FFCP PHASE1:Hg19::chr20:22564895..22564910,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3170 | |EntrezGene=3170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5022 | |HGNC=5022 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPG7 | |UniProt=E7EPG7 | ||
|association_with_transcript=0bp_to_ENST00000444877_5end | |association_with_transcript=0bp_to_ENST00000444877_5end | ||
|cluster_id=chr20:22564895..22564910,- | |||
|description=CAGE_peak_1_at_FOXA2_5end | |description=CAGE_peak_1_at_FOXA2_5end | ||
|id=chr20:22564895..22564910,- | |id=chr20:22564895..22564910,- | ||
|ontology_enrichment_celltype=CL:0000223!1.93e-17!59;CL:0000066!4.18e-15!254;CL:0002076!1.18e-11!43;CL:0002368!3.64e-11!13;CL:0000181!5.88e-09!12;CL:0000417!5.88e-09!12;CL:0000668!5.88e-09!12;CL:0000414!5.88e-09!12;CL:0000412!5.88e-09!12;CL:0000182!5.88e-09!12;CL:0002202!7.29e-07!9;CL:0002632!7.29e-07!9 | |ontology_enrichment_celltype=CL:0000223!1.93e-17!59;CL:0000066!4.18e-15!254;CL:0002076!1.18e-11!43;CL:0002368!3.64e-11!13;CL:0000181!5.88e-09!12;CL:0000417!5.88e-09!12;CL:0000668!5.88e-09!12;CL:0000414!5.88e-09!12;CL:0000412!5.88e-09!12;CL:0000182!5.88e-09!12;CL:0002202!7.29e-07!9;CL:0002632!7.29e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.02e-16;13!CL:0002076;2.50e-13;42!CL:0000182;3.69e-11;12!CL:0002202;3.96e-10;9!CL:0002632;3.96e-10;9!CL:0000307;8.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.52e-22,58;CL:0000066,9.39e-17,253;CL:0002368,1.24e-16,13;CL:0002076,1.25e-15,42;CL:0000182,3.65e-11,12;CL:0002202,4.63e-10,9;CL:0002632,4.63e-10,9;CL:0000068,8.08e-07,3;CL:0000069,8.08e-07,3;CL:0000307,8.08e-07,3;CL:0000377,8.08e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.39e-16;30!UBERON:0009497;2.78e-15;13!CL:0000223;8.65e-15;58!UBERON:0004161;3.50e-12;11!UBERON:0003104;1.84e-08;31!CL:0000377;8.58e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.51e-12!106;DOID:0050687!1.04e-10!143;DOID:162!2.63e-07!235;DOID:14566!3.33e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3119;5.83e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.84e-09,106;DOID:0050687,1.03e-07,143;DOID:3119,5.90e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.47e-25!169;UBERON:0000925!6.47e-25!169;UBERON:0006595!6.47e-25!169;UBERON:0001007!7.50e-25!155;UBERON:0001555!7.50e-25!155;UBERON:0007026!7.50e-25!155;UBERON:0004921!7.38e-22!129;UBERON:0004185!7.38e-22!129;UBERON:0005911!9.14e-22!82;UBERON:0000077!1.80e-18!130;UBERON:0003929!8.92e-17!54;UBERON:0000466!1.32e-16!126;UBERON:0005177!8.02e-16!107;UBERON:0001041!9.57e-14!98;UBERON:0009497!2.50e-12!25;UBERON:0000015!2.50e-12!25;UBERON:0002423!2.50e-12!25;UBERON:0006235!2.50e-12!25;UBERON:0004161!2.50e-12!25;UBERON:0009856!9.31e-12!26;UBERON:0005153!3.93e-11!37;UBERON:0007499!5.25e-11!25;UBERON:0009854!1.08e-10!23;UBERON:0001048!1.46e-10!168;UBERON:0009569!5.67e-10!113;UBERON:0008835!6.10e-10!22;UBERON:0003894!6.10e-10!22;UBERON:0000464!1.36e-09!104;UBERON:0005178!2.51e-09!34;UBERON:0002224!2.51e-09!34;UBERON:0005157!5.47e-09!51;UBERON:0005181!6.65e-09!35;UBERON:0002107!8.81e-09!19;UBERON:0006925!8.81e-09!19;UBERON:0008836!8.81e-09!19;UBERON:0003104!1.54e-08!238;UBERON:0009142!1.54e-08!