FFCP PHASE1:Hg19::chr1:37500020..37500073,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2899 | |EntrezGene=2899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4581 | |HGNC=4581 | ||
|TSSclassifier=strong | |||
|UniProt=A9Z1Z8,Q13003 | |UniProt=A9Z1Z8,Q13003 | ||
|association_with_transcript=-176bp_to_NM_000831,uc001caz.2,uc001cba.1_5end | |association_with_transcript=-176bp_to_NM_000831,uc001caz.2,uc001cba.1_5end | ||
|cluster_id=chr1:37500020..37500073,- | |||
|description=CAGE_peak_2_at_GRIK3_5end | |description=CAGE_peak_2_at_GRIK3_5end | ||
|id=chr1:37500020..37500073,- | |id=chr1:37500020..37500073,- | ||
|ontology_enrichment_celltype=CL:0000047!9.54e-08!8;CL:0002319!2.59e-07!25 | |ontology_enrichment_celltype=CL:0000047!9.54e-08!8;CL:0002319!2.59e-07!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.69e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.10e-14;82!UBERON:0003056;3.67e-07;3 | |||
|ontology_enrichment_disease=DOID:171!1.78e-11!10;DOID:3095!2.75e-11!22;DOID:2994!2.75e-11!22;DOID:169!6.26e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.93e-07;22!DOID:2994;7.93e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.90e-07,22;DOID:2994,7.90e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.07e-59!94;UBERON:0001016!6.07e-59!94;UBERON:0005743!5.03e-55!86;UBERON:0001017!7.09e-55!82;UBERON:0007023!1.69e-52!115;UBERON:0001049!1.82e-51!57;UBERON:0005068!1.82e-51!57;UBERON:0006241!1.82e-51!57;UBERON:0007135!1.82e-51!57;UBERON:0003080!2.48e-44!42;UBERON:0002780!1.82e-43!41;UBERON:0001890!1.82e-43!41;UBERON:0006240!1.82e-43!41;UBERON:0002346!2.37e-43!90;UBERON:0000955!5.14e-43!69;UBERON:0006238!5.14e-43!69;UBERON:0002616!1.31e-42!59;UBERON:0003075!9.83e-40!86;UBERON:0007284!9.83e-40!86;UBERON:0001893!5.60e-36!34;UBERON:0000924!7.96e-36!173;UBERON:0006601!7.96e-36!173;UBERON:0002020!9.62e-36!34;UBERON:0003528!9.62e-36!34;UBERON:0002791!1.15e-34!33;UBERON:0001869!8.17e-34!32;UBERON:0004121!7.88e-33!169;UBERON:0003056!1.60e-32!61;UBERON:0000033!5.81e-27!123;UBERON:0000153!7.22e-27!129;UBERON:0007811!7.22e-27!129;UBERON:0000956!2.88e-26!25;UBERON:0000203!2.88e-26!25;UBERON:0001950!2.20e-24!20;UBERON:0002619!4.57e-24!22;UBERON:0002308!7.85e-11!9;UBERON:0000125!7.85e-11!9;UBERON:0000025!8.16e-11!194;UBERON:0004111!1.41e-09!241;UBERON:0000200!6.22e-09!6;UBERON:0003076!7.29e-09!15;UBERON:0003057!7.29e-09!15;UBERON:0001894!9.00e-09!7;UBERON:0006222!9.00e-09!7;UBERON:0009663!1.14e-08!7;UBERON:0001871!1.72e-08!7;UBERON:0000922!2.00e-08!612;UBERON:0002420!2.05e-08!9;UBERON:0007245!2.05e-08!9;UBERON:0010009!2.05e-08!9;UBERON:0010011!2.05e-08!9;UBERON:0000454!2.05e-08!9;UBERON:0001872!5.56e-08!5;UBERON:0000064!6.03e-08!219;UBERON:0003135!8.64e-08!11;UBERON:0002298!9.14e-08!8;UBERON:0002021!1.94e-07!5;UBERON:0000468!2.16e-07!659;UBERON:0000477!3.30e-07!286;UBERON:0004732!5.94e-07!13;UBERON:0000013!7.08e-07!5;UBERON:0002410!7.08e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.37e-43;41!UBERON:0001890;9.37e-43;41!UBERON:0001893;5.06e-42;34!UBERON:0003528;1.58e-41;34!UBERON:0002020;1.58e-41;34!UBERON:0001869;4.27e-41;32!UBERON:0002791;1.15e-40;32!UBERON:0001950;4.54e-39;20!UBERON:0002619;7.12e-39;22!UBERON:0000073;3.64e-38;53!UBERON:0002616;3.64e-38;