FFCP PHASE1:Hg19::chr19:42656683..42656689,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000559786,uc002ost.1_5end | |association_with_transcript=-31bp_to_ENST00000559786,uc002ost.1_5end | ||
|cluster_id=chr19:42656683..42656689,+ | |||
|coexpression_cluster_id=C126 | |||
|description=CAGE_peak_1_at_ENST00000559786_5end,CAGE_peak_1_at_uc002ost.1_5end | |description=CAGE_peak_1_at_ENST00000559786_5end,CAGE_peak_1_at_uc002ost.1_5end | ||
|id=chr19:42656683..42656689,+ | |id=chr19:42656683..42656689,+ | ||
|ontology_enrichment_celltype=CL:0002553!8.68e-10!1;CL:0000167!9.44e-10!1;CL:0000164!9.44e-10!1;CL:0000502!9.44e-10!1;CL:0000172!9.44e-10!1;CL:0000173!9.44e-10!1;CL:0002351!9.44e-10!1;CL:0002322!1.95e-07!5 | |ontology_enrichment_celltype=CL:0002553!8.68e-10!1;CL:0000167!9.44e-10!1;CL:0000164!9.44e-10!1;CL:0000502!9.44e-10!1;CL:0000172!9.44e-10!1;CL:0000173!9.44e-10!1;CL:0002351!9.44e-10!1;CL:0002322!1.95e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002553;9.99e-30;1!CL:0000167;1.33e-29;1!CL:0000164;1.33e-29;1!CL:0000502;1.33e-29;1!CL:0000172;1.33e-29;1!CL:0000173;1.33e-29;1!CL:0002322;5.87e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,9.99e-30,1;CL:0000167,1.33e-29,1;CL:0000164,1.33e-29,1;CL:0000502,1.33e-29,1;CL:0000172,1.33e-29,1;CL:0000173,1.33e-29,1;CL:0002351,1.33e-29,1;CL:0002322,6.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002351;1.33e-29;1!UBERON:0006242;2.05e-29;1!UBERON:0005425;3.64e-29;1!UBERON:0003056;1.14e-10;3 | |||
|ontology_enrichment_disease=DOID:4430!9.44e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.33e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.33e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0003076!6.37e-25!15;UBERON:0003057!6.37e-25!15;UBERON:0002298!3.57e-24!8;UBERON:0000988!8.27e-24!3;UBERON:0004732!2.63e-21!13;UBERON:0002148!1.33e-16!2;UBERON:0009662!1.33e-16!2;UBERON:0004733!4.24e-16!12;UBERON:0002028!4.24e-16!12;UBERON:0007277!4.24e-16!12;UBERON:0002240!8.36e-12!3;UBERON:0001896!1.97e-11!3;UBERON:0005290!1.97e-11!3;UBERON:0010096!1.97e-11!3;UBERON:0006331!2.19e-11!3;UBERON:0001049!9.51e-10!57;UBERON:0005068!9.51e-10!57;UBERON:0006241!9.51e-10!57;UBERON:0007135!9.51e-10!57;UBERON:0000073!1.11e-09!94;UBERON:0001016!1.11e-09!94;UBERON:0000941!1.21e-09!1;UBERON:0004904!1.21e-09!1;UBERON:0002464!1.21e-09!1;UBERON:0001021!1.21e-09!1;UBERON:0001785!1.21e-09!1;UBERON:0003075!3.87e-09!86;UBERON:0007284!3.87e-09!86;UBERON:0005743!5.16e-09!86;UBERON:0002346!1.17e-08!90;UBERON:0002680!2.56e-08!9;UBERON:0001895!2.56e-08!9;UBERON:0010092!2.56e-08!9;UBERON:0001017!7.70e-08!82;UBERON:0007023!8.01e-08!115;UBERON:0005174!2.01e-07!5;UBERON:0001137!2.01e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.64e-29;1!UBERON:0001785;3.64e-29;1!UBERON:0002464;3.64e-29;1!UBERON:0004904;3.64e-29;1!UBERON:0001021;3.64e-29;1!UBERON:0003714;2.55e-15;2!UBERON:0005162;2.55e-15;2!UBERON:0000122;2.55e-15;2!UBERON:0002110;9.43e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.16e-29,1;UBERON:0001785,3.16e-29,1;UBERON:0002464,3.16e-29,1;UBERON:0004904,3.16e-29,1;UBERON:0001021,3.16e-29,1;UBERON:0003902,3.16e-29,1;UBERON:0005425,3.16e-29,1;UBERON:0003714,2.37e-15,2;UBERON:0005162,2.37e-15,2;UBERON:0000122,2.37e-15,2;UBERON:0002110,8.99e-11,3;UBERON:0006242,8.99e-11,3;UBERON:0001781,2.43e-08,4 | |||
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|short_description=p1@ENST00000559786,p1@uc002ost.1 | |short_description=p1@ENST00000559786,p1@uc002ost.1 | ||
}} | }} |
Latest revision as of 08:49, 26 July 2015
Short description: | p1@ENST00000559786, p1@uc002ost.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000559786_5end, CAGE_peak_1_at_uc002ost.1_5end |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | -31bp_to_ENST00000559786, uc002ost.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 9.99e-30 | 1 |
peptide hormone secreting cell | 1.33e-29 | 1 |
enteroendocrine cell | 1.33e-29 | 1 |
type D enteroendocrine cell | 1.33e-29 | 1 |
somatostatin secreting cell | 1.33e-29 | 1 |
pancreatic D cell | 1.33e-29 | 1 |
progenitor cell of endocrine pancreas | 1.33e-29 | 1 |
embryonic stem cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.16e-29 | 1 |
cranial nerve | 3.16e-29 | 1 |
nerve trunk | 3.16e-29 | 1 |
nerve connecting eye with brain | 3.16e-29 | 1 |
nerve | 3.16e-29 | 1 |
retinal neural layer | 3.16e-29 | 1 |
presumptive neural retina | 3.16e-29 | 1 |
neural tissue | 2.37e-15 | 2 |
multi cell component structure | 2.37e-15 | 2 |
neuron projection bundle | 2.37e-15 | 2 |
gallbladder | 8.99e-11 | 3 |
gall bladder primordium | 8.99e-11 | 3 |
layer of retina | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.33e-29 | 1 |