FFCP PHASE1:Hg19::chr14:92344000..92344007,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:92344000..92344007,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr14:92344000..92344007,- | |description=CAGE_peak_at_chr14:92344000..92344007,- | ||
|id=chr14:92344000..92344007,- | |id=chr14:92344000..92344007,- | ||
|ontology_enrichment_celltype=CL:0002615!6.87e-17!3;CL:0002580!6.66e-08!3 | |ontology_enrichment_celltype=CL:0002615!6.87e-17!3;CL:0002580!6.66e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002561;7.14e-26;2!CL:0002615;9.45e-18;3!CL:0002559;3.26e-11;5!CL:0000362;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,5.56e-26,2;CL:0002615,1.12e-17,3;CL:0002559,2.94e-11,5;CL:0000362,7.91e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.89e-14!6;UBERON:0002358!1.89e-14!6;UBERON:0003684!1.89e-14!6;UBERON:0001178!1.89e-14!6;UBERON:0009569!2.69e-07!113;UBERON:0004457!2.91e-07!12;UBERON:0000042!2.91e-07!12;UBERON:0000998!7.35e-07!1;UBERON:0006868!7.35e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.38e-99;2!UBERON:0005058;9.38e-99;2!UBERON:0009113;9.38e-99;2!UBERON:0004177;2.22e-40;5!UBERON:0005057;2.22e-40;5!UBERON:0005933;7.14e-26;2!UBERON:0005942;7.14e-26;2!UBERON:0005932;7.14e-26;2!UBERON:0002073;3.26e-11;5!UBERON:0003688;1.44e-09;6!UBERON:0002358;1.44e-09;6!UBERON:0003684;1.44e-09;6!UBERON:0001178;1.44e-09;6!UBERON:0000077;2.06e-08;27!UBERON:0002405;2.06e-08;27!UBERON:0004457;8.37e-07;9!UBERON:0000042;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.00e-50,4;UBERON:0005058,4.00e-50,4;UBERON:0009113,4.00e-50,4;UBERON:0003295,4.00e-50,4;UBERON:0005562,4.00e-50,4;UBERON:0003351,7.07e-34,6;UBERON:0004177,3.16e-29,7;UBERON:0005057,3.16e-29,7;UBERON:0005933,5.56e-26,2;UBERON:0005942,5.56e-26,2;UBERON:0005932,5.56e-26,2;UBERON:0000974,7.73e-21,10;UBERON:0003408,7.73e-21,10;UBERON:0001042,7.73e-21,10;UBERON:0009145,7.73e-21,10;UBERON:0006562,4.69e-19,11;UBERON:0009722,4.69e-19,11;UBERON:0007690,4.69e-19,11;UBERON:0008814,4.31e-12,18;UBERON:0001557,1.63e-11,19;UBERON:0002073,2.94e-11,5;UBERON:0005086,2.94e-11,5;UBERON:0003688,1.57e-09,6;UBERON:0002358,1.57e-09,6;UBERON:0003684,1.57e-09,6;UBERON:0001178,1.57e-09,6;UBERON:0004807,3.78e-08,28;UBERON:0000077,6.67e-08,29 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,3.29403440163631,1.1794195716213,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0.54503513781167,0,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,3.29403440163631,1.1794195716213,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr14:92344000..92344007,- | |short_description=p@chr14:92344000..92344007,- | ||
}} | }} |
Latest revision as of 23:38, 24 July 2015
Short description: | p@chr14:92344000..92344007, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:92344000..92344007, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 5.56e-26 | 2 |
adipocyte of omentum tissue | 1.12e-17 | 3 |
hair follicle cell | 2.94e-11 | 5 |
epidermal cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.00e-50 | 4 |
hemolymphoid system gland | 4.00e-50 | 4 |
thymic region | 4.00e-50 | 4 |
pharyngeal gland | 4.00e-50 | 4 |
thymus primordium | 4.00e-50 | 4 |
pharyngeal epithelium | 7.07e-34 | 6 |
hemopoietic organ | 3.16e-29 | 7 |
immune organ | 3.16e-29 | 7 |
hair root sheath | 5.56e-26 | 2 |
hair outer root sheath | 5.56e-26 | 2 |
bulb of hair follicle | 5.56e-26 | 2 |
neck | 7.73e-21 | 10 |
gland of gut | 7.73e-21 | 10 |
chordate pharynx | 7.73e-21 | 10 |
pharyngeal region of foregut | 7.73e-21 | 10 |
pharynx | 4.69e-19 | 11 |
entire pharyngeal arch endoderm | 4.69e-19 | 11 |
early pharyngeal endoderm | 4.69e-19 | 11 |
pharyngeal arch system | 4.31e-12 | 18 |
upper respiratory tract | 1.63e-11 | 19 |
hair follicle | 2.94e-11 | 5 |
hair follicle placode | 2.94e-11 | 5 |
omentum | 1.57e-09 | 6 |
peritoneum | 1.57e-09 | 6 |
abdominal cavity | 1.57e-09 | 6 |
visceral peritoneum | 1.57e-09 | 6 |
respiratory system epithelium | 3.78e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.67e-08 | 29 |