53!UBERON:0000956;5.31e-37;25!UBERON:0000203;5.31e-37;25!UBERON:0000955;4.22e-27;68!UBERON:0001017;6.97e-27;75!UBERON:0001016;1.06e-26;83!UBERON:0000200;1.37e-13;6!UBERON:0001894;2.05e-13;7!UBERON:0000125;3.01e-13;9!UBERON:0002308;3.01e-13;9!UBERON:0001872;5.33e-12;5!UBERON:0011216;1.79e-11;132!UBERON:0001871;3.15e-11;6!UBERON:0002021;4.08e-11;5!UBERON:0002420;5.82e-10;9!UBERON:0007245;5.82e-10;9!UBERON:0010009;5.82e-10;9!UBERON:0010011;5.82e-10;9!UBERON:0000454;5.82e-10;9!UBERON:0007023;7.58e-10;114!UBERON:0009663;8.88e-10;7!UBERON:0004732;2.53e-09;13!UBERON:0002298;4.47e-09;6!UBERON:0002784;2.34e-08;4!UBERON:0003296;3.86e-08;4!UBERON:0010133;3.86e-08;4!UBERON:0004733;5.46e-08;12!UBERON:0002028;5.46e-08;12!UBERON:0001870;1.07e-07;3!UBERON:0000988;2.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.35e-75,89;UBERON:0001017,1.86e-72,81;UBERON:0001049,1.92e-69,56;UBERON:0005068,1.92e-69,56;UBERON:0006241,1.92e-69,56;UBERON:0007135,1.92e-69,56;UBERON:0000073,5.97e-67,53;UBERON:0002616,5.97e-67,53;UBERON:0000955,8.29e-63,68;UBERON:0006238,8.29e-63,68;UBERON:0002780,1.01e-61,41;UBERON:0001890,1.01e-61,41;UBERON:0003080,1.01e-61,41;UBERON:0006240,1.01e-61,41;UBERON:0003075,2.38e-50,82;UBERON:0007284,2.38e-50,82;UBERON:0002346,6.84e-50,86;UBERON:0001893,1.39e-49,34;UBERON:0003528,3.16e-49,34;UBERON:0002020,3.16e-49,34;UBERON:0001869,4.35e-46,32;UBERON:0003056,1.17e-45,61;UBERON:0002791,1.27e-45,32;UBERON:0010371,8.20e-41,104;UBERON:0001950,3.37e-39,20;UBERON:0002619,5.47e-39,22;UBERON:0004121,8.54e-38,171;UBERON:0000924,8.54e-38,171;UBERON:0006601,8.54e-38,171;UBERON:0000956,4.57e-37,25;UBERON:0000203,4.57e-37,25;UBERON:0011216,7.54e-32,223;UBERON:0010314,1.18e-27,132;UBERON:0007023,1.98e-27,114;UBERON:0000025,3.29e-14,192;UBERON:0000200,1.40e-13,6;UBERON:0000125,2.24e-13,9;UBERON:0002308,2.24e-13,9;UBERON:0001894,2.55e-13,7;UBERON:0006222,2.55e-13,7;UBERON:0001872,4.94e-12,5;UBERON:0001871,2.68e-11,6;UBERON:0002021,3.74e-11,5;UBERON:0003076,3.09e-10,15;UBERON:0003057,3.09e-10,15;UBERON:0002420,3.60e-10,9;UBERON:0007245,3.60e-10,9;UBERON:0010009,3.60e-10,9;UBERON:0010011,3.60e-10,9;UBERON:0000454,3.60e-10,9;UBERON:0009663,6.26e-10,7;UBERON:0004732,2.84e-09,13;UBERON:0002298,4.40e-09,6;UBERON:0004111,5.65e-09,240;UBERON:0002784,2.27e-08,4;UBERON:0003296,5.12e-08,4;UBERON:0010133,5.12e-08,4;UBERON:0004733,5.97e-08,12;UBERON:0002028,5.97e-08,12;UBERON:0007277,5.97e-08,12;UBERON:0001870,1.08e-07,3;UBERON:0000483,1.39e-07,306;UBERON:0000119,2.17e-07,309;UBERON:0000988,3.02e-07,3;UBERON:0000923,7.08e-07,560;UBERON:0010316,7.08e-07,560;UBERON:0005291,7.08e-07,560;UBERON:0006598,7.08e-07,560;UBERON:0010317,7.08e-07,560;UBERON:0002532,7.08e-07,560 | |||
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|short_description=p2@GRIK3 | |short_description=p2@GRIK3 | ||
}} | }} |
Latest revision as of 21:37, 17 September 2015
Short description: | p2@GRIK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRIK3_5end |
Coexpression cluster: | NA |
Association with transcript: | -176bp_to_NM_000831, uc001caz.2, uc001cba.1_5end |
EntrezGene: | GRIK3 |
HGNC: | 4581 |
UniProt: | A9Z1Z8Q13003 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.90e-07 | 22 |
germ cell cancer | 7.90e-07 | 22 |