FFCP PHASE1:Hg19::chr1:218519119..218519130,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7042 | |EntrezGene=7042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11768 | |HGNC=11768 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-260bp_to_uc001hll.2,uc001hlm.2,uc001hln.2,uc001hlo.2,uc010pue.1_5end | |association_with_transcript=-260bp_to_uc001hll.2,uc001hlm.2,uc001hln.2,uc001hlo.2,uc010pue.1_5end | ||
|cluster_id=chr1:218519119..218519130,+ | |||
|coexpression_cluster_id=C927 | |||
|description=CAGE_peak_16_at_TGFB2_5end | |description=CAGE_peak_16_at_TGFB2_5end | ||
|id=chr1:218519119..218519130,+ | |id=chr1:218519119..218519130,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.59e-17;3!CL:0000067;1.59e-17;3!CL:0005012;1.59e-17;3!CL:0002304;1.59e-17;3!CL:0002549;1.01e-11;2!CL:0000708;1.93e-08;3!CL:0000222;4.17e-07;1!CL:0000306;9.51e-07;4!CL:0002222;9.51e-07;4!CL:0002224;9.51e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.95e-17,3;CL:0000067,2.95e-17,3;CL:0005012,2.95e-17,3;CL:0002304,2.95e-17,3;CL:0002549,9.06e-12,2;CL:0000708,2.20e-08,3;CL:0000511,5.57e-07,1;CL:0002625,5.57e-07,1;CL:0000216,5.57e-07,1;CL:0000306,8.77e-07,4;CL:0002222,8.77e-07,4;CL:0002224,8.77e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.17e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3571,8.27e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000119!1.07e-11!312;UBERON:0000475!1.33e-10!365;UBERON:0000477!1.61e-10!286;UBERON:0000483!1.84e-10!309;UBERON:0000481!5.33e-10!347;UBERON:0004111!1.24e-09!241;UBERON:0000025!2.89e-08!194;UBERON:0002200!6.63e-08!11;UBERON:0006876!6.63e-08!11;UBERON:0005743!9.84e-08!86;UBERON:0000033!1.56e-07!123;UBERON:0003075!1.77e-07!86;UBERON:0007284!1.77e-07!86;UBERON:0000073!2.06e-07!94;UBERON:0001016!2.06e-07!94;UBERON:0001017!2.26e-07!82;UBERON:0002346!3.61e-07!90;UBERON:0004121!4.28e-07!169;UBERON:0000153!4.49e-07!129;UBERON:0007811!4.49e-07!129;UBERON:0000924!6.10e-07!173;UBERON:0006601!6.10e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;1.70e-22;4!UBERON:0007625;5.57e-18;11!UBERON:0001778;1.59e-17;3!UBERON:0001775;1.59e-17;3!UBERON:0006876;1.81e-17;11!UBERON:0002203;4.65e-15;6!UBERON:0001768;4.65e-15;6!UBERON:0002200;4.65e-15;6!UBERON:0001801;5.28e-14;14!UBERON:0005629;1.01e-11;2!UBERON:0005358;1.01e-11;2!UBERON:0001886;1.01e-11;2!UBERON:0004086;1.01e-11;2!UBERON:0005282;1.01e-11;2!UBERON:0005281;1.01e-11;2!UBERON:0000019;3.69e-10;19!UBERON:0000047;3.69e-10;19!UBERON:0004088;3.69e-10;19!UBERON:0010230;3.69e-10;19!UBERON:0000970;1.27e-09;20!UBERON:0002104;3.92e-09;21!UBERON:0001456;3.92e-09;21!UBERON:0003210;1.93e-08;3!UBERON:0001280;2.27e-08;3!UBERON:0004647;2.27e-08;3!UBERON:0000020;2.76e-08;23!UBERON:0002114;4.22e-08;2!UBERON:0001032;6.48e-08;24!UBERON:0004456;6.48e-08;24!UBERON:0002294;7.99e-08;7!UBERON:0001173;7.99e-08;7!UBERON:0010371;1.24e-07;31!UBERON:0001282;4.17e-07;1!UBERON:0009842;4.17e-07;1!UBERON:0003704;4.17e-07;1!UBERON:0001171;4.17e-07;1!UBERON:0001172;4.17e-07;1!UBERON:0010077;9.51e-07;4!UBERON:0005389;9.51e-07;4!UBERON:0000484;9.51e-07;4!UBERON:0000965;9.51e-07;4!UBERON:0001803;9.51e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,6.06e-22,4;UBERON:0007625,1.01e-17