FFCP PHASE1:Hg19::chr1:24645807..24645819,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57822 | |EntrezGene=57822 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25839 | |HGNC=25839 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAF0,B2RCL1,Q8TE85 | |UniProt=G3XAF0,B2RCL1,Q8TE85 | ||
|association_with_transcript=0bp_to_ENST00000361548,NM_198173,NM_198174_5end | |association_with_transcript=0bp_to_ENST00000361548,NM_198173,NM_198174_5end | ||
|cluster_id=chr1:24645807..24645819,+ | |||
|description=CAGE_peak_5_at_GRHL3_5end | |description=CAGE_peak_5_at_GRHL3_5end | ||
|id=chr1:24645807..24645819,+ | |id=chr1:24645807..24645819,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.45e-09!254;CL:0002076!1.89e-08!43;CL:0000223!3.47e-07!59 | |ontology_enrichment_celltype=CL:0000066!5.45e-09!254;CL:0002076!1.89e-08!43;CL:0000223!3.47e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000575;1.41e-14;2!CL:0002252;6.18e-08;1!CL:0000150;3.89e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.28e-14,2;CL:0002252,4.11e-08,1;CL:0000150,3.73e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.11e-10;3!UBERON:0003057;5.11e-10;3!UBERON:0009143;2.43e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.47e-10;22!DOID:2994;1.47e-10;22!DOID:3371;1.65e-08;1!DOID:4549;1.65e-08;1!DOID:5861;1.65e-08;1!DOID:6496;1.65e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.31e-10,22;DOID:2994,1.31e-10,22;DOID:3371,1.65e-08,1;DOID:4549,1.65e-08,1;DOID:5861,1.65e-08,1;DOID:6496,1.65e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.61e-16!173;UBERON:0006601!1.61e-16!173;UBERON:0004121!1.87e-16!169;UBERON:0000153!2.46e-12!129;UBERON:0007811!2.46e-12!129;UBERON:0000033!3.44e-12!123;UBERON:0005743!1.45e-11!86;UBERON:0003075!1.47e-11!86;UBERON:0007284!1.47e-11!86;UBERON:0002346!1.62e-11!90;UBERON:0000073!7.68e-11!94;UBERON:0001016!7.68e-11!94;UBERON:0001017!3.35e-10!82;UBERON:0000475!2.31e-09!365;UBERON:0001049!2.52e-09!57;UBERON:0005068!2.52e-09!57;UBERON:0006241!2.52e-09!57;UBERON:0007135!2.52e-09!57;UBERON:0000062!2.57e-09!511;UBERON:0003076!2.72e-09!15;UBERON:0003057!2.72e-09!15;UBERON:0000489!1.10e-08!32;UBERON:0000922!1.10e-08!612;UBERON:0000955!7.39e-08!69;UBERON:0006238!7.39e-08!69;UBERON:0002616!9.93e-08!59;UBERON:0000923!4.70e-07!604;UBERON:0005291!4.70e-07!604;UBERON:0006598!4.70e-07!604;UBERON:0002532!4.70e-07!604;UBERON:0002050!5.48e-07!605;UBERON:0005423!5.48e-07!605;UBERON:0006554!7.46e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0001043;5.11e-10;3!UBERON:0002240;5.11e-10;3!UBERON:0005174;5.11e-10;3!UBERON:0001137;5.11e-10;3!UBERON:0002372;2.43e-08;1!UBERON:0001961;2.43e-08;1!UBERON:0001744;2.43e-08;1!UBERON:0001042;2.43e-08;1!UBERON:0001735;2.43e-08;1!UBERON:0000964;1.01e-07;4!UBERON:0010409;1.01e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,6.11e-11,15;UBERON:0003057,6.11e-11,15;UBERON:0001043,3.82e-10,3;UBERON:0009143,3.82e-10,3;UBERON:0002240,4.38e-10,3;UBERON:0005174,4.38e-10,3;UBERON:0001137,4.38e-10,3;UBERON:0002372,2.19e-08,1;UBERON:0001961,2.19e-08,1;UBERON:0001744,2.19e-08,1;UBERON:0001735,2.19e-08,1;UBERON:0000964,9.64e-08,4;UBERON:0010409,9.64e-08,4;UBERON:0004348,9.64e-08,4;UBERON:0005427,9.64e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.984968464614303,0,2.19418305034661,0,0.136874425072884,0.627713197974014,0,0,0.0787107813136792,0,0,0,0.919421224478927,0.6024118375565,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,2.91436230634034,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0,0.853815942907168,0.530119073285941,0.116193942869518,0.829288440122964,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.301586917234893,0.925884451585296,0,0,0,0.231860809950154,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920809889358963,0,0,0.131124414959424,0.902399225814824,1.46329140498388,0,0,0.211103257785751,