FFCP PHASE1:Hg19::chr1:21952870..21952889,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5909 | |EntrezGene=5909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9858 | |HGNC=9858 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z357 | |UniProt=F2Z357 | ||
|association_with_transcript=0bp_to_ENST00000471600_5end | |association_with_transcript=0bp_to_ENST00000471600_5end | ||
|cluster_id=chr1:21952870..21952889,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_7_at_RAP1GAP_5end | |description=CAGE_peak_7_at_RAP1GAP_5end | ||
|id=chr1:21952870..21952889,- | |id=chr1:21952870..21952889,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.84e-16;2!UBERON:0006215;1.03e-10;3!UBERON:0006222;3.87e-09;1!UBERON:0008801;1.17e-08;1!UBERON:0006601;9.98e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.28e-45!57;UBERON:0005068!3.28e-45!57;UBERON:0006241!3.28e-45!57;UBERON:0007135!3.28e-45!57;UBERON:0002020!3.13e-41!34;UBERON:0003528!3.13e-41!34;UBERON:0001893!9.93e-41!34;UBERON:0002791!4.79e-39!33;UBERON:0002616!3.23e-38!59;UBERON:0002780!4.16e-38!41;UBERON:0001890!4.16e-38!41;UBERON:0006240!4.16e-38!41;UBERON:0001869!1.05e-37!32;UBERON:0003080!5.42e-37!42;UBERON:0001017!7.90e-37!82;UBERON:0000955!9.47e-35!69;UBERON:0006238!9.47e-35!69;UBERON:0005743!1.58e-34!86;UBERON:0002619!1.29e-32!22;UBERON:0000073!4.68e-30!94;UBERON:0001016!4.68e-30!94;UBERON:0007023!5.09e-30!115;UBERON:0001950!5.97e-29!20;UBERON:0000956!4.08e-28!25;UBERON:0000203!4.08e-28!25;UBERON:0003075!7.89e-28!86;UBERON:0007284!7.89e-28!86;UBERON:0002346!4.60e-26!90;UBERON:0003056!1.02e-22!61;UBERON:0000033!3.73e-19!123;UBERON:0000153!1.05e-17!129;UBERON:0007811!1.05e-17!129;UBERON:0004121!1.58e-17!169;UBERON:0001871!1.79e-17!7;UBERON:0000924!8.34e-17!173;UBERON:0006601!8.34e-17!173;UBERON:0002420!4.30e-15!9;UBERON:0007245!4.30e-15!9;UBERON:0010009!4.30e-15!9;UBERON:0010011!4.30e-15!9;UBERON:0000454!4.30e-15!9;UBERON:0002308!1.21e-14!9;UBERON:0000125!1.21e-14!9;UBERON:0000200!5.55e-13!6;UBERON:0009663!3.55e-11!7;UBERON:0000349!4.02e-11!5;UBERON:0000025!1.19e-09!194;UBERON:0000369!1.21e-09!4;UBERON:0002435!1.21e-09!4;UBERON:0000204!1.21e-09!4;UBERON:0010082!1.21e-09!4;UBERON:0003076!2.00e-09!15;UBERON:0003057!2.00e-09!15;UBERON:0004111!3.38e-08!241;UBERON:0002298!3.81e-08!8;UBERON:0005383!6.59e-08!3;UBERON:0005382!6.59e-08!3;UBERON:0002771!1.13e-07!3;UBERON:0004733!2.98e-07!12;UBERON:0002028!2.98e-07!12;UBERON:0007277!2.98e-07!12;UBERON:0006331!6.36e-07!3;UBERON:0000477!6.68e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;1.35e-37;6!UBERON:0002791;1.08e-33;32!UBERON:0001869;1.12e-33;32!UBERON:0001950;1.69e-33;20!UBERON:0001893;1.73e-31;34!UBERON:0003528;2.11e-31;34!UBERON:0002020;2.11e-31;34!UBERON:0002619;1.89e-30;22!UBERON:0000956;9.36e-27;25!UBERON:0000203;9.36e-27;25!UBERON:0002780;7.66e-26;41!UBERON:0001890;7.66e-26;41!UBERON:0005383;1.29e-23;3!UBERON:0005382;1.29e-23;3!UBERON:0001017;1.87e-23;75!UBERON:0000955;8.76e-22;68!UBERON:0000073;1.95e-21;53!UBERON:0002616;1.95e-21;53!UBERON:0002420;9.30e-21;9!UBERON:0007245;9.30e-21;9!UBERON:0010009;9.30e-21;9!