,11;UBERON:0001778,2.95e-17,3;UBERON:0001775,2.95e-17,3;UBERON:0006876,3.35e-17,11;UBERON:0002203,1.07e-14,6;UBERON:0001768,1.07e-14,6;UBERON:0002200,1.07e-14,6;UBERON:0001801,8.40e-14,14;UBERON:0005629,9.06e-12,2;UBERON:0005358,9.06e-12,2;UBERON:0001886,9.06e-12,2;UBERON:0004086,9.06e-12,2;UBERON:0005282,9.06e-12,2;UBERON:0005281,9.06e-12,2;UBERON:0002294,2.91e-10,9;UBERON:0001173,2.91e-10,9;UBERON:0004912,2.91e-10,9;UBERON:0000019,1.75e-09,20;UBERON:0000047,1.75e-09,20;UBERON:0010312,1.75e-09,20;UBERON:0004088,1.75e-09,20;UBERON:0010230,1.75e-09,20;UBERON:0003072,1.75e-09,20;UBERON:0004128,1.75e-09,20;UBERON:0003071,1.75e-09,20;UBERON:0000970,5.27e-09,21;UBERON:0002104,5.27e-09,21;UBERON:0002394,5.73e-09,6;UBERON:0003928,5.73e-09,6;UBERON:0001456,1.44e-08,22;UBERON:0003210,2.20e-08,3;UBERON:0001280,2.20e-08,3;UBERON:0004647,2.20e-08,3;UBERON:0005171,2.20e-08,3;UBERON:0002114,2.55e-08,2;UBERON:0005085,6.43e-08,31;UBERON:0000020,8.38e-08,24;UBERON:0001032,8.38e-08,24;UBERON:0004456,8.38e-08,24;UBERON:0000058,3.76e-07,19;UBERON:0001282,4.69e-07,1;UBERON:0009842,4.69e-07,1;UBERON:0003704,4.69e-07,1;UBERON:0001171,4.69e-07,1;UBERON:0001172,4.69e-07,1;UBERON:0004913,5.26e-07,1;UBERON:0003703,5.26e-07,1;UBERON:0001174,5.26e-07,1;UBERON:0004914,5.26e-07,1;UBERON:0001136,5.57e-07,1;UBERON:0001343,5.57e-07,1;UBERON:0004910,5.57e-07,1;UBERON:0005154,5.57e-07,1;UBERON:0005295,5.57e-07,1;UBERON:0004813,5.57e-07,1;UBERON:0005297,5.57e-07,1;UBERON:0005294,5.57e-07,1;UBERON:0010141,5.57e-07,1;UBERON:0005891,5.57e-07,1;UBERON:0010077,8.77e-07,4;UBERON:0005389,8.77e-07,4;UBERON:0000484,8.77e-07,4;UBERON:0002546,8.77e-07,4;UBERON:0000965,8.77e-07,4;UBERON:0001803,8.77e-07,4;UBERON:0003073,8.77e-07,4;UBERON:0005426,8.77e-07,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.369363174230364,1.42800483870977,0,0,0.410623275218653,1.12988375635323,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.434539556882471,1.5905718941022,0,1.03988298880475,2.21729397462564,2.3715392137144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,1.19168262731897,0.286836620748814,0,1.12135520028461,0,0.74000264525148,0.311211035399766,0,0,1.51357427644931,1.15235184896,0,0,0,0,0,0,0,0.408308342509787,0,0.309977343527296,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.901428353439581,0.226864366320042,0.358779271377724,0.640672166455702,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,2.88662684050547,0.231860809950154,5.4007999348478,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23344192779897,3.92364061949952,0.7333828582095,0.387815147273333,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.535286966391485,0,0,0,0,0,0,0,0,0.783204629850962,0.686286847621712,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0.229628896329213,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0,0.431831832204279,0,0,1.50506932156456,0,0,0.223874754722178,0,0,0,0.984043937099117,0,0.103041011647722,0.366277859273374,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0,0.275673144969061,0,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0.127612712494584,0,0,0.62962469366128,0,0.616067160352178,0,0,0.18532421910392,0.858749320451947,0.744316738719335,0.949138