FFCP PHASE1:Hg19::chr1:237433527..237433549,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6262 | |EntrezGene=6262 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10484 | |HGNC=10484 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-247bp_to_ENST00000542537_5end | |association_with_transcript=-247bp_to_ENST00000542537_5end | ||
|cluster_id=chr1:237433527..237433549,+ | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_3_at_RYR2_5end | |description=CAGE_peak_3_at_RYR2_5end | ||
|id=chr1:237433527..237433549,+ | |id=chr1:237433527..237433549,+ | ||
|ontology_enrichment_celltype=CL:0000080!9.69e-07!6 | |ontology_enrichment_celltype=CL:0000080!9.69e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.13e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.14e-07,25;CL:0000827,2.14e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.96e-21;2 | |||
|ontology_enrichment_disease=DOID:0060060!1.80e-10!1;DOID:0060061!1.80e-10!1;DOID:8691!1.80e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;9.91e-41;1!DOID:0060061;9.91e-41;1!DOID:8691;9.91e-41;1!DOID:0060058;5.90e-17;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,9.91e-41,1;DOID:0060061,9.91e-41,1;DOID:8691,9.91e-41,1;DOID:0060058,5.90e-17,10 | |||
|ontology_enrichment_uberon=UBERON:0002780!4.17e-23!41;UBERON:0001890!4.17e-23!41;UBERON:0006240!4.17e-23!41;UBERON:0003080!1.58e-22!42;UBERON:0000007!4.49e-19!2;UBERON:0001049!2.95e-16!57;UBERON:0005068!2.95e-16!57;UBERON:0006241!2.95e-16!57;UBERON:0007135!2.95e-16!57;UBERON:0000349!6.59e-16!5;UBERON:0002420!1.07e-15!9;UBERON:0007245!1.07e-15!9;UBERON:0010009!1.07e-15!9;UBERON:0010011!1.07e-15!9;UBERON:0000454!1.07e-15!9;UBERON:0002616!1.17e-15!59;UBERON:0000955!1.67e-15!69;UBERON:0006238!1.67e-15!69;UBERON:0003056!4.28e-15!61;UBERON:0002791!4.50e-15!33;UBERON:0001893!1.29e-14!34;UBERON:0001017!8.46e-13!82;UBERON:0007023!2.53e-12!115;UBERON:0005743!3.97e-12!86;UBERON:0001894!4.16e-12!7;UBERON:0006222!4.16e-12!7;UBERON:0001869!5.25e-12!32;UBERON:0009663!8.14e-12!7;UBERON:0002020!2.80e-11!34;UBERON:0003528!2.80e-11!34;UBERON:0000073!8.09e-11!94;UBERON:0001016!8.09e-11!94;UBERON:0003075!2.97e-10!86;UBERON:0007284!2.97e-10!86;UBERON:0003296!5.31e-10!4;UBERON:0010133!5.31e-10!4;UBERON:0002336!9.82e-10!1;UBERON:0001018!9.82e-10!1;UBERON:0002473!9.82e-10!1;UBERON:0005340!9.82e-10!1;UBERON:0002316!9.82e-10!1;UBERON:0003544!9.82e-10!1;UBERON:0001020!9.82e-10!1;UBERON:0005970!9.82e-10!1;UBERON:0002437!9.82e-10!1;UBERON:0002346!1.00e-09!90;UBERON:0001882!1.07e-09!1;UBERON:0005403!1.07e-09!1;UBERON:0000369!1.28e-09!4;UBERON:0002435!1.28e-09!4;UBERON:0000204!1.28e-09!4;UBERON:0010082!1.28e-09!4;UBERON:0002308!2.64e-09!9;UBERON:0000125!2.64e-09!9;UBERON:0000033!5.96e-08!123;UBERON:0000153!1.70e-07!129;UBERON:0007811!1.70e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.22e-79;2!UBERON:0003296;3.31e-40;4!UBERON:0010133;3.31e-40;4!UBERON:0001894;1.61e-23;7!UBERON:0001873;6.96e-21;2!UBERON:0005383;2.09e-14;3!UBERON:0005382;2.09e-14;3!UBERON:0000369;3.79e-11;4!UBERON:0002435;3.79e-11;4!UBERON:0000204;3.79e-11;4!UBERON:0002780;1.05e-09;41!UBERON:0001890;1.05e-09;41!UBERON:0000073;2.08e-07;53!UBERON:0002616;2.08e-07;53!UBERON:0009663;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.22e-79,2;UBERON:0003296,3.31e-40,4;UBERON:0010133,3.31e-40,4;UBERON:0001894,1.61e-23,7;UBERON:0006222,1.61e-23,7;UBERON:0001873,6.96e-21,2;UBERON:0010122,6.96e-21,2;UBERON:0005383,2.09e-14,3;UBERON:0005382,2.09e-14,3;UBERON:0000369,3.79e-11,4;UBERON:0002435,3.79e-11,4;UBERON:0000204,3.79e-11,4;UBERON:0010082,3.79e-11,4;UBERON:0002780,2.90e-09,41;UBERON:0001890,2.90e-09,41;UBERON:0003080,2.90e-09,41;UBERON:0006240,2.90e-09,41;UBERON:0000073,2.27e-07,53;UBERON:0002616,2.27e-07,53;UBERON:0001049,5.09e-07,56;UBERON:0005068,5.09e-07,56;UBERON:0006241,5.09e-07,56;UBERON:0007135,5.09e-07,56;UBERON:0009663,6.39e-07,7 | |||
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|short_description=p3@RYR2 | |short_description=p3@RYR2 | ||
}} | }} |
Latest revision as of 15:20, 16 September 2015
Short description: | p3@RYR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RYR2_5end |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | -247bp_to_ENST00000542537_5end |
EntrezGene: | RYR2 |
HGNC: | 10484 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.14e-07 | 25 |
pro-T cell | 2.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.22e-79 | 2 |
gland of diencephalon | 3.31e-40 | 4 |
neuroendocrine gland | 3.31e-40 | 4 |
diencephalon | 1.61e-23 | 7 |
future diencephalon | 1.61e-23 | 7 |
caudate nucleus | 6.96e-21 | 2 |
future caudate nucleus | 6.96e-21 | 2 |
caudate-putamen | 2.09e-14 | 3 |
dorsal striatum | 2.09e-14 | 3 |
corpus striatum | 3.79e-11 | 4 |
striatum | 3.79e-11 | 4 |
ventral part of telencephalon | 3.79e-11 | 4 |
future corpus striatum | 3.79e-11 | 4 |
regional part of forebrain | 2.90e-09 | 41 |
forebrain | 2.90e-09 | 41 |
anterior neural tube | 2.90e-09 | 41 |
future forebrain | 2.90e-09 | 41 |
regional part of nervous system | 2.27e-07 | 53 |
regional part of brain | 2.27e-07 | 53 |
neural tube | 5.09e-07 | 56 |
neural rod | 5.09e-07 | 56 |
future spinal cord | 5.09e-07 | 56 |
neural keel | 5.09e-07 | 56 |
telencephalic nucleus | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 9.91e-41 | 1 |
cutaneous T cell lymphoma | 9.91e-41 | 1 |
mycosis fungoides | 9.91e-41 | 1 |
lymphoma | 5.90e-17 | 10 |