FFCP PHASE1:Hg19::chr11:2018389..2018396,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:2018389..2018396,-
|short_description=p26@H19
|description=CAGE_peak_26_at_H19_5end
|association_with_transcript=50bp_to_ENST00000411861_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_ENST00000411861_5end | |||
|cluster_id=chr11:2018389..2018396,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_26_at_H19_5end | |||
|id=chr11:2018389..2018396,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.84e-20;19!CL:0002577;7.57e-10;3!CL:0002541;1.13e-09;3!CL:0000515;2.38e-08;3!CL:0002575;4.98e-07;2!CL:0002536;5.67e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.90e-20,19;CL:0002577,7.70e-10,3;CL:0002541,1.18e-09,3;CL:0002575,4.99e-07,2;CL:0002536,5.60e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.51e-09;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!9.70e-15!14;UBERON:0000158!9.70e-15!14;UBERON:0001557!3.12e-13!19;UBERON:0001737!1.51e-12!9;UBERON:0000478!1.65e-11!24;UBERON:0003124!5.98e-11!7;UBERON:0004923!7.37e-10!57;UBERON:0004119!1.04e-08!169;UBERON:0000925!1.04e-08!169;UBERON:0006595!1.04e-08!169;UBERON:0003104!4.58e-08!238;UBERON:0009142!4.58e-08!238;UBERON:0004921!8.86e-08!129;UBERON:0004185!8.86e-08!129;UBERON:0001041!1.21e-07!98;UBERON:0001007!1.27e-07!155;UBERON:0001555!1.27e-07!155;UBERON:0007026!1.27e-07!155;UBERON:0000077!1.28e-07!130;UBERON:0003688!2.46e-07!6;UBERON:0002358!2.46e-07!6;UBERON:0003684!2.46e-07!6;UBERON:0001178!2.46e-07!6;UBERON:0001987!6.82e-07!4;UBERON:0004340!6.82e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.49e-23;9!UBERON:0001557;4.49e-23;9!UBERON:0000478;3.94e-21;24!UBERON:0005631;2.64e-18;10!UBERON:0000158;2.64e-18;10!UBERON:0001134;6.29e-18;16!UBERON:0002036;6.29e-18;16!UBERON:0001987;6.02e-12;4!UBERON:0000305;8.09e-11;7!UBERON:0003124;1.13e-09;3!UBERON:0000920;1.13e-09;3!UBERON:0001723;5.70e-09;3!UBERON:0001033;5.70e-09;3!UBERON:0002385;5.37e-08;31!UBERON:0001015;5.37e-08;31!UBERON:0000383;5.37e-08;31!UBERON:0000072;3.45e-07;37!UBERON:0005406;7.03e-07;2!UBERON:0005090;7.23e-07;2!UBERON:0001630;7.23e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.37e-28,14;UBERON:0000158,2.37e-28,14;UBERON:0001737,4.29e-23,9;UBERON:0000478,3.67e-21,24;UBERON:0003124,5.93e-20,7;UBERON:0001557,3.51e-18,19;UBERON:0001987,5.11e-12,4;UBERON:0004340,5.11e-12,4;UBERON:0000305,8.03e-11,7;UBERON:0000920,1.18e-09,3;UBERON:0004871,2.09e-09,8;UBERON:0000072,3.37e-09,47;UBERON:0001723,4.41e-09,3;UBERON:0001033,4.41e-09,3;UBERON:0010056,4.41e-09,3;UBERON:0004923,4.30e-08,66;UBERON:0000065,1.44e-07,54;UBERON:0005406,6.85e-07,2;UBERON:0005090,7.46e-07,2;UBERON:0001630,7.46e-07,2 | |||
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| ||
|short_description=p26@H19 | |||
}} | }} |
Latest revision as of 06:48, 17 September 2015
Short description: | p26@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 50bp_to_ENST00000411861_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.90e-20 | 19 |
placental epithelial cell | 7.70e-10 | 3 |
chorionic membrane mesenchymal stem cell | 1.18e-09 | 3 |
central nervous system pericyte | 4.99e-07 | 2 |
amniotic epithelial cell | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.37e-28 | 14 |
membranous layer | 2.37e-28 | 14 |
larynx | 4.29e-23 | 9 |
extraembryonic structure | 3.67e-21 | 24 |
chorion | 5.93e-20 | 7 |
upper respiratory tract | 3.51e-18 | 19 |
placenta | 5.11e-12 | 4 |
allantois | 5.11e-12 | 4 |
amnion | 8.03e-11 | 7 |
egg chorion | 1.18e-09 | 3 |
somatic layer of lateral plate mesoderm | 2.09e-09 | 8 |
segment of respiratory tract | 3.37e-09 | 47 |
tongue | 4.41e-09 | 3 |
gustatory system | 4.41e-09 | 3 |
future tongue | 4.41e-09 | 3 |
organ component layer | 4.30e-08 | 66 |
respiratory tract | 1.44e-07 | 54 |
perirenal fat | 6.85e-07 | 2 |
muscle structure | 7.46e-07 | 2 |
muscle organ | 7.46e-07 | 2 |