FFCP PHASE1:Hg19::chr11:26743336..26743349,-: Difference between revisions
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|id=chr11:26743336..26743349,-
|short_description=p3@SLC5A12
|description=CAGE_peak_3_at_SLC5A12_5end
|association_with_transcript=196bp_to_ENST00000280467_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=159963 | |EntrezGene=159963 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28750 | |HGNC=28750 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=196bp_to_ENST00000280467_5end | |||
|cluster_id=chr11:26743336..26743349,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_3_at_SLC5A12_5end | |||
|id=chr11:26743336..26743349,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.56e-26;2!UBERON:0003918;8.54e-21;10!UBERON:0007687;8.54e-21;10!UBERON:0003104;1.17e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.98e-30!3;UBERON:0004054!1.98e-30!3;UBERON:0001301!1.34e-23!1;UBERON:0001000!2.62e-23!1;UBERON:0005352!2.62e-23!1;UBERON:0005904!4.11e-23!4;UBERON:0003135!1.10e-18!11;UBERON:0003101!1.09e-09!22;UBERON:0000079!1.09e-09!22;UBERON:0002113!4.32e-08!27;UBERON:0003918!4.32e-08!27;UBERON:0005095!4.32e-08!27;UBERON:0007687!4.32e-08!27;UBERON:0000489!6.47e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.42e-50;1!UBERON:0006947;8.00e-18;3!UBERON:0004054;8.00e-18;3!UBERON:0005904;1.00e-13;4!UBERON:0002113;2.56e-09;24!UBERON:0011143;2.56e-09;24!UBERON:0000489;6.91e-08;29!UBERON:0006554;1.17e-07;30!UBERON:0001008;1.17e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.42e-50,1;UBERON:0002113,5.19e-18,26;UBERON:0003918,5.19e-18,26;UBERON:0011143,5.19e-18,26;UBERON:0005095,5.19e-18,26;UBERON:0007687,5.19e-18,26;UBERON:0006947,8.00e-18,3;UBERON:0004054,8.00e-18,3;UBERON:0000489,2.87e-15,31;UBERON:0005904,1.00e-13,4;UBERON:0006554,2.17e-10,47;UBERON:0001008,3.42e-10,48;UBERON:0005172,3.71e-09,54;UBERON:0005173,3.71e-09,54;UBERON:0002417,2.51e-08,60;UBERON:0000916,2.51e-08,60;UBERON:0005103,1.59e-07,8;UBERON:0000083,1.59e-07,8;UBERON:0009201,1.59e-07,8;UBERON:0006553,1.59e-07,8;UBERON:0003074,1.59e-07,8;UBERON:0003060,1.59e-07,8;UBERON:0003103,1.92e-07,68;UBERON:0000080,7.91e-07,9;UBERON:0002120,7.91e-07,9;UBERON:0004875,7.91e-07,9;UBERON:0005721,7.91e-07,9;UBERON:0005754,7.91e-07,9;UBERON:0007297,7.91e-07,9 | |||
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|short_description=p3@SLC5A12 | |||
}} | }} |
Latest revision as of 11:31, 17 September 2015
Short description: | p3@SLC5A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC5A12_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 196bp_to_ENST00000280467_5end |
EntrezGene: | SLC5A12 |
HGNC: | 28750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 2.42e-50 | 1 |
kidney | 5.19e-18 | 26 |
kidney mesenchyme | 5.19e-18 | 26 |
upper urinary tract | 5.19e-18 | 26 |
kidney rudiment | 5.19e-18 | 26 |
kidney field | 5.19e-18 | 26 |
male genital duct | 8.00e-18 | 3 |
internal male genitalia | 8.00e-18 | 3 |
cavitated compound organ | 2.87e-15 | 31 |
duct of male reproductive system | 1.00e-13 | 4 |
urinary system structure | 2.17e-10 | 47 |
renal system | 3.42e-10 | 48 |
abdomen element | 3.71e-09 | 54 |
abdominal segment element | 3.71e-09 | 54 |
abdominal segment of trunk | 2.51e-08 | 60 |
abdomen | 2.51e-08 | 60 |
mesonephric epithelium | 1.59e-07 | 8 |
mesonephric tubule | 1.59e-07 | 8 |
nephric duct | 1.59e-07 | 8 |
renal duct | 1.59e-07 | 8 |
mesonephric duct | 1.59e-07 | 8 |
pronephric duct | 1.59e-07 | 8 |
compound organ | 1.92e-07 | 68 |
mesonephros | 7.91e-07 | 9 |
pronephros | 7.91e-07 | 9 |
nephrogenic cord | 7.91e-07 | 9 |
pronephric mesoderm | 7.91e-07 | 9 |
rostral part of nephrogenic cord | 7.91e-07 | 9 |
presumptive pronephric mesoderm | 7.91e-07 | 9 |