FFCP PHASE1:Hg19::chr19:20607694..20607718,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=664701 | |EntrezGene=664701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33875 | |HGNC=33875 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=43bp_to_ENST00000502675,uc002now.1,uc002noz.2,uc010ecl.1,uc010ecm.2,uc010xrf.1_5end | |association_with_transcript=43bp_to_ENST00000502675,uc002now.1,uc002noz.2,uc010ecl.1,uc010ecm.2,uc010xrf.1_5end | ||
|cluster_id=chr19:20607694..20607718,- | |||
|coexpression_cluster_id=C1240 | |||
|description=CAGE_peak_3_at_ZNF826P_5end | |description=CAGE_peak_3_at_ZNF826P_5end | ||
|id=chr19:20607694..20607718,- | |id=chr19:20607694..20607718,- | ||
|ontology_enrichment_celltype=CL:0002319!9.34e-08!25 | |ontology_enrichment_celltype=CL:0002319!9.34e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;5.42e-10;25!CL:0002322;3.11e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.45e-10,25;CL:0002322,3.17e-09,5;CL:0000133,1.65e-07,59;CL:0000047,1.86e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.51e-21!86;UBERON:0000073!2.45e-21!94;UBERON:0001016!2.45e-21!94;UBERON:0001017!5.10e-20!82;UBERON:0002346!9.47e-19!90;UBERON:0003075!2.28e-18!86;UBERON:0007284!2.28e-18!86;UBERON:0001049!2.95e-17!57;UBERON:0005068!2.95e-17!57;UBERON:0006241!2.95e-17!57;UBERON:0007135!2.95e-17!57;UBERON:0002616!1.60e-15!59;UBERON:0000924!2.19e-15!173;UBERON:0006601!2.19e-15!173;UBERON:0000955!4.79e-15!69;UBERON:0006238!4.79e-15!69;UBERON:0004121!6.60e-15!169;UBERON:0003056!1.08e-13!61;UBERON:0003080!9.13e-12!42;UBERON:0002780!1.71e-11!41;UBERON:0001890!1.71e-11!41;UBERON:0006240!1.71e-11!41;UBERON:0000153!2.39e-11!129;UBERON:0007811!2.39e-11!129;UBERON:0000033!2.41e-10!123;UBERON:0002020!7.57e-09!34;UBERON:0003528!7.57e-09!34;UBERON:0001893!1.17e-08!34;UBERON:0002791!1.87e-08!33;UBERON:0001869!1.46e-07!32;UBERON:0007023!2.51e-07!115;UBERON:0003076!6.18e-07!15;UBERON:0003057!6.18e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;1.08e-08;13!UBERON:0002298;5.72e-08;6!UBERON:0004733;9.22e-08;12!UBERON:0002028;9.22e-08;12!UBERON:0000473;1.90e-07;8!UBERON:0002784;3.14e-07;4!UBERON:0000073;4.61e-07;53!UBERON:0002616;4.61e-07;53!UBERON:0003135;6.07e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.29e-16,81;UBERON:0001016,7.97e-15,89;UBERON:0010371,1.65e-13,104;UBERON:0003075,1.92e-13,82;UBERON:0007284,1.92e-13,82;UBERON:0002346,3.69e-13,86;UBERON:0001049,2.29e-12,56;UBERON:0005068,2.29e-12,56;UBERON:0006241,2.29e-12,56;UBERON:0007135,2.29e-12,56;UBERON:0010314,8.43e-12,132;UBERON:0003076,3.32e-11,15;UBERON:0003057,3.32e-11,15;UBERON:0004121,5.16e-11,171;UBERON:0000924,5.16e-11,171;UBERON:0006601,5.16e-11,171;UBERON:0000955,1.27e-10,68;UBERON:0006238,1.27e-10,68;UBERON:0000073,4.22e-10,53;UBERON:0002616,4.22e-10,53;UBERON:0004732,6.01e-09,13;UBERON:0002298,3.49e-08,6;UBERON:0003056,4.79e-08,61;UBERON:0004733,5.72e-08,12;UBERON:0002028,5.72e-08,12;UBERON:0007277,5.72e-08,12;UBERON:0000473,1.76e-07,8;UBERON:0002784,2.24e-07,4;UBERON:0003135,5.64e-07,11 | |||
|phase1_expression=0.908391896352783,0.856402095563933,0.422863212287913,0,0.446961094427288,0,0,0,0,0.737201809504527,0.697801167972428,2.40285509343189,0.791300934685361,0,0,0,0,0,0,1.35433163884467,0.408001382488506,0,1.43117993565528,1.09499540058307,1.75759695432724,0.382067028739756,0.164201178899891,0.314843125254717,0.786728553697808,0,0,0,0.90361775633475,0.739508020333575,1.08454080812422,2.27470771979874,0.880801318004542,0,0,0.217010870715852,0.671746422719773,0,0.515151135268373,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,1.60158394814405,1.14950487990897,0.661044872784862,1.90810750907073,1.1384259382189,0.587237189370939,0,0,0,1.58030450865046,0.590129310341499,0.393010762749165,0.411202997999018,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0.664601683750863,2.43723477388514,0.25618263945135,0.260118695119756,0.328875809207352,0.276350017785848,0.289803085735052,0.444859689486181,0.267540828089713,0,0.226618685395132,0.383220493601921,1.37450978193052,0.506039384039006,0.318565414324097,0,0.950452044448374,0.451725357233318,0,0,0.710331756132051,0.821127996921047,0.80642697289893,0.802320587350522,0.289648807765598,0,2.01210257911091,0.255725123687061,0,0,0,0,0,1.41802225746102,1.10864698731282,1.22968699970376,2.75056058545197,0,0.370784442784429,0.324547393654683,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.892997282840798,0.22452937262617,1.23872628531654,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.933633106199299,0.134710672069688,1.47115712802113,0.302714855289863,0,0.70296429550139,0.312160076830321,0,0.298897361103602,1.40921398372518,1.29498355494505,1.82586048