FFCP PHASE1:Hg19::chr11:119187829..119187847,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:119187829..119187847,-
|short_description=p1@MCAM
|description=CAGE_peak_1_at_MCAM_5end
|association_with_transcript=0bp_to_ENST00000525555,ENST0000052619...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4162 | |EntrezGene=4162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6934 | |HGNC=6934 | ||
|TSSclassifier=strong | |||
|UniProt=P43121 | |UniProt=P43121 | ||
|association_with_transcript=0bp_to_ENST00000525555,ENST00000526190,ENST00000527913,ENST00000528502,ENST00000528533,ENST00000529686,ENST00000530006,ENST00000530706,ENST00000530937,NM_006500,uc001pwf.2_5end | |||
|cluster_id=chr11:119187829..119187847,- | |||
|coexpression_cluster_id=C3095 | |||
|description=CAGE_peak_1_at_MCAM_5end | |||
|id=chr11:119187829..119187847,- | |||
|ontology_enrichment_celltype=CL:0000115!7.42e-16!35;CL:0002139!8.16e-16!24;CL:0002078!1.54e-14!44;CL:0000071!3.28e-12!18;CL:0002546!3.28e-12!18;CL:0000213!1.48e-07!57;CL:0000215!1.48e-07!57;CL:1000413!1.49e-07!9;CL:0000066!2.01e-07!254;CL:1000449!2.55e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.77e-16;24!CL:0000115;3.33e-14;36!CL:0000071;2.21e-12;18!CL:0002078;3.97e-10;45!CL:1000449;1.05e-08;15!CL:1000413;1.17e-07;9!CL:1000497;1.23e-07;17!CL:0002518;1.23e-07;17!CL:0002681;3.73e-07;12!CL:0002584;3.73e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.23e-16,36;CL:0002139,4.70e-16,24;CL:0002078,3.57e-15,45;CL:0000071,2.17e-12,18;CL:0002546,2.17e-12,18;CL:1000449,1.04e-08,15;CL:0000213,5.26e-08,58;CL:0000215,5.26e-08,58;CL:1000413,1.18e-07,9;CL:1000497,1.22e-07,17;CL:0002518,1.22e-07,17;CL:0000066,2.78e-07,253;CL:0002681,3.63e-07,12;CL:0002584,3.63e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;2.21e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!5.99e-23!286;UBERON:0000483!1.19e-19!309;UBERON:0004111!1.74e-19!241;UBERON:0000119!3.81e-19!312;UBERON:0000468!2.13e-17!659;UBERON:0000025!5.41e-16!194;UBERON:0000481!8.68e-16!347;UBERON:0000475!2.36e-15!365;UBERON:0000064!2.61e-15!219;UBERON:0000480!4.12e-15!626;UBERON:0000467!6.00e-15!625;UBERON:0001986!3.28e-12!18;UBERON:0004638!3.28e-12!18;UBERON:0004852!3.28e-12!18;UBERON:0007023!3.54e-12!115;UBERON:0000922!1.64e-10!612;UBERON:0003914!3.03e-10!118;UBERON:0002050!6.95e-10!605;UBERON:0005423!6.95e-10!605;UBERON:0000923!1.24e-09!604;UBERON:0005291!1.24e-09!604;UBERON:0006598!1.24e-09!604;UBERON:0002532!1.24e-09!604;UBERON:0000487!5.12e-09!22;UBERON:0000055!9.63e-09!69;UBERON:0002049!1.52e-08!79;UBERON:0007798!1.52e-08!79;UBERON:0004876!4.34e-08!20;UBERON:0000080!4.38e-08!18;UBERON:0002120!4.38e-08!18;UBERON:0004875!4.38e-08!18;UBERON:0005721!4.38e-08!18;UBERON:0005754!4.38e-08!18;UBERON:0007297!4.38e-08!18;UBERON:0000063!5.93e-08!97;UBERON:0003104!6.03e-08!238;UBERON:0009142!6.03e-08!238;UBERON:0006555!7.95e-08!17;UBERON:0005103!7.95e-08!17;UBERON:0000083!7.95e-08!17;UBERON:0009201!7.95e-08!17;UBERON:0004819!7.95e-08!17;UBERON:0006553!7.95e-08!17;UBERON:0003074!7.95e-08!17;UBERON:0003060!7.95e-08!17;UBERON:0003103!1.01e-07!69;UBERON:0006914!1.05e-07!25;UBERON:0000353!1.26e-07!17;UBERON:0003915!1.49e-07!9;UBERON:0004700!1.49e-07!9;UBERON:0001917!1.49e-07!9;UBERON:0003887!2.36e-07!21;UBERON:0004211!2.55e-07!16;UBERON:0001285!2.55e-07!16;UBERON:0007684!2.55e-07!16;UBERON:0003220!2.55e-07!16;UBERON:0004208!2.55e-07!16;UBERON:0001048!2.88e-07!168;UBERON:0004121!5.17e-07!169;UBERON:0000466!5.31e-07!126;UBERON:0000062!5.98e-07!511;UBERON:0003075!9.21e-07!86;UBERON:0007284!9.21e-07!86;UBERON:0000924!9.52e-07!173;UBERON:0006601!9.52e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.21e-12;18!UBERON:0001986;2.21e-12;18!UBERON:0004852;2.21e-12;18!UBERON:0000487;2.37e-09;22!UBERON:0000353;7.26e-09;15!UBERON:0006555;1.05e-08;15!UBERON:0004819;1.05e-08;15!UBERON:0001285;1.05e-08;15!UBERON:0007684;1.05e-08;15!UBERON:0006914;8.34e-08;25!UBERON:0003915;1.17e-07;9!UBERON:0004700;1.17e-07;9!UBERON:0001917;1.17e-07;9!UBERON:0000490;1.32e-07;33!UBERON:0001225;3.73e-07;12!UBERON:0008987;3.73e-07;12 | |||
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| ||
|short_description=p1@MCAM | |||
}} | }} |
Latest revision as of 03:19, 16 September 2015
Short description: | p1@MCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MCAM_5end |
Coexpression cluster: | C3095_Endothelial_mature_Renal_aorta_Hepatic_melanoma_gall |
Association with transcript: | 0bp_to_ENST00000525555, ENST00000526190, ENST00000527913, ENST00000528502, ENST00000528533, ENST00000529686, ENST00000530006, ENST00000530706, ENST00000530937, NM_006500, uc001pwf.2_5end |
EntrezGene: | MCAM |
HGNC: | 6934 |
UniProt: | P43121 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.23e-16 | 36 |
endothelial cell of vascular tree | 4.70e-16 | 24 |
meso-epithelial cell | 3.57e-15 | 45 |
blood vessel endothelial cell | 2.17e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.17e-12 | 18 |
epithelial cell of nephron | 1.04e-08 | 15 |
lining cell | 5.26e-08 | 58 |
barrier cell | 5.26e-08 | 58 |
endothelial cell of artery | 1.18e-07 | 9 |
kidney cell | 1.22e-07 | 17 |
kidney epithelial cell | 1.22e-07 | 17 |
epithelial cell | 2.78e-07 | 253 |
kidney cortical cell | 3.63e-07 | 12 |
renal cortical epithelial cell | 3.63e-07 | 12 |