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.206082023295445,0.183138929636687,0.742585499285292,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.382838137483752,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,1.34060455107157,0,0,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,1.92283328029452,0,0.245040215981032,0,0,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0.246169610922139,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.1137934482855,2.2882828526349,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0.697118721393016,0.307801034015188,0,1.84451123510448,0.448788222048861,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.063186579628488,0.450970258243478,0.72581733978073,0,0,0,0,0.284609546029793,0,0.867798691675654,0.979923974143776,0.261177619741208,0.17472666824203,0,0,0,0,2.71569246167574,11.5615525965865,0,0,0,0,0.391102765469606,0,0,0,0.288180834308212,0.572682980829578,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.169346664131569,0.795229689809303,0,0.321506296930038,0.275078873194468,0,0.2249738915515,0,0,0.670869375198532,0.157611414598396,0.0524545881349981,0,0.537862017998534,0,0,0,0.76280561296425,0,0,0,0,0,0,0,0,0,1.29282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.332787154610557,0.372578417648301,0.138348634936231,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50109113962448,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,1.53867458491389,0.622077260032973,0,0,0,0,3.73411565898855,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.366857197043358,0.231051332300676,0,0,1.39241355481392,0,0,0,0.785720083444267,0,0.295712172434091,0,0,0,0,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0.0887023701626388,0,0,0.40781839786099,0,0.118193840883968,0.222462803784138,0.078493092850514,0.157115589916002,0.560544326627578,0,0,0.9555033757741,0,0.158013611732727,0.116241425368125,0,0,1.45051314914126,0.85359238546975,0,0.430227358820278,0.118332000730565,0.340853619036631,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,2.55201007249429,0.594092800654172,1.6906229103336,0,0,0,0.499705779624645,0,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,1.38783067318587,1.63898357945543,3.16746252528592,0.407955318967927,1.60330443159336,0.0918948995348449,0.250707539292375,0.0757786982182394,0,0.829169439458779,0.20686599172379,0.852935927603924,0,0,0.0620747142958579,0,0,0,1.95945073107265,0.684466602170562,2.76143417359809,0.143444410785353,0,0.162806537221949,0,0,0.179650404213174,0,0,0,0,0,0 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| ||
|short_description=p5@GRHL3 | |short_description=p5@GRHL3 | ||
}} | }} |
Latest revision as of 22:33, 16 September 2015
Short description: | p5@GRHL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GRHL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000361548, NM_198173, NM_198174_5end |
EntrezGene: | GRHL3 |
HGNC: | 25839 |
UniProt: | G3XAF0B2RCL1Q8TE85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.28e-14 | 2 |
epithelial cell of esophagus | 4.11e-08 | 1 |
glandular epithelial cell | 3.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 6.11e-11 | 15 |
chordal neural plate | 6.11e-11 | 15 |
esophagus | 3.82e-10 | 3 |
esophageal region | 3.82e-10 | 3 |
spinal cord | 4.38e-10 | 3 |
dorsal region element | 4.38e-10 | 3 |
dorsum | 4.38e-10 | 3 |
tonsil | 2.19e-08 | 1 |
mucosa-associated lymphoid tissue | 2.19e-08 | 1 |
lymphoid tissue | 2.19e-08 | 1 |
tonsillar ring | 2.19e-08 | 1 |
cornea | 9.64e-08 | 4 |
eye surface | 9.64e-08 | 4 |
optic eminence | 9.64e-08 | 4 |
corneal primordium | 9.64e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.31e-10 | 22 |
germ cell cancer | 1.31e-10 | 22 |
chondrosarcoma | 1.65e-08 | 1 |
extraosseous chondrosarcoma | 1.65e-08 | 1 |
myxoid chondrosarcoma | 1.65e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 1.65e-08 | 1 |