FFCP PHASE1:Hg19::chr14:106174454..106174459,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:106174454..106174459,+ | |||
|coexpression_cluster_id=C394 | |||
|description=CAGE_peak_at_chr14:106174454..106174459,+ | |description=CAGE_peak_at_chr14:106174454..106174459,+ | ||
|id=chr14:106174454..106174459,+ | |id=chr14:106174454..106174459,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;5.81e-12;86 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.75e-32!115;UBERON:0002171!4.57e-08!1;UBERON:0006518!4.57e-08!1;UBERON:0008949!4.57e-08!1;UBERON:0000101!4.57e-08!1;UBERON:0002167!4.57e-08!1;UBERON:0002372!5.58e-08!1;UBERON:0001961!5.58e-08!1;UBERON:0001744!5.58e-08!1;UBERON:0001735!5.58e-08!1;UBERON:0001831!9.44e-08!1;UBERON:0001567!9.44e-08!1;UBERON:0008801!9.44e-08!1;UBERON:0002363!1.91e-07!1;UBERON:0007647!1.91e-07!1;UBERON:0010115!1.91e-07!1;UBERON:0004921!6.45e-07!129;UBERON:0004185!6.45e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.18e-34;1!UBERON:0006518;2.18e-34;1!UBERON:0008949;2.18e-34;1!UBERON:0000101;2.18e-34;1!UBERON:0002167;2.18e-34;1!UBERON:0002372;5.97e-34;1!UBERON:0001961;5.97e-34;1!UBERON:0001744;5.97e-34;1!UBERON:0001042;5.97e-34;1!UBERON:0001735;5.97e-34;1!UBERON:0006562;9.86e-18;2!UBERON:0000160;3.04e-17;17!UBERON:0001155;1.31e-15;9!UBERON:0004921;2.14e-14;33!UBERON:0005409;1.12e-13;22!UBERON:0000059;5.76e-13;11!UBERON:0002106;2.74e-12;3!UBERON:0002108;5.54e-08;4!UBERON:0004177;6.78e-08;5!UBERON:0005057;6.78e-08;5!UBERON:0001555;7.67e-07;54!UBERON:0001007;7.82e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.58e-34,1;UBERON:0006518,2.58e-34,1;UBERON:0008949,2.58e-34,1;UBERON:0000101,2.58e-34,1;UBERON:0002167,2.58e-34,1;UBERON:0002372,7.06e-34,1;UBERON:0001961,7.06e-34,1;UBERON:0001744,7.06e-34,1;UBERON:0001735,7.06e-34,1;UBERON:0005409,7.73e-21,25;UBERON:0000160,2.64e-17,17;UBERON:0001155,1.13e-15,9;UBERON:0000059,5.10e-13,11;UBERON:0002106,3.24e-12,3;UBERON:0004854,3.24e-12,3;UBERON:0009034,3.24e-12,3;UBERON:0002095,3.24e-12,3;UBERON:0004782,3.24e-12,3;UBERON:0003281,3.24e-12,3;UBERON:0009664,3.24e-12,3;UBERON:0002296,3.24e-12,3;UBERON:0005602,3.24e-12,3;UBERON:0001179,3.24e-12,3;UBERON:0006293,3.24e-12,3;UBERON:0007023,7.60e-11,114;UBERON:0004921,2.09e-10,118;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0002108,5.35e-08,4;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160 | |||
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|short_description=p@chr14:106174454..106174459,+ | |short_description=p@chr14:106174454..106174459,+ | ||
}} | }} |
Latest revision as of 18:38, 24 July 2015
Short description: | p@chr14:106174454..106174459, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106174454..106174459, + |
Coexpression cluster: | C394_submaxillary_small_colon_throat_appendix_tonsil_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.58e-34 | 1 |
right lung lobe | 2.58e-34 | 1 |
lower lobe of lung | 2.58e-34 | 1 |
lobe of lung | 2.58e-34 | 1 |
right lung | 2.58e-34 | 1 |
tonsil | 7.06e-34 | 1 |
mucosa-associated lymphoid tissue | 7.06e-34 | 1 |
lymphoid tissue | 7.06e-34 | 1 |
tonsillar ring | 7.06e-34 | 1 |
gastrointestinal system | 7.73e-21 | 25 |
intestine | 2.64e-17 | 17 |
colon | 1.13e-15 | 9 |
large intestine | 5.10e-13 | 11 |
spleen | 3.24e-12 | 3 |
gastrointestinal system mesentery | 3.24e-12 | 3 |
stomach region | 3.24e-12 | 3 |
mesentery | 3.24e-12 | 3 |
gastrointestinal system serosa | 3.24e-12 | 3 |
mesentery of stomach | 3.24e-12 | 3 |
gut mesentery | 3.24e-12 | 3 |
dorsal mesentery | 3.24e-12 | 3 |
dorsal mesogastrium | 3.24e-12 | 3 |
peritoneal cavity | 3.24e-12 | 3 |
spleen primordium | 3.24e-12 | 3 |
adult organism | 7.60e-11 | 114 |
subdivision of digestive tract | 2.09e-10 | 118 |
digestive system | 1.51e-08 | 145 |
digestive tract | 1.51e-08 | 145 |
primitive gut | 1.51e-08 | 145 |
small intestine | 5.35e-08 | 4 |
endoderm-derived structure | 8.84e-08 | 160 |
endoderm | 8.84e-08 | 160 |
presumptive endoderm | 8.84e-08 | 160 |