FFCP PHASE1:Hg19::chr14:102290205..102290228,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5527 | |EntrezGene=5527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9311 | |HGNC=9311 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000553842_5end | |association_with_transcript=0bp_to_ENST00000553842_5end | ||
|cluster_id=chr14:102290205..102290228,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_9_at_PPP2R5C_5end | |description=CAGE_peak_9_at_PPP2R5C_5end | ||
|id=chr14:102290205..102290228,+ | |id=chr14:102290205..102290228,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.60e-49!140;CL:0002087!1.09e-41!119;CL:0000838!4.07e-39!52;CL:0002031!2.33e-38!124;CL:0000542!4.51e-38!53;CL:0000051!4.51e-38!53;CL:0000037!1.96e-35!172;CL:0000566!1.96e-35!172;CL:0000988!2.09e-35!182;CL:0002032!3.60e-31!165;CL:0000837!3.60e-31!165;CL:0000791!1.13e-24!18;CL:0000789!1.13e-24!18;CL:0002420!1.13e-24!18;CL:0002419!1.13e-24!18;CL:0000790!1.13e-24!18;CL:0000084!2.39e-23!25;CL:0000827!2.39e-23!25;CL:0000625!1.27e-15!11;CL:0000945!1.35e-13!24;CL:0000826!1.35e-13!24;CL:0002057!3.94e-11!42;CL:0000860!6.40e-10!45;CL:0000624!1.25e-09!6;CL:0002009!1.24e-08!65;CL:0000766!1.56e-08!76;CL:0000236!2.12e-08!14;CL:0000080!2.74e-08!6;CL:0000557!6.32e-08!71;CL:0002194!1.22e-07!63;CL:0000576!1.22e-07!63;CL:0000040!1.22e-07!63;CL:0000559!1.22e-07!63;CL:0000839!8.41e-07!70 | |ontology_enrichment_celltype=CL:0000738!8.60e-49!140;CL:0002087!1.09e-41!119;CL:0000838!4.07e-39!52;CL:0002031!2.33e-38!124;CL:0000542!4.51e-38!53;CL:0000051!4.51e-38!53;CL:0000037!1.96e-35!172;CL:0000566!1.96e-35!172;CL:0000988!2.09e-35!182;CL:0002032!3.60e-31!165;CL:0000837!3.60e-31!165;CL:0000791!1.13e-24!18;CL:0000789!1.13e-24!18;CL:0002420!1.13e-24!18;CL:0002419!1.13e-24!18;CL:0000790!1.13e-24!18;CL:0000084!2.39e-23!25;CL:0000827!2.39e-23!25;CL:0000625!1.27e-15!11;CL:0000945!1.35e-13!24;CL:0000826!1.35e-13!24;CL:0002057!3.94e-11!42;CL:0000860!6.40e-10!45;CL:0000624!1.25e-09!6;CL:0002009!1.24e-08!65;CL:0000766!1.56e-08!76;CL:0000236!2.12e-08!14;CL:0000080!2.74e-08!6;CL:0000557!6.32e-08!71;CL:0002194!1.22e-07!63;CL:0000576!1.22e-07!63;CL:0000040!1.22e-07!63;CL:0000559!1.22e-07!63;CL:0000839!8.41e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.01e-45;18!CL:0000789;6.01e-45;18!CL:0002419;6.01e-45;18!CL:0000084;2.12e-34;25!CL:0000625;6.68e-28;11!CL:0000542;3.08e-18;53!CL:0000624;1.10e-16;6!CL:0000898;1.82e-09;3!CL:0000623;6.99e-09;3!CL:0000226;3.42e-08;3!CL:0000842;3.42e-08;3!CL:0002087;4.18e-08;104!CL:0000767;5.97e-08;3!CL:0000815;8.15e-07;2!CL:0000792;8.15e-07;2!CL:0002677;8.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.49e-45,18;CL:0000789,5.49e-45,18;CL:0002420,5.49e-45,18;CL:0002419,5.49e-45,18;CL:0000790,5.49e-45,18;CL:0000084,1.99e-34,25;CL:0000827,1.99e-34,25;CL:0000838,4.15e-34,52;CL:0000542,2.65e-33,53;CL:0000051,2.65e-33,53;CL:0000625,6.27e-28,11;CL:0000738,2.84e-21,136;CL:0002087,5.22e-20,115;CL:0000988,1.11e-16,177;CL:0000624,1.13e-16,6;CL:0000037,3.75e-15,168;CL:0002031,4.34e-15,120;CL:0002032,3.03e-13,161;CL:0000837,3.03e-13,161;CL:0000898,1.89e-09,3;CL:0000623,6.99e-09,3;CL:0000825,6.99e-09,3;CL:0000226,2.94e-08,3;CL:0000842,2.94e-08,3;CL:0000767,5.09e-08,3;CL:0000815,8.49e-07,2;CL:0000792,8.49e-07,2;CL:0002677,8.49e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;6.01e-45;18!CL:0000051;3.08e-18;53 | |||
