FFCP PHASE1:Hg19::chr16:58426366..58426423,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64785 | |EntrezGene=64785 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25851 | |HGNC=25851 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRX5 | |UniProt=Q9BRX5 | ||
|association_with_transcript=41bp_to_ENST00000318129_5end | |association_with_transcript=41bp_to_ENST00000318129_5end | ||
|cluster_id=chr16:58426366..58426423,+ | |||
|description=CAGE_peak_1_at_GINS3_5end | |description=CAGE_peak_1_at_GINS3_5end | ||
|id=chr16:58426366..58426423,+ | |id=chr16:58426366..58426423,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.75e-23!254;CL:0000076!2.52e-10!62;CL:0002321!1.04e-09!248;CL:0000220!2.85e-09!246;CL:0002139!2.18e-07!24;CL:0000548!3.30e-07!679;CL:0000004!3.30e-07!679;CL:0000255!3.30e-07!679;CL:0000012!4.57e-07!682;CL:0000115!6.44e-07!35;CL:0000213!6.99e-07!57;CL:0000215!6.99e-07!57;CL:0000071!8.64e-07!18;CL:0002546!8.64e-07!18 | |ontology_enrichment_celltype=CL:0000066!8.75e-23!254;CL:0000076!2.52e-10!62;CL:0002321!1.04e-09!248;CL:0000220!2.85e-09!246;CL:0002139!2.18e-07!24;CL:0000548!3.30e-07!679;CL:0000004!3.30e-07!679;CL:0000255!3.30e-07!679;CL:0000012!4.57e-07!682;CL:0000115!6.44e-07!35;CL:0000213!6.99e-07!57;CL:0000215!6.99e-07!57;CL:0000071!8.64e-07!18;CL:0002546!8.64e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.07e-07;24!CL:0000071;7.39e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.79e-23,253;CL:0002321,8.94e-10,250;CL:0000076,1.09e-09,63;CL:0002139,2.14e-07,24;CL:0000115,2.76e-07,36;CL:0000213,3.43e-07,58;CL:0000215,3.43e-07,58;CL:0000071,8.49e-07,18;CL:0002546,8.49e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;7.39e-07;18 | |||
|ontology_enrichment_disease=DOID:162!1.19e-35!235;DOID:14566!5.38e-34!239;DOID:0050687!5.86e-19!143;DOID:305!1.08e-17!106;DOID:0050686!1.51e-16!137;DOID:2531!9.77e-16!51;DOID:0060083!9.77e-16!51;DOID:1240!3.83e-12!39;DOID:8692!1.16e-08!31 | |ontology_enrichment_disease=DOID:162!1.19e-35!235;DOID:14566!5.38e-34!239;DOID:0050687!5.86e-19!143;DOID:305!1.08e-17!106;DOID:0050686!1.51e-16!137;DOID:2531!9.77e-16!51;DOID:0060083!9.77e-16!51;DOID:1240!3.83e-12!39;DOID:8692!1.16e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;6.80e-10;39!DOID:2531;8.03e-10;51!DOID:0060083;8.03e-10;51!DOID:8692;2.92e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.26e-36,235;DOID:14566,4.16e-34,239;DOID:0050687,5.54e-19,143;DOID:305,1.17e-17,106;DOID:0050686,1.44e-16,137;DOID:2531,9.32e-16,51;DOID:0060083,9.32e-16,51;DOID:1240,3.70e-12,39;DOID:8692,1.13e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0001986!8.64e-07!18;UBERON:0004638!8.64e-07!18;UBERON:0004852!8.64e-07!18 | |ontology_enrichment_uberon=UBERON:0001986!8.64e-07!18;UBERON:0004638!8.64e-07!18;UBERON:0004852!8.64e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.39e-07;18!UBERON:0001986;7.39e-07;18!UBERON:0004852;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.49e-07,18;UBERON:0001986,8.49e-07,18;UBERON:0004852,8.49e-07,18 | |||
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| ||
|short_description=p1@GINS3 | |short_description=p1@GINS3 | ||
}} | }} |
Latest revision as of 05:56, 17 September 2015
Short description: | p1@GINS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GINS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000318129_5end |
EntrezGene: | GINS3 |
HGNC: | 25851 |
UniProt: | Q9BRX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.79e-23 | 253 |
embryonic cell | 8.94e-10 | 250 |
squamous epithelial cell | 1.09e-09 | 63 |
endothelial cell of vascular tree | 2.14e-07 | 24 |
endothelial cell | 2.76e-07 | 36 |
lining cell | 3.43e-07 | 58 |
barrier cell | 3.43e-07 | 58 |
blood vessel endothelial cell | 8.49e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.49e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.49e-07 | 18 |
endothelium | 8.49e-07 | 18 |
cardiovascular system endothelium | 8.49e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.26e-36 | 235 |
disease of cellular proliferation | 4.16e-34 | 239 |
cell type cancer | 5.54e-19 | 143 |
carcinoma | 1.17e-17 | 106 |
organ system cancer | 1.44e-16 | 137 |
hematologic cancer | 9.32e-16 | 51 |
immune system cancer | 9.32e-16 | 51 |
leukemia | 3.70e-12 | 39 |
myeloid leukemia | 1.13e-08 | 31 |