FFCP PHASE1:Hg19::chr1:158323605..158323616,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |EntrezGene=913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1638 | |HGNC=1638 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000452291_5end | |association_with_transcript=-17bp_to_ENST00000452291_5end | ||
|cluster_id=chr1:158323605..158323616,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_4_at_CD1E_5end | |description=CAGE_peak_4_at_CD1E_5end | ||
|id=chr1:158323605..158323616,+ | |id=chr1:158323605..158323616,+ | ||
|ontology_enrichment_celltype=CL:0000990!7.49e-32!8;CL:0000451!5.36e-26!10;CL:0000840!4.67e-22!5;CL:0001029!4.67e-22!5;CL:0000453!5.63e-15!5 | |ontology_enrichment_celltype=CL:0000990!7.49e-32!8;CL:0000451!5.36e-26!10;CL:0000840!4.67e-22!5;CL:0001029!4.67e-22!5;CL:0000453!5.63e-15!5 | ||
|ontology_enrichment_celltype_v019=CL:0000840;3.56e-33;5!CL:0000990;2.11e-22;8!CL:0000451;1.79e-18;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,3.98e-33,5;CL:0001029,3.98e-33,5;CL:0000990,2.27e-22,8;CL:0000451,1.90e-18,10 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.59e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!2.52e-13!10;UBERON:0009145!2.52e-13!10;UBERON:0006562!3.94e-12!11;UBERON:0004177!4.04e-11!7;UBERON:0002370!2.17e-09!4;UBERON:0005058!2.17e-09!4;UBERON:0009113!2.17e-09!4;UBERON:0003295!2.17e-09!4;UBERON:0005562!2.17e-09!4;UBERON:0002372!3.00e-09!1;UBERON:0001961!3.00e-09!1;UBERON:0001744!3.00e-09!1;UBERON:0001735!3.00e-09!1;UBERON:0001301!3.25e-09!1;UBERON:0006834!4.87e-09!1;UBERON:0000974!4.85e-08!10;UBERON:0001557!4.48e-07!19;UBERON:0002193!8.56e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.03e-45;2!UBERON:0005058;2.03e-45;2!UBERON:0009113;2.03e-45;2!UBERON:0004177;7.24e-19;5!UBERON:0005057;7.24e-19;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.63e-23,4;UBERON:0005058,2.63e-23,4;UBERON:0009113,2.63e-23,4;UBERON:0003295,2.63e-23,4;UBERON:0005562,2.63e-23,4;UBERON:0003351,6.71e-16,6;UBERON:0004177,8.94e-14,7;UBERON:0005057,8.94e-14,7;UBERON:0000974,6.20e-10,10;UBERON:0003408,6.20e-10,10;UBERON:0001042,6.20e-10,10;UBERON:0009145,6.20e-10,10;UBERON:0006562,4.08e-09,11;UBERON:0009722,4.08e-09,11;UBERON:0007690,4.08e-09,11 | |||
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|short_description=p4@CD1E | |short_description=p4@CD1E | ||
}} | }} |
Latest revision as of 21:00, 17 September 2015
Short description: | p4@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD1E_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -17bp_to_ENST00000452291_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 3.98e-33 | 5 |
common dendritic progenitor | 3.98e-33 | 5 |
conventional dendritic cell | 2.27e-22 | 8 |
dendritic cell | 1.90e-18 | 10 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.63e-23 | 4 |
hemolymphoid system gland | 2.63e-23 | 4 |
thymic region | 2.63e-23 | 4 |
pharyngeal gland | 2.63e-23 | 4 |
thymus primordium | 2.63e-23 | 4 |
pharyngeal epithelium | 6.71e-16 | 6 |
hemopoietic organ | 8.94e-14 | 7 |
immune organ | 8.94e-14 | 7 |
neck | 6.20e-10 | 10 |
gland of gut | 6.20e-10 | 10 |
chordate pharynx | 6.20e-10 | 10 |
pharyngeal region of foregut | 6.20e-10 | 10 |
pharynx | 4.08e-09 | 11 |
entire pharyngeal arch endoderm | 4.08e-09 | 11 |
early pharyngeal endoderm | 4.08e-09 | 11 |