|ontology_enrichment_disease=DOID:0060058!7.24e-07!10 | |ontology_enrichment_disease=DOID:0060058!7.24e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.71e-20!102;UBERON:0003061!3.71e-20!102;UBERON:0002193!8.55e-19!112;UBERON:0000178!1.48e-18!15;UBERON:0000179!1.48e-18!15;UBERON:0000463!1.48e-18!15;UBERON:0004177!6.54e-09!7;UBERON:0007023!2.30e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!3.71e-20!102;UBERON:0003061!3.71e-20!102;UBERON:0002193!8.55e-19!112;UBERON:0000178!1.48e-18!15;UBERON:0000179!1.48e-18!15;UBERON:0000463!1.48e-18!15;UBERON:0004177!6.54e-09!7;UBERON:0007023!2.30e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.17e-33;15!UBERON:0000179;2.17e-33;15!UBERON:0000463;2.17e-33;15!UBERON:0002390;1.60e-20;32!UBERON:0002193;5.32e-12;42!UBERON:0004177;1.61e-07;5!UBERON:0005057;1.61e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.88e-33,15;UBERON:0000179,1.88e-33,15;UBERON:0000463,1.88e-33,15;UBERON:0004177,8.93e-12,7;UBERON:0005057,8.93e-12,7;UBERON:0002370,3.05e-10,4;UBERON:0005058,3.05e-10,4;UBERON:0009113,3.05e-10,4;UBERON:0003295,3.05e-10,4;UBERON:0005562,3.05e-10,4;UBERON:0002390,1.40e-09,98;UBERON:0003061,1.40e-09,98;UBERON:0002193,5.52e-09,108;UBERON:0003351,8.04e-07,6 | |||
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|short_description=p9@PPP2R5C | |short_description=p9@PPP2R5C | ||
}} | }} |
Latest revision as of 12:51, 18 September 2015
Short description: | p9@PPP2R5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PPP2R5C_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000553842_5end |
EntrezGene: | PPP2R5C |
HGNC: | 9311 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.49e-45 | 18 |
alpha-beta T cell | 5.49e-45 | 18 |
immature T cell | 5.49e-45 | 18 |
mature T cell | 5.49e-45 | 18 |
immature alpha-beta T cell | 5.49e-45 | 18 |
T cell | 1.99e-34 | 25 |
pro-T cell | 1.99e-34 | 25 |
lymphoid lineage restricted progenitor cell | 4.15e-34 | 52 |
lymphocyte | 2.65e-33 | 53 |
common lymphoid progenitor | 2.65e-33 | 53 |
CD8-positive, alpha-beta T cell | 6.27e-28 | 11 |
leukocyte | 2.84e-21 | 136 |
nongranular leukocyte | 5.22e-20 | 115 |
hematopoietic cell | 1.11e-16 | 177 |
CD4-positive, alpha-beta T cell | 1.13e-16 | 6 |
hematopoietic stem cell | 3.75e-15 | 168 |
hematopoietic lineage restricted progenitor cell | 4.34e-15 | 120 |
hematopoietic oligopotent progenitor cell | 3.03e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.03e-13 | 161 |
naive T cell | 1.89e-09 | 3 |
natural killer cell | 6.99e-09 | 3 |
pro-NK cell | 6.99e-09 | 3 |
single nucleate cell | 2.94e-08 | 3 |
mononuclear cell | 2.94e-08 | 3 |
basophil | 5.09e-08 | 3 |
regulatory T cell | 8.49e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.49e-07 | 2 |
naive regulatory T cell | 8.49e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.88e-33 | 15 |
haemolymphatic fluid | 1.88e-33 | 15 |
organism substance | 1.88e-33 | 15 |
hemopoietic organ | 8.93e-12 | 7 |
immune organ | 8.93e-12 | 7 |
thymus | 3.05e-10 | 4 |
hemolymphoid system gland | 3.05e-10 | 4 |
thymic region | 3.05e-10 | 4 |
pharyngeal gland | 3.05e-10 | 4 |
thymus primordium | 3.05e-10 | 4 |
hematopoietic system | 1.40e-09 | 98 |
blood island | 1.40e-09 | 98 |
hemolymphoid system | 5.52e-09 | 108 |
pharyngeal epithelium | 8.04e-07 | 6 |