FFCP PHASE1:Hg19::chr20:36776392..36776431,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:36776392..36776431,- | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_at_chr20:36776392..36776431,- | |description=CAGE_peak_at_chr20:36776392..36776431,- | ||
|id=chr20:36776392..36776431,- | |id=chr20:36776392..36776431,- | ||
|ontology_enrichment_celltype=CL:0000222!1.56e-15!119;CL:0000192!4.99e-15!42;CL:0000514!4.99e-15!42;CL:0000359!2.71e-11!32;CL:0000183!6.08e-11!59;CL:0000187!9.97e-11!54;CL:0000680!1.30e-10!57;CL:0000056!1.30e-10!57;CL:0000355!1.30e-10!57;CL:0000115!5.01e-10!35;CL:0002139!6.40e-10!24;CL:0000220!3.16e-09!246;CL:0002078!5.94e-09!44;CL:0002321!6.54e-09!248;CL:0000393!2.22e-08!60;CL:0000211!2.22e-08!60;CL:0000071!2.35e-08!18;CL:0002546!2.35e-08!18 | |ontology_enrichment_celltype=CL:0000222!1.56e-15!119;CL:0000192!4.99e-15!42;CL:0000514!4.99e-15!42;CL:0000359!2.71e-11!32;CL:0000183!6.08e-11!59;CL:0000187!9.97e-11!54;CL:0000680!1.30e-10!57;CL:0000056!1.30e-10!57;CL:0000355!1.30e-10!57;CL:0000115!5.01e-10!35;CL:0002139!6.40e-10!24;CL:0000220!3.16e-09!246;CL:0002078!5.94e-09!44;CL:0002321!6.54e-09!248;CL:0000393!2.22e-08!60;CL:0000211!2.22e-08!60;CL:0000071!2.35e-08!18;CL:0002546!2.35e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.87e-11;32!CL:0000349;5.18e-11;19!CL:0000192;5.48e-10;43!CL:0002541;3.48e-08;3!CL:0002539;5.11e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.38e-11,43;CL:0000514,1.38e-11,43;CL:0000359,1.41e-11,32;CL:0000349,4.21e-11,19;CL:0000222,1.74e-10,121;CL:0002541,3.59e-08,3;CL:0000187,4.31e-08,55;CL:0000680,1.87e-07,58;CL:0000056,1.87e-07,58;CL:0000355,1.87e-07,58;CL:0000115,2.15e-07,36;CL:0002539,4.21e-07,10;CL:0000393,6.92e-07,61;CL:0000211,6.92e-07,61;CL:0002622,8.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;5.48e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.13e-26!118;UBERON:0002049!1.06e-22!79;UBERON:0007798!1.06e-22!79;UBERON:0001981!1.86e-21!60;UBERON:0007500!1.86e-21!60;UBERON:0004537!1.86e-21!60;UBERON:0006965!1.86e-21!60;UBERON:0000055!3.33e-21!69;UBERON:0004872!4.62e-21!84;UBERON:0000490!2.34e-19!138;UBERON:0001637!7.99e-17!42;UBERON:0003509!7.99e-17!42;UBERON:0004572!7.99e-17!42;UBERON:0001009!2.11e-16!113;UBERON:0005256!2.65e-16!143;UBERON:0004535!6.07e-15!110;UBERON:0000119!6.84e-14!312;UBERON:0004573!2.79e-13!33;UBERON:0004571!2.79e-13!33;UBERON:0000483!3.46e-13!309;UBERON:0000477!6.14e-13!286;UBERON:0004111!2.16e-12!241;UBERON:0002100!4.06e-12!216;UBERON:0005631!3.59e-11!14;UBERON:0000158!3.59e-11!14;UBERON:0000025!7.55e-11!194;UBERON:0002385!1.91e-10!63;UBERON:0001015!1.91e-10!63;UBERON:0000383!1.91e-10!63;UBERON:0001134!8.19e-10!61;UBERON:0002036!8.19e-10!61;UBERON:0003082!8.19e-10!61;UBERON:0000486!2.16e-09!82;UBERON:0000947!6.46e-09!21;UBERON:0010191!6.46e-09!21;UBERON:0000914!9.27e-09!83;UBERON:0002329!9.27e-09!83;UBERON:0003077!9.27e-09!83;UBERON:0003059!9.27e-09!83;UBERON:0007282!9.27e-09!83;UBERON:0009618!9.27e-09!83;UBERON:0007285!9.27e-09!83;UBERON:0004290!9.58e-09!70;UBERON:0000926!1.03e-08!448;UBERON:0004120!1.03e-08!448;UBERON:0006603!1.03e-08!448;UBERON:0000478!1.06e-08!24;UBERON:0000468!1.10e-08!659;UBERON:0003104!1.78e-08!238;UBERON:0009142!1.78e-08!238;UBERON:0001986!2.35e-08!18;UBERON:0004638!2.35e-08!18;UBERON:0004852!2.35e-08!18;UBERON:0001135!2.61e-08!15;UBERON:0003081!4.59e-08!216;UBERON:0000487!5.50e-08!22;UBERON:0000481!1.56e-07!347;UBERON:0000467!1.61e-07!625;UBERON:0000480!2.07e-07!626;UBERON:0003064!2.93e-07!37;UBERON:0006914!4.54e