FFCP PHASE1:Hg19::chr16:30124030..30124050,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:30124030..30124050,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr16:30124030..30124050,- | |description=CAGE_peak_at_chr16:30124030..30124050,- | ||
|id=chr16:30124030..30124050,- | |id=chr16:30124030..30124050,- | ||
|ontology_enrichment_celltype=CL:0002541!5.93e-08!3;CL:0000181!2.00e-07!12;CL:0000417!2.00e-07!12;CL:0000668!2.00e-07!12;CL:0000414!2.00e-07!12;CL:0000412!2.00e-07!12;CL:0000182!2.00e-07!12 | |ontology_enrichment_celltype=CL:0002541!5.93e-08!3;CL:0000181!2.00e-07!12;CL:0000417!2.00e-07!12;CL:0000668!2.00e-07!12;CL:0000414!2.00e-07!12;CL:0000412!2.00e-07!12;CL:0000182!2.00e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.93e-53;12!CL:0002149;7.01e-08;6!CL:0002255;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.27e-53,12;CL:0000223,1.12e-17,58;CL:0002149,6.78e-08,6;CL:0002255,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.27e-58;11!UBERON:0009497;4.92e-49;13!UBERON:0001041;9.03e-22;30!UBERON:0003104;7.26e-21;31!CL:0000223;1.99e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;1.05e-15;39!DOID:3001;7.01e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:7,6.34e-17,39;DOID:305,5.66e-10,106;DOID:3001,6.78e-08,6;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0009854!2.48e-10!23;UBERON:0009856!4.98e-09!26;UBERON:0008835!4.40e-08!22;UBERON:0003894!4.40e-08!22;UBERON:0000476!5.93e-08!3;UBERON:0000920!5.93e-08!3;UBERON:0003124!4.64e-07!7;UBERON:0007499!4.90e-07!25;UBERON:0009497!4.90e-07!25;UBERON:0000015!4.90e-07!25;UBERON:0002423!4.90e-07!25;UBERON:0006235!4.90e-07!25;UBERON:0004161!4.90e-07!25;UBERON:0002107!8.28e-07!19;UBERON:0006925!8.28e-07!19;UBERON:0008836!8.28e-07!19 | |ontology_enrichment_uberon=UBERON:0009854!2.48e-10!23;UBERON:0009856!4.98e-09!26;UBERON:0008835!4.40e-08!22;UBERON:0003894!4.40e-08!22;UBERON:0000476!5.93e-08!3;UBERON:0000920!5.93e-08!3;UBERON:0003124!4.64e-07!7;UBERON:0007499!4.90e-07!25;UBERON:0009497!4.90e-07!25;UBERON:0000015!4.90e-07!25;UBERON:0002423!4.90e-07!25;UBERON:0006235!4.90e-07!25;UBERON:0004161!4.90e-07!25;UBERON:0002107!8.28e-07!19;UBERON:0006925!8.28e-07!19;UBERON:0008836!8.28e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.35e-34;19!UBERON:0006925;7.35e-34;19!UBERON:0002423;5.94e-26;25!UBERON:0002365;5.90e-20;31!UBERON:0002330;5.90e-20;31!UBERON:0002368;3.78e-18;33!UBERON:0000949;9.22e-14;43!UBERON:0002417;4.33e-09;58!UBERON:0000916;4.33e-09;58!UBERON:0002530;1.90e-07;57!UBERON:0005172;1.93e-07;52!UBERON:0005173;1.93e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.67e-34,19;UBERON:0006925,7.67e-34,19;UBERON:0008836,7.67e-34,19;UBERON:0008835,2.36e-29,22;UBERON:0003894,2.36e-29,22;UBERON:0009854,4.07e-28,23;UBERON:0007499,6.14e-26,25;UBERON:0009497,6.14e-26,25;UBERON:0000015,6.14e-26,25;UBERON:0002423,6.14e-26,25;UBERON:0006235,6.14e-26,25;UBERON:0004161,6.14e-26,25;UBERON:0009856,5.65e-25,26;UBERON:0002365,4.39e-21,31;UBERON:0002330,4.39e-21,31;UBERON:0002368,9.09e-19,35;UBERON:0000949,9.05e-15,45;UBERON:0003929,1.98e-12,54;UBERON:0005172,1.98e-12,54;UBERON:0005173,1.98e-12,54;UBERON:0002530,1.96e-11,59;UBERON:0002417,2.96e-11,60;UBERON:0000916,2.96e-11,60;UBERON:0005911,2.09e-08,82;UBERON:0001041,5.87e-08,87;UBERON:0005177,6.20e-07,101 | |||
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|short_description=p@chr16:30124030..30124050,- | |short_description=p@chr16:30124030..30124050,- | ||
}} | }} |
Latest revision as of 08:05, 25 July 2015
Short description: | p@chr16:30124030..30124050, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:30124030..30124050, - |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.27e-53 | 12 |
endodermal cell | 1.12e-17 | 58 |
epithelial cell of uterus | 6.78e-08 | 6 |
stromal cell of endometrium | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
liver | 7.67e-34 | 19 |
digestive gland | 7.67e-34 | 19 |
liver bud | 7.67e-34 | 19 |
hepatic diverticulum | 2.36e-29 | 22 |
liver primordium | 2.36e-29 | 22 |
digestive tract diverticulum | 4.07e-28 | 23 |
epithelial sac | 6.14e-26 | 25 |
epithelium of foregut-midgut junction | 6.14e-26 | 25 |
anatomical boundary | 6.14e-26 | 25 |
hepatobiliary system | 6.14e-26 | 25 |
foregut-midgut junction | 6.14e-26 | 25 |
septum transversum | 6.14e-26 | 25 |
sac | 5.65e-25 | 26 |
exocrine gland | 4.39e-21 | 31 |
exocrine system | 4.39e-21 | 31 |
endocrine gland | 9.09e-19 | 35 |
endocrine system | 9.05e-15 | 45 |
gut epithelium | 1.98e-12 | 54 |
abdomen element | 1.98e-12 | 54 |
abdominal segment element | 1.98e-12 | 54 |
gland | 1.96e-11 | 59 |
abdominal segment of trunk | 2.96e-11 | 60 |
abdomen | 2.96e-11 | 60 |
endo-epithelium | 2.09e-08 | 82 |
foregut | 5.87e-08 | 87 |
trunk region element | 6.20e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 6.34e-17 | 39 |
carcinoma | 5.66e-10 | 106 |
female reproductive endometrioid cancer | 6.78e-08 | 6 |
cell type cancer | 1.55e-07 | 143 |