FFCP PHASE1:Hg19::chr17:17295178..17295181,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:17295178..17295181,+ | |||
|description=CAGE_peak_at_chr17:17295178..17295181,+ | |description=CAGE_peak_at_chr17:17295178..17295181,+ | ||
|id=chr17:17295178..17295181,+ | |id=chr17:17295178..17295181,+ | ||
|ontology_enrichment_celltype=CL:0000791!6.93e-38!18;CL:0000789!6.93e-38!18;CL:0002420!6.93e-38!18;CL:0002419!6.93e-38!18;CL:0000790!6.93e-38!18;CL:0000084!7.61e-37!25;CL:0000827!7.61e-37!25;CL:0000838!6.02e-29!52;CL:0000542!3.01e-28!53;CL:0000051!3.01e-28!53;CL:0000625!2.24e-22!11;CL:0000738!2.79e-20!140;CL:0002087!1.45e-17!119;CL:0000037!2.14e-17!172;CL:0000566!2.14e-17!172;CL:0000988!9.14e-17!182;CL:0000624!1.28e-14!6;CL:0002031!3.09e-14!124;CL:0002032!1.86e-13!165;CL:0000837!1.86e-13!165;CL:0000784!4.95e-09!3;CL:0000623!9.44e-09!3;CL:0000825!9.44e-09!3;CL:0000898!2.85e-08!3;CL:0000842!1.31e-07!3 | |ontology_enrichment_celltype=CL:0000791!6.93e-38!18;CL:0000789!6.93e-38!18;CL:0002420!6.93e-38!18;CL:0002419!6.93e-38!18;CL:0000790!6.93e-38!18;CL:0000084!7.61e-37!25;CL:0000827!7.61e-37!25;CL:0000838!6.02e-29!52;CL:0000542!3.01e-28!53;CL:0000051!3.01e-28!53;CL:0000625!2.24e-22!11;CL:0000738!2.79e-20!140;CL:0002087!1.45e-17!119;CL:0000037!2.14e-17!172;CL:0000566!2.14e-17!172;CL:0000988!9.14e-17!182;CL:0000624!1.28e-14!6;CL:0002031!3.09e-14!124;CL:0002032!1.86e-13!165;CL:0000837!1.86e-13!165;CL:0000784!4.95e-09!3;CL:0000623!9.44e-09!3;CL:0000825!9.44e-09!3;CL:0000898!2.85e-08!3;CL:0000842!1.31e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.18e-33;3!CL:0000084;1.54e-27;25!CL:0000625;6.84e-25;11!CL:0000791;1.04e-21;18!CL:0000789;1.04e-21;18!CL:0002419;1.04e-21;18!CL:0000542;4.47e-16;53!CL:0000623;8.43e-16;3!CL:0002127;1.11e-12;1!CL:0000911;1.11e-12;1!CL:0000814;1.11e-12;1!CL:0000451;1.23e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.07e-33,3;CL:0000084,1.37e-27,25;CL:0000827,1.37e-27,25;CL:0000625,5.34e-25,11;CL:0000838,2.80e-24,52;CL:0000542,8.57e-24,53;CL:0000051,8.57e-24,53;CL:0000791,8.35e-22,18;CL:0000789,8.35e-22,18;CL:0002420,8.35e-22,18;CL:0002419,8.35e-22,18;CL:0000790,8.35e-22,18;CL:0000623,1.32e-15,3;CL:0000825,1.32e-15,3;CL:0000738,7.04e-14,136;CL:0002127,9.92e-13,1;CL:0000914,9.92e-13,1;CL:0000911,9.92e-13,1;CL:0000814,9.92e-13,1;CL:0002042,9.92e-13,1;CL:0002039,9.92e-13,1;CL:0002040,9.92e-13,1;CL:0002041,9.92e-13,1;CL:0002087,4.04e-12,115;CL:0002031,1.51e-11,120;CL:0000037,7.17e-11,168;CL:0000988,3.23e-10,177;CL:0000451,1.43e-09,10;CL:0002032,3.49e-08,161;CL:0000837,3.49e-08,161;CL:0000893,5.41e-07,2;CL:0002489,5.41e-07,2;CL:0000809,5.41e-07,2;CL:0000808,5.41e-07,2;CL:0000894,5.41e-07,2;CL:0000806,5.41e-07,2;CL:0000807,5.41e-07,2;CL:0000805,5.41e-07,2;CL:0002425,5.41e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.04e-21;18!CL:0000051;4.47e-16;53!CL:0002425;5.73e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.53e-11!4;UBERON:0005058!4.53e-11!4;UBERON:0009113!4.53e-11!4;UBERON:0003295!4.53e-11!4;UBERON:0005562!4.53e-11!4;UBERON:0004177!4.59e-09!7;UBERON:0001042!2.15e-08!10;UBERON:0009145!2.15e-08!10;UBERON:0006562!1.47e-07!11;UBERON:0003351!2.42e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.01e-07;2!UBERON:0005058;9.01e-07;2!UBERON:0009113;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.86e-12,4;UBERON:0005058,3.86e-12,4;UBERON:0009113,3.86e-12,4;UBERON:0003295,3.86e-12,4;UBERON:0005562,3.86e-12,4;UBERON:0003351,2.17e-08,6;UBERON:0004177,2.60e-07,7;UBERON:0005057,2.60e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.526768169550154,0.590129310341499,0.393010762749165,0.411202997999018,0,0.977766799900771,0.473447805734733,1.94826728407911,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0.328875809207352,0,0,0.741432815810302,1.33770414044857,0,0,0.766440987203842,0.68725489096526,0.506039384039006,1.59282707162048,1.95325036156926,0,0.903450714466637,0.76791966692651,1.24930726552346,0.473554504088034,0.821127996921047,1.41124720257313,2.40696176205157,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,2.8618874916641,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80212859983818,2.36436912242313,1.07813787429759,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11742430127209,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,3.75808548536231,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.803892390468535,0,0,0,0,0.452122368852043,1.55186785739645,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.526768169550154,0.590129310341499,0.393010762749165,0.411202997999018,0,0.977766799900771,0.473447805734733,1.94826728407911,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0.328875809207352,0,0,0.741432815810302,1.33770414044857,0,0,0.766440987203842,0.68725489096526,0.506039384039006,1.59282707162048,1.95325036156926,0,0.903450714466637,0.76791966692651,1.24930726552346,0.473554504088034,0.821127996921047,1.41124720257313,2.40696176205157,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,2.8618874916641,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80212859983818,2.36436912242313,1.07813787429759,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11742430127209,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,3.75808548536231,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.803892390468535,0,0,0,0,0.452122368852043,1.55186785739645,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:17295178..17295181,+ | |short_description=p@chr17:17295178..17295181,+ | ||
}} | }} |
Latest revision as of 14:18, 25 July 2015
Short description: | p@chr17:17295178..17295181, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:17295178..17295181, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.86e-12 | 4 |
hemolymphoid system gland | 3.86e-12 | 4 |
thymic region | 3.86e-12 | 4 |
pharyngeal gland | 3.86e-12 | 4 |
thymus primordium | 3.86e-12 | 4 |
pharyngeal epithelium | 2.17e-08 | 6 |
hemopoietic organ | 2.60e-07 | 7 |
immune organ | 2.60e-07 | 7 |