FFCP PHASE1:Hg19::chr1:156642464..156642497,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10763 | |EntrezGene=10763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7756 | |HGNC=7756 | ||
|TSSclassifier=strong | |||
|UniProt=P48681 | |UniProt=P48681 | ||
|association_with_transcript=-293bp_to_AB073350_5end | |association_with_transcript=-293bp_to_AB073350_5end | ||
|cluster_id=chr1:156642464..156642497,- | |||
|coexpression_cluster_id=C797 | |||
|description=CAGE_peak_4_at_NES_5end | |description=CAGE_peak_4_at_NES_5end | ||
|id=chr1:156642464..156642497,- | |id=chr1:156642464..156642497,- | ||
|ontology_enrichment_celltype=CL:0002139!5.16e-09!24;CL:0000071!1.75e-08!18;CL:0002546!1.75e-08!18;CL:0000055!6.37e-08!180;CL:0000115!9.94e-08!35;CL:0000133!9.01e-07!59 | |ontology_enrichment_celltype=CL:0002139!5.16e-09!24;CL:0000071!1.75e-08!18;CL:0002546!1.75e-08!18;CL:0000055!6.37e-08!180;CL:0000115!9.94e-08!35;CL:0000133!9.01e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002605;9.93e-13;3!CL:1000413;4.60e-11;9!CL:0000071;5.97e-10;18!CL:0000128;1.55e-09;7!CL:0000126;1.55e-09;7!CL:0000127;1.55e-09;7!CL:0000115;6.27e-08;36!CL:0002322;1.56e-07;5!CL:0002139;3.26e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.64e-13,3;CL:1000413,4.16e-11,9;CL:0000071,3.34e-10,18;CL:0002546,3.34e-10,18;CL:0000128,1.03e-09,7;CL:0000126,1.03e-09,7;CL:0000127,1.03e-09,7;CL:0002453,1.03e-09,7;CL:0002322,1.45e-07,5;CL:0002139,2.14e-07,24;CL:0000115,2.16e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;5.97e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.00e-13!286;UBERON:0000119!7.79e-13!312;UBERON:0000483!1.58e-12!309;UBERON:0004111!4.72e-12!241;UBERON:0002049!2.46e-11!79;UBERON:0007798!2.46e-11!79;UBERON:0004872!1.00e-10!84;UBERON:0001009!1.10e-10!113;UBERON:0004535!3.65e-10!110;UBERON:0000025!4.53e-10!194;UBERON:0000055!5.73e-09!69;UBERON:0001986!1.75e-08!18;UBERON:0004638!1.75e-08!18;UBERON:0004852!1.75e-08!18;UBERON:0001981!1.87e-08!60;UBERON:0007500!1.87e-08!60;UBERON:0004537!1.87e-08!60;UBERON:0006965!1.87e-08!60;UBERON:0000468!2.67e-08!659;UBERON:0000480!4.20e-08!626;UBERON:0000467!6.91e-08!625;UBERON:0000475!8.89e-08!365;UBERON:0003914!9.36e-08!118;UBERON:0004121!5.83e-07!169;UBERON:0001017!7.10e-07!82;UBERON:0000481!8.19e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;4.60e-11;9!UBERON:0004700;4.60e-11;9!UBERON:0001917;4.60e-11;9!UBERON:0004638;5.97e-10;18!UBERON:0001986;5.97e-10;18!UBERON:0004852;5.97e-10;18!UBERON:0000487;5.85e-08;22!UBERON:0006914;6.92e-07;25!UBERON:0007100;9.00e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,4.16e-11,9;UBERON:0004700,4.16e-11,9;UBERON:0001917,4.16e-11,9;UBERON:0004638,3.34e-10,18;UBERON:0001986,3.34e-10,18;UBERON:0004852,3.34e-10,18;UBERON:0007500,5.42e-10,59;UBERON:0001981,5.42e-10,59;UBERON:0004537,5.42e-10,59;UBERON:0006965,5.42e-10,59;UBERON:0004872,1.05e-09,83;UBERON:0000055,2.86e-08,68;UBERON:0000487,3.68e-08,22;UBERON:0001009,3.53e-07,112;UBERON:0006914,4.65e-07,25;UBERON:0002049,7.80e-07,78;UBERON:0007798,7.80e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,1.43117993565528,3.96935832711364,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0.567208902984407,0.665188192387692,0.087834785693126,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,0,2.09749718104953,3.30141650328081,1.8809546988313,0.516833518338658,0,0.66944122552934,0,0.760272105718513,0.976248230192678,0,1.62028389576352,0.446498641420399,0.44905874525234,0.675668882899933,0,1.89853131913626,1.83201743930407,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0.573673241497627,0,0,0,0,0,0.808264032418128,0.326923806226917,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0,0.587172493218824,0,0.140450806702248,0.61246251376468,1.35117749042945,0.206651562351531,0,0.247266929278557,0,0,1.0100166837244,0.750711119231785,0,0,0.919463387397059,0.300476117813194,0.340296549480063,0.89694817844431,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0,0,0.276149695926898,0,1.06502877754984,0,0.508681776931463,0,0,0,1.21973706129595,0.132529768321485,0.464775771478074,1.86589899027667,1.26160425437814,1.09493207722749,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