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.86e-12;42!UBERON:0003509;7.86e-12;42!UBERON:0004572;7.86e-12;42!UBERON:0005631;1.72e-11;10!UBERON:0000158;1.72e-11;10!UBERON:0004573;1.88e-11;33!UBERON:0004571;1.88e-11;33!UBERON:0003914;3.04e-11;74!UBERON:0000478;7.65e-10;24!UBERON:0007500;9.34e-09;56!UBERON:0001981;9.34e-09;56!UBERON:0004537;9.34e-09;56!UBERON:0002049;1.53e-08;75!UBERON:0007798;1.53e-08;75!UBERON:0003124;3.48e-08;3!UBERON:0000920;3.48e-08;3!UBERON:0000947;4.09e-08;21!UBERON:0010191;4.09e-08;21!UBERON:0000055;1.31e-07;65!UBERON:0004237;5.11e-07;10!UBERON:0004695;5.11e-07;10!UBERON:0002111;5.11e-07;10!UBERON:0004178;5.11e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,4.42e-18,78;UBERON:0007798,4.42e-18,78;UBERON:0007500,1.37e-17,59;UBERON:0001981,1.37e-17,59;UBERON:0004537,1.37e-17,59;UBERON:0006965,1.37e-17,59;UBERON:0000055,3.68e-17,68;UBERON:0003914,6.30e-16,117;UBERON:0005631,7.71e-16,14;UBERON:0000158,7.71e-16,14;UBERON:0004872,3.32e-15,83;UBERON:0001637,3.56e-15,42;UBERON:0003509,3.56e-15,42;UBERON:0004572,3.56e-15,42;UBERON:0001009,6.40e-13,112;UBERON:0004573,1.05e-12,33;UBERON:0004571,1.05e-12,33;UBERON:0000490,1.23e-12,148;UBERON:0003124,3.46e-12,7;UBERON:0004535,1.84e-11,109;UBERON:0005256,4.58e-11,122;UBERON:0000478,6.33e-10,24;UBERON:0007503,1.59e-08,78;UBERON:0003081,2.24e-08,203;UBERON:0000920,3.59e-08,3;UBERON:0000947,4.88e-08,21;UBERON:0010191,4.88e-08,21;UBERON:0002100,7.11e-08,199;UBERON:0000926,8.44e-08,315;UBERON:0004120,8.44e-08,315;UBERON:0006603,8.44e-08,315;UBERON:0003104,9.76e-08,160;UBERON:0009142,9.76e-08,160;UBERON:0004111,3.09e-07,240;UBERON:0004237,4.21e-07,10;UBERON:0004695,4.21e-07,10;UBERON:0002111,4.21e-07,10;UBERON:0004178,4.21e-07,10;UBERON:0000119,7.17e-07,309;UBERON:0003064,9.10e-07,28 | |||
|phase1_expression=1.99846217197612,1.49870366723688,1.12763523276777,0,2.23480547213644,0.872338524100369,0,0,0,0.491467873003018,0.697801167972428,3.71350332621293,5.53910654279752,0.123766352960047,0,0,1.80808358407193,2.19093027116212,0.487932798790507,0.123121058076788,1.22400414746552,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,2.50668955317945,0,3.1811437882044,0.486634870302636,0.378139268656271,3.76939975686359,2.72287835648691,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,2.6591592103773,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,0,0.419499436209906,2.20094433552054,0.835979866147242,0.258416759169329,0,0.33472061276467,1.61131726843659,0.760272105718513,0.488124115096339,0,2.43042584364528,1.07159673940896,0.44905874525234,0.225222960966644,4.5994991239765,3.79706263827252,1.46561395144326,0,0,0,1.49091585508596,2.15271869829786,0.264818361626438,1.14734648299525,1.06400514659507,1.12135520028461,0,0.74000264525148,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0.30648779579902,2.25357088359895,0.340296549480063,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.337552664482532,0.974370051611986,0,0,0,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0.643240938192885,5.52539685409922,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,2.21446636387394,0,0,0,1.26755034821831,3.9313088667105,0.590789906681404,0,0.122988438543114,1.20097467208968,0.219500570817251,0,0,0,0,0,1.44331342025273,0,0.587043471179108,1.29929802984966,0.925971025153221,3.04406643575357,0,0,0,1.40402559083543,0.297262324577456,0,0.16798212819886,0.850650583454319,0.0895585227028483,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,1.30788020649984,0.07333828582095,0.258543431515556,0,0,7.1803