0002321,9.87e-16,250;CL:0000066,3.72e-13,253;CL:0000222,4.89e-13,121;CL:0002620,9.28e-12,23;CL:0000076,7.65e-10,63;CL:0000680,2.86e-09,58;CL:0000056,2.86e-09,58;CL:0000355,2.86e-09,58;CL:0000187,2.04e-08,55;CL:0000192,8.47e-07,43;CL:0000514,8.47e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!9.65e-19!216;UBERON:0003102!5.50e-15!95;UBERON:0000475!1.65e-14!365;UBERON:0000914!5.92e-14!83;UBERON:0002329!5.92e-14!83;UBERON:0003077!5.92e-14!83;UBERON:0003059!5.92e-14!83;UBERON:0007282!5.92e-14!83;UBERON:0009618!5.92e-14!83;UBERON:0007285!5.92e-14!83;UBERON:0003104!7.94e-14!238;UBERON:0009142!7.94e-14!238;UBERON:0000468!1.47e-12!659;UBERON:0005256!1.67e-12!143;UBERON:0000486!1.40e-11!82;UBERON:0004290!6.42e-11!70;UBERON:0000467!2.15e-10!625;UBERON:0002097!2.38e-10!40;UBERON:0000480!3.96e-10!626;UBERON:0000926!4.74e-10!448;UBERON:0004120!4.74e-10!448;UBERON:0006603!4.74e-10!448;UBERON:0002199!1.09e-09!45;UBERON:0002416!1.09e-09!45;UBERON:0000481!2.96e-09!347;UBERON:0000490!1.82e-08!138;UBERON:0001134!3.43e-08!61;UBERON:0002036!3.43e-08!61;UBERON:0003082!3.43e-08!61;UBERON:0002385!6.38e-08!63;UBERON:0001015!6.38e-08!63;UBERON:0000383!6.38e-08!63;UBERON:0002049!1.13e-07!79;UBERON:0007798!1.13e-07!79;UBERON:0004923!3.68e-07!57;UBERON:0004119!5.50e-07!169;UBERON:0000925!5.50e-07!169;UBERON:0006595!5.50e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.62e-08;41!UBERON:0004923;6.59e-08;55!UBERON:0002199;2.29e-07;46!UBERON:0002416;2.29e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.75e-16,199;UBERON:0003102,4.78e-15,99;UBERON:0000486,7.63e-12,83;UBERON:0000490,3.05e-11,148;UBERON:0002329,4.22e-11,71;UBERON:0003059,4.22e-11,71;UBERON:0007282,4.22e-11,71;UBERON:0004290,4.22e-11,71;UBERON:0009618,4.22e-11,71;UBERON:0003104,5.09e-11,160;UBERON:0009142,5.09e-11,160;UBERON:0007524,5.23e-11,73;UBERON:0002097,8.33e-11,41;UBERON:0007503,1.31e-10,78;UBERON:0003077,1.49e-10,72;UBERON:0007285,1.49e-10,72;UBERON:0002199,3.98e-10,46;UBERON:0002416,3.98e-10,46;UBERON:0005256,1.13e-09,122;UBERON:0004923,2.37e-09,66;UBERON:0001134,2.48e-08,62;UBERON:0002036,2.48e-08,62;UBERON:0003082,2.48e-08,62;UBERON:0002385,4.64e-08,64;UBERON:0001015,4.64e-08,64;UBERON:0000383,4.64e-08,64;UBERON:0002049,2.08e-07,78;UBERON:0007798,2.08e-07,78 | |||
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| ||
|short_description=p2@MYOF | |||
}} | }} |
Latest revision as of 01:28, 20 September 2015
Short description: | p2@MYOF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYOF_5end |
Coexpression cluster: | C2080_mucinous_Fibroblast_epithelioid_Preadipocyte_Olfactory_prostate_acantholytic |
Association with transcript: | -9bp_to_ENST00000371489, ENST00000371501, ENST00000371502, NM_013451, NM_133337, uc001kin.2, uc001kio.2, uc001kip.3, uc009xuf.2_5end |
EntrezGene: | MYOF |
HGNC: | 3656 |
UniProt: | F8W8J4C9JCN0Q9NZM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.11e-18 | 76 |
embryonic cell | 9.87e-16 | 250 |
epithelial cell | 3.72e-13 | 253 |
mesodermal cell | 4.89e-13 | 121 |
skin fibroblast | 9.28e-12 | 23 |
squamous epithelial cell | 7.65e-10 | 63 |
muscle precursor cell | 2.86e-09 | 58 |
myoblast | 2.86e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.86e-09 | 58 |
muscle cell | 2.04e-08 | 55 |
smooth muscle cell | 8.47e-07 | 43 |
smooth muscle myoblast | 8.47e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
trunk | 6.75e-16 | 199 |
surface structure | 4.78e-15 | 99 |
multilaminar epithelium | 7.63e-12 | 83 |
unilaminar epithelium | 3.05e-11 | 148 |
somite | 4.22e-11 | 71 |
presomitic mesoderm | 4.22e-11 | 71 |
presumptive segmental plate | 4.22e-11 | 71 |
dermomyotome | 4.22e-11 | 71 |
trunk paraxial mesoderm | 4.22e-11 | 71 |
mesenchyme | 5.09e-11 | 160 |
entire embryonic mesenchyme | 5.09e-11 | 160 |
dense mesenchyme tissue | 5.23e-11 | 73 |
skin of body | 8.33e-11 | 41 |
epithelial vesicle | 1.31e-10 | 78 |
paraxial mesoderm | 1.49e-10 | 72 |
presumptive paraxial mesoderm | 1.49e-10 | 72 |
integument | 3.98e-10 | 46 |
integumental system | 3.98e-10 | 46 |
trunk mesenchyme | 1.13e-09 | 122 |
organ component layer | 2.37e-09 | 66 |
skeletal muscle tissue | 2.48e-08 | 62 |
striated muscle tissue | 2.48e-08 | 62 |
myotome | 2.48e-08 | 62 |
muscle tissue | 4.64e-08 | 64 |
musculature | 4.64e-08 | 64 |
musculature of body | 4.64e-08 | 64 |
vasculature | 2.08e-07 | 78 |
vascular system | 2.08e-07 | 78 |