0.927443239800615,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925447434329912,0.300343057843917,0,0.224262168690721,0,0.1466765716419,0,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.179060963239896,0,0,0,0,1.27047312111232,0,0.773288812777695,0,1.91381625495949,0,0,0,0,0,0,0,0.892144943985809,0.315404830067869,0,0,0,0,0,0,1.73767228936166,0,1.71571711905428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0.177561725313127,0.246381468041427,1.55776328755086,0.232420756919918,0.120859449591622,0,0,0.229628896329213,0.728364672026868,1.04899531967539,0.451199612907412,0.0770153371044148,0,0,0,0,1.02056223165909,0.863663664408557,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.462145851343933,0.767518373630648,0.964856007391714,0.214840489736547,1.16013355131383,1.27839941124151,2.58192903375538,0,0,0,0,0,0,0,0,1.06461206063404,0,0.55597265731176,0.143124886741991,0.372158369359667,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0,1.58510321173008,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0.143411352204052,0,0,0.709522128141196,0,0,0.379473173765715,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.562677665642051,0,0,0,1.39473591775749,0,0,2.35217969754956,0,0.933118762985422,0,0,0,0.295930216910801,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.886642856860642,0,0,0,0.0769502585037971,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,1.38674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0.114536596165916,0,0.576219191952599,0,0,0.135904206073614,0.418411385249333,0,0,0,0,0,0,0,1.95497680890578,1.3749625440701,0.717873024576814,0.199679000498991,1.71690419254628,0,0.134366944973453,0,0,0.157566364614447,0.164831716762333,0.404421263125109,0,0,0,0,1.12527203925513,0.412618309791701,0.83088067605837,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0.105600336519406,0,0,2.85878130549347,0.662091970365432,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0.320362237703084,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.488105059607853,0,0,0.554645257684261,0.0620964029413835,0.276697269872462,0,0.606596470166591,0,0.941063278792687,0,0,0.298509605773748,0,0.554805861502613,0.189403005275089,0,0,0.228840068396924,0.604923695052956,0.777186002913902,1.03498604992744,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0,0,0,1.19428766609585,24.0016658797892,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764467467344097,0,0,0,0,0,0,0,0.352675943690684,0.6124909547064,0,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0.2066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| ||
|short_description=p4@NES | |short_description=p4@NES | ||
}} | }} |
Latest revision as of 17:08, 17 September 2015
Short description: | p4@NES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NES_5end |
Coexpression cluster: | C797_mesenchymal_skeletal_Endothelial_Pericytes_Skeletal_Astrocyte_left |
Association with transcript: | -293bp_to_AB073350_5end |
EntrezGene: | NES |
HGNC: | 7756 |
UniProt: | P48681 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.64e-13 | 3 |
endothelial cell of artery | 4.16e-11 | 9 |
blood vessel endothelial cell | 3.34e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.34e-10 | 18 |
oligodendrocyte | 1.03e-09 | 7 |
macroglial cell | 1.03e-09 | 7 |
astrocyte | 1.03e-09 | 7 |
oligodendrocyte precursor cell | 1.03e-09 | 7 |
embryonic stem cell | 1.45e-07 | 5 |
endothelial cell of vascular tree | 2.14e-07 | 24 |
endothelial cell | 2.16e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 4.16e-11 | 9 |
arterial system endothelium | 4.16e-11 | 9 |
endothelium of artery | 4.16e-11 | 9 |
blood vessel endothelium | 3.34e-10 | 18 |
endothelium | 3.34e-10 | 18 |
cardiovascular system endothelium | 3.34e-10 | 18 |
epithelial tube open at both ends | 5.42e-10 | 59 |
blood vessel | 5.42e-10 | 59 |
blood vasculature | 5.42e-10 | 59 |
vascular cord | 5.42e-10 | 59 |
splanchnic layer of lateral plate mesoderm | 1.05e-09 | 83 |
vessel | 2.86e-08 | 68 |
simple squamous epithelium | 3.68e-08 | 22 |
circulatory system | 3.53e-07 | 112 |
squamous epithelium | 4.65e-07 | 25 |
vasculature | 7.80e-07 | 78 |
vascular system | 7.80e-07 | 78 |