FFCP PHASE1:Hg19::chr11:59612969..59612994,-: Difference between revisions
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|id=chr11:59612969..59612994,-
|short_description=p1@GIF
|description=CAGE_peak_1_at_GIF_5end
|association_with_transcript=0bp_to_ENST00000257248,ENST00000525058,EN...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2694 | |EntrezGene=2694 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4268 | |HGNC=4268 | ||
|UniProt=P27352, | |TSSclassifier=strong | ||
|UniProt=P27352,E9PM21 | |||
|association_with_transcript=0bp_to_ENST00000257248,ENST00000525058,ENST00000532070,ENST00000541311,NM_005142,uc001noi.2,uc010rkz.1_5end | |||
|cluster_id=chr11:59612969..59612994,- | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_1_at_GIF_5end | |||
|id=chr11:59612969..59612994,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002336!8.86e-17!1;UBERON:0001018!8.86e-17!1;UBERON:0002473!8.86e-17!1;UBERON:0005340!8.86e-17!1;UBERON:0002316!8.86e-17!1;UBERON:0003544!8.86e-17!1;UBERON:0001020!8.86e-17!1;UBERON:0005970!8.86e-17!1;UBERON:0002437!8.86e-17!1;UBERON:0005409!3.69e-15!35;UBERON:0000160!1.03e-13!27;UBERON:0002108!6.59e-10!14;UBERON:0005162!4.70e-09!2;UBERON:0000122!4.70e-09!2;UBERON:0001870!8.09e-09!2;UBERON:0007023!8.47e-08!115;UBERON:0001155!1.17e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.46e-59;4!UBERON:0002336;7.06e-34;1!UBERON:0011215;7.06e-34;1!UBERON:0001018;7.06e-34;1!UBERON:0002473;7.06e-34;1!UBERON:0005340;7.06e-34;1!UBERON:0003544;7.06e-34;1!UBERON:0005970;7.06e-34;1!UBERON:0002316;7.06e-34;1!UBERON:0001020;7.06e-34;1!UBERON:0002437;7.06e-34;1!UBERON:0005409;1.84e-23;22!UBERON:0005162;1.07e-17;2!UBERON:0000122;1.07e-17;2!UBERON:0000160;3.49e-17;17!UBERON:0004921;7.05e-14;33!UBERON:0002114;2.31e-12;2!UBERON:0000922;1.10e-08;49!UBERON:0001555;3.98e-08;54!UBERON:0000945;5.35e-08;5!UBERON:0010039;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.46e-59,4;UBERON:0002336,7.06e-34,1;UBERON:0011215,7.06e-34,1;UBERON:0001018,7.06e-34,1;UBERON:0002473,7.06e-34,1;UBERON:0005340,7.06e-34,1;UBERON:0003544,7.06e-34,1;UBERON:0005970,7.06e-34,1;UBERON:0002316,7.06e-34,1;UBERON:0001020,7.06e-34,1;UBERON:0002437,7.06e-34,1;UBERON:0005409,7.73e-21,25;UBERON:0005162,1.07e-17,2;UBERON:0000122,1.07e-17,2;UBERON:0000160,3.49e-17,17;UBERON:0002114,2.31e-12,2 | |||
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|short_description=p1@GIF | |||
}} | }} |
Latest revision as of 12:48, 18 September 2015
Short description: | p1@GIF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GIF_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 0bp_to_ENST00000257248, ENST00000525058, ENST00000532070, ENST00000541311, NM_005142, uc001noi.2, uc010rkz.1_5end |
EntrezGene: | GIF |
HGNC: | 4268 |
UniProt: | P27352E9PM21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 2.46e-59 | 4 |
corpus callosum | 7.06e-34 | 1 |
central nervous system cell part cluster | 7.06e-34 | 1 |
axon tract | 7.06e-34 | 1 |
intercerebral commissure | 7.06e-34 | 1 |
dorsal telencephalic commissure | 7.06e-34 | 1 |
brain white matter | 7.06e-34 | 1 |
brain commissure | 7.06e-34 | 1 |
white matter | 7.06e-34 | 1 |
nervous system commissure | 7.06e-34 | 1 |
cerebral hemisphere white matter | 7.06e-34 | 1 |
gastrointestinal system | 7.73e-21 | 25 |
multi cell component structure | 1.07e-17 | 2 |
neuron projection bundle | 1.07e-17 | 2 |
intestine | 3.49e-17 | 17 |
duodenum | 2.31e-12 | 2 |