274156178,0.38126038784765,0,0.42793898803392,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0.655894752046633,0.202910376962704,0,0,0.143411352204052,0.785992328104969,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0.281338832821026,0.111308705022906,0,1.26675244876796,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,2.16489906109302,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0,0,0,0,0.63186579628488,0,0,0,0.330991955875499,1.2557316736289,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0,0,0,0,0.677942222341597,0.274083849293502,0,0.0633107959558787,0.195551382734803,3.36667045056442,0,0.19980960958213,0,0.80175617316141,0,0,0,0,0,0.313808538937,1.12198039399954,0,0,0.273810757783986,0,0,0,0.837847203816763,0,0.717873024576814,0,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0.105600336519406,0.537862017998534,0,0,0,0,0.542999601753713,0,0,0,0,0.681552087141687,0.226624183040251,0,0,0.129282956361551,0,0.342173675768659,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0.471162288750703,0,0,0.250381861413,0,0,0.434674820589684,0,1.24980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.443565449968902,0,0.899606224327209,0.621051827505038,0,0,0,0.150257608997218,0,0.406870733204662,0.363697318405119,0.107410557042488,0,0.398095888698616,0.400027764663154,0,0,2.52369796457302,0,0,0.782982875895635,0.680117776536817,0,0,0.537266523244462,0.308801447160972,0,0.176689145945881,0,0,0,1.38172136692479,0,0,0,0,0,0.982829546539238,0.245772908753719,0,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0,0.918736432059601,0.192687675289379,0,0.798169295285756,0,0.252071696221718,0.207471757392654,0,0,0,0.11796972334774,0.183428598521679,0.115525666150338,1.52552838186867,0,0.397832444232549,0,1.0085253435176,0,0,0,1.6264169483875,0.0675375846183947,0,0.620060389503552,0.126831620387814,0,0,0,0,0.766574565837572,0,0,0,0,0.0887023701626388,0,0.342976018874837,0.0679697329768317,0.263091094251396,0.118193840883968,0,0.313972371402056,0,0,0,0.431855182437243,0,0.214429632529969,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0.10266280685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| ||
|short_description=p16@TGFB2 | |short_description=p16@TGFB2 | ||
}} | }} |
Latest revision as of 04:31, 25 September 2015
Short description: | p16@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TGFB2_5end |
Coexpression cluster: | C927_Lens_gall_Ciliary_mesodermal_Fibroblast_Meningeal_cholangiocellular |
Association with transcript: | -260bp_to_uc001hll.2, uc001hlm.2, uc001hln.2, uc001hlo.2, uc010pue.1_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.95e-17 | 3 |
ciliated epithelial cell | 2.95e-17 | 3 |
multi-ciliated epithelial cell | 2.95e-17 | 3 |
non-pigmented ciliary epithelial cell | 2.95e-17 | 3 |
fibroblast of choroid plexus | 9.06e-12 | 2 |
leptomeningeal cell | 2.20e-08 | 3 |
androgen binding protein secreting cell | 5.57e-07 | 1 |
seminiferous tubule epithelial cell | 5.57e-07 | 1 |
Sertoli cell | 5.57e-07 | 1 |
crystallin accumulating cell | 8.77e-07 | 4 |
vertebrate lens cell | 8.77e-07 | 4 |
lens epithelial cell | 8.77e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 8.27e-07 | 1 |