UBERON:0010011;9.30e-21;9!UBERON:0000454;9.30e-21;9!UBERON:0000200;6.13e-20;6!UBERON:0000369;7.22e-18;4!UBERON:0002435;7.22e-18;4!UBERON:0000204;7.22e-18;4!UBERON:0001873;3.84e-16;2!UBERON:0002771;5.82e-16;2!UBERON:0001016;8.15e-16;83!UBERON:0001876;1.33e-15;2!UBERON:0002702;1.33e-15;2!UBERON:0001870;1.03e-10;3!UBERON:0009663;1.94e-10;7!UBERON:0001874;3.06e-09;1!UBERON:0011216;6.80e-09;132!UBERON:0003112;1.17e-08;1!UBERON:0001831;1.17e-08;1!UBERON:0011158;1.17e-08;1!UBERON:0003128;1.17e-08;1!UBERON:0001567;1.17e-08;1!UBERON:0001703;1.17e-08;1!UBERON:0002241;1.17e-08;1!UBERON:0000125;3.19e-08;9!UBERON:0002308;3.19e-08;9!UBERON:0007023;4.50e-07;114!UBERON:0001872;6.64e-07;5!UBERON:0000349;9.17e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.30e-39,56;UBERON:0005068,5.30e-39,56;UBERON:0006241,5.30e-39,56;UBERON:0007135,5.30e-39,56;UBERON:0001871,6.31e-38,6;UBERON:0002780,3.33e-37,41;UBERON:0001890,3.33e-37,41;UBERON:0003080,3.33e-37,41;UBERON:0006240,3.33e-37,41;UBERON:0000073,1.03e-36,53;UBERON:0002616,1.03e-36,53;UBERON:0002791,5.98e-36,32;UBERON:0001869,5.98e-36,32;UBERON:0001017,7.07e-36,81;UBERON:0000955,6.49e-35,68;UBERON:0006238,6.49e-35,68;UBERON:0003528,9.20e-34,34;UBERON:0002020,9.20e-34,34;UBERON:0001893,9.20e-34,34;UBERON:0001950,9.73e-34,20;UBERON:0001016,5.29e-32,89;UBERON:0002619,1.14e-30,22;UBERON:0000956,6.01e-27,25;UBERON:0000203,6.01e-27,25;UBERON:0003075,9.56e-26,82;UBERON:0007284,9.56e-26,82;UBERON:0002346,2.08e-24,86;UBERON:0003056,2.63e-24,61;UBERON:0005383,8.49e-24,3;UBERON:0005382,8.49e-24,3;UBERON:0010371,4.39e-22,104;UBERON:0002420,4.72e-21,9;UBERON:0007245,4.72e-21,9;UBERON:0010009,4.72e-21,9;UBERON:0010011,4.72e-21,9;UBERON:0000454,4.72e-21,9;UBERON:0000200,3.75e-20,6;UBERON:0007023,4.57e-20,114;UBERON:0004121,1.24e-18,171;UBERON:0000924,1.24e-18,171;UBERON:0006601,1.24e-18,171;UBERON:0000369,5.30e-18,4;UBERON:0002435,5.30e-18,4;UBERON:0000204,5.30e-18,4;UBERON:0010082,5.30e-18,4;UBERON:0010314,1.15e-16,132;UBERON:0001873,2.53e-16,2;UBERON:0010122,2.53e-16,2;UBERON:0002771,3.71e-16,2;UBERON:0001876,5.83e-16,2;UBERON:0002702,9.87e-16,2;UBERON:0011216,9.31e-15,223;UBERON:0001870,8.47e-11,3;UBERON:0009663,1.63e-10,7;UBERON:0000025,2.20e-10,192;UBERON:0001874,3.06e-09,1;UBERON:0004111,1.25e-08,240;UBERON:0003112,1.91e-08,1;UBERON:0011158,1.91e-08,1;UBERON:0003128,1.91e-08,1;UBERON:0001703,1.91e-08,1;UBERON:0002241,1.91e-08,1;UBERON:0004761,1.91e-08,1;UBERON:0009617,1.91e-08,1;UBERON:0001831,2.06e-08,1;UBERON:0001567,2.06e-08,1;UBERON:0008801,2.06e-08,1;UBERON:0000125,2.80e-08,9;UBERON:0002308,2.80e-08,9;UBERON:0001872,6.65e-07,5;UBERON:0000349,6.65e-07,5 | |||
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|short_description=p7@RAP1GAP | |short_description=p7@RAP1GAP | ||
}} | }} |
Latest revision as of 05:53, 25 September 2015
Short description: | p7@RAP1GAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RAP1GAP_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000471600_5end |
EntrezGene: | RAP1GAP |
HGNC: | 9858 |
UniProt: | F2Z357 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data