238;UBERON:0005409!4.91e-08!35;UBERON:0000065!5.92e-08!53;UBERON:0002100!6.86e-08!216;UBERON:0002048!1.10e-07!22;UBERON:0000117!1.10e-07!22;UBERON:0000171!1.10e-07!22;UBERON:0000170!1.10e-07!22;UBERON:0005597!1.10e-07!22;UBERON:0000118!1.10e-07!22;UBERON:0002530!1.38e-07!59;UBERON:0005172!2.27e-07!55;UBERON:0005173!2.27e-07!55;UBERON:0000949!3.15e-07!45;UBERON:0008947!8.35e-07!38;UBERON:0003258!8.35e-07!38;UBERON:0002365!8.93e-07!31;UBERON:0002330!8.93e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;9.48e-14;25!UBERON:0002107;6.98e-12;19!UBERON:0006925;6.98e-12;19!UBERON:0005409;4.91e-10;22!UBERON:0002048;3.31e-09;22!UBERON:0000117;3.31e-09;22!UBERON:0000171;3.31e-09;22!UBERON:0000170;3.31e-09;22!UBERON:0005178;7.41e-09;34!UBERON:0002224;7.41e-09;34!UBERON:0002365;1.26e-08;31!UBERON:0002330;1.26e-08;31!UBERON:0005181;1.36e-08;35!UBERON:0000065;4.17e-08;44!UBERON:0000160;2.91e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.64e-22,118;UBERON:0004119,3.37e-20,160;UBERON:0000925,3.37e-20,160;UBERON:0006595,3.37e-20,160;UBERON:0001007,4.39e-19,145;UBERON:0001555,4.39e-19,145;UBERON:0007026,4.39e-19,145;UBERON:0005911,2.90e-17,82;UBERON:0001041,7.85e-17,87;UBERON:0007499,1.34e-15,25;UBERON:0009856,7.71e-15,26;UBERON:0005177,2.47e-14,101;UBERON:0008835,8.21e-14,22;UBERON:0003894,8.21e-14,22;UBERON:0009497,9.12e-14,25;UBERON:0000015,9.12e-14,25;UBERON:0002423,9.12e-14,25;UBERON:0006235,9.12e-14,25;UBERON:0004161,9.12e-14,25;UBERON:0009854,4.64e-13,23;UBERON:0002107,6.92e-12,19;UBERON:0006925,6.92e-12,19;UBERON:0008836,6.92e-12,19;UBERON:0003929,1.13e-11,54;UBERON:0009569,5.59e-11,112;UBERON:0005157,1.44e-10,47;UBERON:0005153,2.92e-10,37;UBERON:0005178,5.94e-10,34;UBERON:0002224,5.94e-10,34;UBERON:0000065,1.06e-09,54;UBERON:0005181,1.46e-09,35;UBERON:0002048,3.89e-09,22;UBERON:0000117,3.89e-09,22;UBERON:0000171,3.89e-09,22;UBERON:0000170,3.89e-09,22;UBERON:0005597,3.89e-09,22;UBERON:0000118,3.89e-09,22;UBERON:0002365,8.13e-09,31;UBERON:0002330,8.13e-09,31;UBERON:0005409,1.68e-08,25;UBERON:0011216,1.92e-07,223;UBERON:0001004,2.20e-07,74;UBERON:0008947,2.43e-07,38;UBERON:0003258,2.43e-07,38;UBERON:0000160,3.42e-07,17;UBERON:0005172,4.65e-07,54;UBERON:0005173,4.65e-07,54 | |||
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| ||
|short_description=p1@FOXA2 | |short_description=p1@FOXA2 | ||
}} | }} |
Latest revision as of 19:00, 24 September 2015
Short description: | p1@FOXA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000444877_5end |
EntrezGene: | FOXA2 |
HGNC: | 5022 |
UniProt: | E7EPG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.52e-22 | 58 |
epithelial cell | 9.39e-17 | 253 |
respiratory epithelial cell | 1.24e-16 | 13 |
endo-epithelial cell | 1.25e-15 | 42 |
hepatocyte | 3.65e-11 | 12 |
epithelial cell of tracheobronchial tree | 4.63e-10 | 9 |
epithelial cell of lower respiratory tract | 4.63e-10 | 9 |
duct epithelial cell | 8.08e-07 | 3 |
branched duct epithelial cell | 8.08e-07 | 3 |
tracheal epithelial cell | 8.08e-07 | 3 |
tracheoblast | 8.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.84e-09 | 106 |
cell type cancer | 1.03e-07 | 143 |
gastrointestinal system cancer | 5.90e-07 | 14 |