291477915,3.12022310734098,0,0,0,1.00084595560703,1.62786481617433,0.823240336780769,0,0.355391948742546,0.791951872933429,0.904318131178758,0,0.199945982364114,0,0,4.21667878966063,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.24782516918484,2.14114786556594,0.473107245101804,0.702848489956279,0.300946099727719,4.5481500811197,0,0.664225598535437,0.553107505625109,0.173767228936166,0,0,0,0,0,0.303127571446259,6.65741758041988,5.44302527993425,0.992431231275107,0.460385919864187,0.841980283299221,0.256278298511402,0,0.321707842287215,0,0,0,0,0,0,0.120859449591622,2.80709058424599,0,1.60740227430449,1.0925470080403,1.83574180943194,0.451199612907412,0.462092022626489,0,0,0.211103257785751,2.27466768141793,0.680374821106063,1.0795795805107,4.62681758070868,0.270946437543853,1.00337954770971,1.27438136522519,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0,0.495854746082934,0,0,0,1.39453664789186,1.25924938732256,2.0911118104818,0.616067160352178,1.59691809095107,0.869932992075073,6.4863476686372,0.858749320451947,0,0,0.953150969619124,0,0,1.27281299170375,0,0.719489830333259,2.47083326762449,0.589062011728432,0.606547444719948,4.75530963519025,0.421258456238981,0.48763373908959,0.731140468893853,1.05650146756755,1.50149902548784,1.1312434556297,0,0,1.32687795048244,12.2766247871054,0.578775534266688,0.655894752046633,0.811641507850816,1.54911749049875,3.09865162785466,0.286822704408103,0.0982490410131212,1.07001315444375,0.709522128141196,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.659006605437454,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55722532125772,0.95497793895076,0.296964680832639,0.614321404198464,0,0,2.56010021552684,0,0,0.398495976502139,0,0,0,0,0.311039587661807,2.87578723671446,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.461701551022782,0.455768223388005,0,0,0,3.50901275705111,5.31266041730801,3.19820865611181,0,0,0,0,0,0,0,0,2.10998064528027,0.652931232636591,0,0,0,0.265372693510018,0,0,0,0,0,0.802577647298789,0,0,0,0.485560759068186,0,0,0,0.252746318513952,0,0,0,1.65495977937749,0.627865836814451,0,0,0.138674673013139,0,0,0,0.698906672968121,0.171986032471617,0.0967563312890851,0,0,0.193978032976839,0.264768380074501,0,0.685209623233754,0,0,0,0.881747022766871,0.85381197895741,0.599428828746391,0,0,0,0.432164393964449,0.124252535565433,0.471388069233591,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.837847203816763,0.229160424011684,0,1.59743200399193,3.004582336956,0.669514372325618,0,0,0,0,0,0,0.0984274815147488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| ||
|short_description=p@chr20:36776392..36776431,- | |short_description=p@chr20:36776392..36776431,- | ||
}} | }} |
Latest revision as of 13:51, 28 July 2015
Short description: | p@chr20:36776392..36776431, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36776392..36776431, - |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.38e-11 | 43 |
smooth muscle myoblast | 1.38e-11 | 43 |
vascular associated smooth muscle cell | 1.41e-11 | 32 |
extraembryonic cell | 4.21e-11 | 19 |
mesodermal cell | 1.74e-10 | 121 |
chorionic membrane mesenchymal stem cell | 3.59e-08 | 3 |
muscle cell | 4.31e-08 | 55 |
muscle precursor cell | 1.87e-07 | 58 |
myoblast | 1.87e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.87e-07 | 58 |
endothelial cell | 2.15e-07 | 36 |
aortic smooth muscle cell | 4.21e-07 | 10 |
electrically responsive cell | 6.92e-07 | 61 |
electrically active cell | 6.92e-07 | 61 |
prostate stromal cell | 8.16e-07 | 3 |