FFCP PHASE1:Hg19::chr11:118900144..118900155,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:118900144..118900155,-
|short_description=p6@SLC37A4
|description=CAGE_peak_6_at_SLC37A4_5end
|association_with_transcript=-47bp_to_ENST00000529510_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4061 | |HGNC=4061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000529510_5end | |||
|cluster_id=chr11:118900144..118900155,- | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_6_at_SLC37A4_5end | |||
|id=chr11:118900144..118900155,- | |||
|ontology_enrichment_celltype=CL:0000181!1.29e-09!12;CL:0000417!1.29e-09!12;CL:0000668!1.29e-09!12;CL:0000414!1.29e-09!12;CL:0000412!1.29e-09!12;CL:0000182!1.29e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.07e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.91e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.22e-18;2!UBERON:0003918;8.09e-14;10!UBERON:0007687;8.09e-14;10!UBERON:0005754;4.64e-10;1!UBERON:0006242;8.99e-10;1!UBERON:0003104;1.43e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!8.59e-16!55;UBERON:0005173!8.59e-16!55;UBERON:0002417!1.23e-13!61;UBERON:0000916!1.23e-13!61;UBERON:0002113!2.34e-10!27;UBERON:0003918!2.34e-10!27;UBERON:0005095!2.34e-10!27;UBERON:0007687!2.34e-10!27;UBERON:0000489!7.80e-10!32;UBERON:0006947!2.06e-08!3;UBERON:0004054!2.06e-08!3;UBERON:0004876!2.61e-08!20;UBERON:0007023!1.11e-07!115;UBERON:0003887!1.40e-07!21;UBERON:0006554!1.61e-07!44;UBERON:0003135!1.76e-07!11;UBERON:0005057!1.96e-07!26;UBERON:0000080!2.08e-07!18;UBERON:0002120!2.08e-07!18;UBERON:0004875!2.08e-07!18;UBERON:0005721!2.08e-07!18;UBERON:0005754!2.08e-07!18;UBERON:0007297!2.08e-07!18;UBERON:0002107!2.14e-07!19;UBERON:0006925!2.14e-07!19;UBERON:0008836!2.14e-07!19;UBERON:0001008!2.80e-07!45;UBERON:0005177!7.57e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.14e-17;17!UBERON:0002108;1.21e-16;4!UBERON:0005409;2.16e-13;22!UBERON:0006947;1.41e-12;3!UBERON:0004054;1.41e-12;3!UBERON:0000998;4.64e-10;1!UBERON:0001301;4.64e-10;1!UBERON:0006868;4.64e-10;1!UBERON:0005904;1.17e-09;4!UBERON:0002423;1.02e-08;25!UBERON:0004921;7.11e-08;33!UBERON:0002107;9.76e-08;19!UBERON:0006925;9.76e-08;19!UBERON:0005172;9.01e-07;52!UBERON:0005173;9.01e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.92e-17,17;UBERON:0002108,1.38e-16,4;UBERON:0005172,1.69e-14,54;UBERON:0005173,1.69e-14,54;UBERON:0002417,6.74e-13,60;UBERON:0000916,6.74e-13,60;UBERON:0006947,1.59e-12,3;UBERON:0004054,1.59e-12,3;UBERON:0005409,8.16e-12,25;UBERON:0001301,4.44e-10,1;UBERON:0000998,5.79e-10,1;UBERON:0006868,5.79e-10,1;UBERON:0005904,1.28e-09,4;UBERON:0009497,1.03e-08,25;UBERON:0000015,1.03e-08,25;UBERON:0002423,1.03e-08,25;UBERON:0006235,1.03e-08,25;UBERON:0004161,1.03e-08,25;UBERON:0002113,4.53e-08,26;UBERON:0003918,4.53e-08,26;UBERON:0011143,4.53e-08,26;UBERON:0005095,4.53e-08,26;UBERON:0007687,4.53e-08,26;UBERON:0002107,9.34e-08,19;UBERON:0006925,9.34e-08,19;UBERON:0008836,9.34e-08,19;UBERON:0003929,3.16e-07,54;UBERON:0004921,3.41e-07,118;UBERON:0005177,4.82e-07,101;UBERON:0000489,9.68e-07,31 | |||
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| ||
|short_description=p6@SLC37A4 | |||
}} | }} |
Latest revision as of 02:20, 16 September 2015
Short description: | p6@SLC37A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC37A4_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -47bp_to_ENST00000529510_5end |
EntrezGene: | NA |
HGNC: | 4061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.91e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.92e-17 | 17 |
small intestine | 1.38e-16 | 4 |
abdomen element | 1.69e-14 | 54 |
abdominal segment element | 1.69e-14 | 54 |
abdominal segment of trunk | 6.74e-13 | 60 |
abdomen | 6.74e-13 | 60 |
male genital duct | 1.59e-12 | 3 |
internal male genitalia | 1.59e-12 | 3 |
gastrointestinal system | 8.16e-12 | 25 |
epididymis | 4.44e-10 | 1 |
seminal vesicle | 5.79e-10 | 1 |
seminal fluid secreting gland | 5.79e-10 | 1 |
duct of male reproductive system | 1.28e-09 | 4 |
epithelium of foregut-midgut junction | 1.03e-08 | 25 |
anatomical boundary | 1.03e-08 | 25 |
hepatobiliary system | 1.03e-08 | 25 |
foregut-midgut junction | 1.03e-08 | 25 |
septum transversum | 1.03e-08 | 25 |
kidney | 4.53e-08 | 26 |
kidney mesenchyme | 4.53e-08 | 26 |
upper urinary tract | 4.53e-08 | 26 |
kidney rudiment | 4.53e-08 | 26 |
kidney field | 4.53e-08 | 26 |
liver | 9.34e-08 | 19 |
digestive gland | 9.34e-08 | 19 |
liver bud | 9.34e-08 | 19 |
gut epithelium | 3.16e-07 | 54 |
subdivision of digestive tract | 3.41e-07 | 118 |
trunk region element | 4.82e-07 | 101 |
cavitated compound organ | 9.68e-07 | 31 |