712923,1.02077085627447,0.368502951935304,0,0,0,0.910161361938026,0,0.841680569770331,0.750711119231785,0.277064115484183,0.877955241761676,0,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0,0.600182192168805,0.412210116953756,0.515281080091258,0,0.337552664482532,0.389748020644795,0.504867548488229,0.276149695926898,0,0.355009592516614,0.705264687593482,0.508681776931463,0,0.818238361772504,0,3.29329006549908,5.03613119621644,5.11253348625881,2.48786532036889,7.0649838245176,11.3142981313507,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,2.20731549707325,0,1.71567810298526,1.31700342490351,0,0.703702806881416,0,0,0,1.44331342025273,0.695582429850461,0.821860859650752,0,0,0,0,0,0,0,0.297262324577456,0,0.335964256397719,0.283550194484773,0.626909658919938,1.74380363108377,0,0,0,0,0.144119953416961,0.37872730027914,0,0,0,0,0.102827492703324,0,0.285826432630578,1.34557301214433,0.87192013766656,1.6134422880609,0,0,0,0,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0.542621605391443,0,1.30294473717494,0,0,0,0,0.299918973546171,0,1.50677127429638,0,0,0,0,1.15825045334063,0,0.716243852959582,1.00876629594175,0.394061520403854,0.431255149719035,0.385029108839245,2.03275699377971,6.50699269288109,0.773288812777695,1.34013012267479,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0.184369168541703,0.521301686808497,0,0,0.206768026122887,0,0,0.909382714338778,0,1.5119514666484,0,0,0,0.256278298511402,0.511707249066704,0.482561763430822,0,1.07946785661859,0.532685175939381,0.492762936082855,0,1.16210378459959,0,0,0,0.574072240823034,0.182091168006717,0,0.902399225814824,0.847168708148562,0,0,0.211103257785751,1.13733384070897,0.340187410553031,0.647747748306418,0,0.270946437543853,0.501689773854853,1.52925763827023,0,0.671624264166535,0,0,1.53870075069834,0.656029291399411,0.650756789328606,0.206082023295445,0,0,2.29706215198469,0,0,0,1.69453478826109,1.99554777143968,2.06754858726796,0.537101224341368,0.290033387828457,1.44885266607372,0.0890320356467374,0.661139661443912,0,1.02090169995667,0.30347334256665,0,0,0,0,0.532306030317022,0,0,0,1.116475108079,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,1.07923474549989,0.274537029736055,1.29593642580255,0,0,0.421258456238981,0.975267478179181,0.243713489631284,0,0,0,0,0,0,0,1.15755106853338,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0.329294892959902,0.379473173765715,0,0.48111056362756,0,1.08890984861323,0.0941438007767792,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,1.13826949357463,0,2.19537308576098,1.1490322207942,0.211673582723883,0.324621940274555,2.80797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,1.89318974933188,0,2.81974010175699,0,0,1.33496573924465,0,0,0,0.890894042497916,0,0.994147647766298,0.422008249231538,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,2.22273980289274,0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| ||
|short_description=p3@ZNF826P | |short_description=p3@ZNF826P | ||
}} | }} |
Latest revision as of 21:29, 16 September 2015
Short description: | p3@ZNF826P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF826P_5end |
Coexpression cluster: | C1240_testicular_iPS_HES3GFP_H9_teratocarcinoma_non_gall |
Association with transcript: | 43bp_to_ENST00000502675, uc002now.1, uc002noz.2, uc010ecl.1, uc010ecm.2, uc010xrf.1_5end |
EntrezGene: | ZNF826P |
HGNC: | 33875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.45e-10 | 25 |
embryonic stem cell | 3.17e-09 | 5 |
neurectodermal cell | 1.65e-07 | 59 |
neuronal stem cell | 1.86e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.29e-16 | 81 |
nervous system | 7.97e-15 | 89 |
ecto-epithelium | 1.65e-13 | 104 |
neural plate | 1.92e-13 | 82 |
presumptive neural plate | 1.92e-13 | 82 |
neurectoderm | 3.69e-13 | 86 |
neural tube | 2.29e-12 | 56 |
neural rod | 2.29e-12 | 56 |
future spinal cord | 2.29e-12 | 56 |
neural keel | 2.29e-12 | 56 |
structure with developmental contribution from neural crest | 8.43e-12 | 132 |
posterior neural tube | 3.32e-11 | 15 |
chordal neural plate | 3.32e-11 | 15 |
ectoderm-derived structure | 5.16e-11 | 171 |
ectoderm | 5.16e-11 | 171 |
presumptive ectoderm | 5.16e-11 | 171 |
brain | 1.27e-10 | 68 |
future brain | 1.27e-10 | 68 |
regional part of nervous system | 4.22e-10 | 53 |
regional part of brain | 4.22e-10 | 53 |
segmental subdivision of nervous system | 6.01e-09 | 13 |
brainstem | 3.49e-08 | 6 |
pre-chordal neural plate | 4.79e-08 | 61 |
segmental subdivision of hindbrain | 5.72e-08 | 12 |
hindbrain | 5.72e-08 | 12 |
presumptive hindbrain | 5.72e-08 | 12 |
testis | 1.76e-07 | 8 |
regional part of diencephalon | 2.24e-07 | 4 |
male reproductive organ | 5.64e-07 | 11 |