FFCP PHASE1:Hg19::chr19:14544099..14544191,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5585 | |EntrezGene=5585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9405 | |HGNC=9405 | ||
|TSSclassifier=strong | |||
|UniProt=Q16512 | |UniProt=Q16512 | ||
|association_with_transcript=0bp_to_ENST00000242783,NM_002741,uc002myp.2_5end | |association_with_transcript=0bp_to_ENST00000242783,NM_002741,uc002myp.2_5end | ||
|cluster_id=chr19:14544099..14544191,+ | |||
|description=CAGE_peak_1_at_PKN1_5end | |description=CAGE_peak_1_at_PKN1_5end | ||
|id=chr19:14544099..14544191,+ | |id=chr19:14544099..14544191,+ | ||
|ontology_enrichment_celltype=CL:0000222!5.62e-22!119;CL:0002078!2.24e-16!44;CL:0000115!4.99e-16!35;CL:0000213!3.24e-15!57;CL:0000215!3.24e-15!57;CL:0002139!2.46e-14!24;CL:0000071!3.99e-12!18;CL:0002546!3.99e-12!18;CL:0000055!1.40e-09!180;CL:1000449!1.87e-08!16;CL:0000183!2.37e-08!59;CL:1000497!3.59e-08!18;CL:0002518!3.59e-08!18;CL:0000192!4.48e-08!42;CL:0000514!4.48e-08!42;CL:0000359!8.88e-08!32;CL:0002681!2.39e-07!13;CL:0002584!2.39e-07!13;CL:1000413!4.42e-07!9;CL:0000048!4.77e-07!430;CL:0000144!5.17e-07!625;CL:0002371!6.37e-07!591 | |ontology_enrichment_celltype=CL:0000222!5.62e-22!119;CL:0002078!2.24e-16!44;CL:0000115!4.99e-16!35;CL:0000213!3.24e-15!57;CL:0000215!3.24e-15!57;CL:0002139!2.46e-14!24;CL:0000071!3.99e-12!18;CL:0002546!3.99e-12!18;CL:0000055!1.40e-09!180;CL:1000449!1.87e-08!16;CL:0000183!2.37e-08!59;CL:1000497!3.59e-08!18;CL:0002518!3.59e-08!18;CL:0000192!4.48e-08!42;CL:0000514!4.48e-08!42;CL:0000359!8.88e-08!32;CL:0002681!2.39e-07!13;CL:0002584!2.39e-07!13;CL:1000413!4.42e-07!9;CL:0000048!4.77e-07!430;CL:0000144!5.17e-07!625;CL:0002371!6.37e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.18e-14;24!CL:0000115;5.28e-14;36!CL:0000071;3.74e-12;18!CL:0002078;2.95e-11;45!CL:0000213;2.74e-09;58!CL:0000215;2.74e-09;58!CL:1000449;2.65e-08;15!CL:1000497;5.13e-08;17!CL:0002518;5.13e-08;17!CL:0000359;3.35e-07;32!CL:0002681;3.45e-07;12!CL:0002584;3.45e-07;12!CL:1000413;4.44e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.44e-23,121;CL:0002078,5.78e-17,45;CL:0000115,1.24e-16,36;CL:0000213,9.15e-16,58;CL:0000215,9.15e-16,58;CL:0002139,2.46e-14,24;CL:0000071,3.99e-12,18;CL:0002546,3.99e-12,18;CL:1000449,2.69e-08,15;CL:0000192,2.79e-08,43;CL:0000514,2.79e-08,43;CL:1000497,5.40e-08,17;CL:0002518,5.40e-08,17;CL:0000359,8.88e-08,32;CL:0002681,3.37e-07,12;CL:0002584,3.37e-07,12;CL:0000048,3.74e-07,427;CL:1000413,4.42e-07,9;CL:0000187,9.32e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;3.74e-12;18!CL:0000222;1.56e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.35e-20!118;UBERON:0000055!4.92e-20!69;UBERON:0002049!3.26e-19!79;UBERON:0007798!3.26e-19!79;UBERON:0001981!3.35e-18!60;UBERON:0007500!3.35e-18!60;UBERON:0004537!3.35e-18!60;UBERON:0006965!3.35e-18!60;UBERON:0004872!1.11e-17!84;UBERON:0001009!6.54e-17!113;UBERON:0004535!5.73e-16!110;UBERON:0001637!2.28e-13!42;UBERON:0003509!2.28e-13!42;UBERON:0004572!2.28e-13!42;UBERON:0001986!3.99e-12!18;UBERON:0004638!3.99e-12!18;UBERON:0004852!3.99e-12!18;UBERON:0003081!1.03e-10!216;UBERON:0000487!2.14e-09!22;UBERON:0006914!6.72e-09!25;UBERON:0004573!7.36e-09!33;UBERON:0004571!7.36e-09!33;UBERON:0000353!1.52e-08!17;UBERON:0004211!1.87e-08!16;UBERON:0001285!1.87e-08!16;UBERON:0007684!1.87e-08!16;UBERON:0003220!1.87e-08!16;UBERON:0004208!1.87e-08!16;UBERON:0006555!5.61e-08!17;UBERON:0005103!5.61e-08!17;UBERON:0000083!5.61e-08!17;UBERON:0009201!5.61e-08!17;UBERON:0004819!5.61e-08!17;UBERON:0006553!5.61e-08!17;UBERON:0003074!5.61e-08!17;UBERON:0003060!5.61e-08!17;UBERON:0005256!6.07e-08!143;UBERON:0000490!7.10e-08!138;UBERON:0001225!2.39e-07!13;UBERON:0008987!2.39e-07!13;UBERON:0003915!4.42e-07!9;UBERON:0004700!4.42e-07!9;UBERON:0001917!4.42e-07!9;UBERON:0004290!4.88e-07!70;UBERON:0000080!4.94e-07!18;UBERON:0002120!4.94e-07!18;UBERON:0004875!4.94e-07!18;UBERON:0005721!4.94e-07!18;UBERON:0005754!4.94e-07!18;UBERON:0007297!4.94e-07!18;UBERON:0003103!7.67e-07!69;UBERON:0003887!8.52e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.74e-12;18!UBERON:0001986;3.74e-12;18!UBERON:0004852;3.74e-12;18!UBERON:0007500;3.41e-11;56!UBERON:0001981;3.41e-11;56!UBERON:0004537;3.41e-11;56!UBERON:0003914;4.47e-11;74!UBERON:0000055;9.22e-11;65!UBERON:0001637;4.58e-10;42!UBERON:0003509;4.58e-10;42!UBERON:0004572;4.58e-10;42!UBERON:0000487;2.10e-09;22!UBERON:0006914;6.74e-09;25!UBERON:0002049;1.19e-08;75!UBERON:0007798;1.19e-08;75!UBERON:0006555;2.65e-08;15!UBERON:0004819;2.65e-08;15!UBERON:0001285;2.65e-08;15!UBERON:0007684;2.65e-08;15!UBERON:0000353;3.50e-08;15!UBERON:0004573;5.52e-08;33!UBERON:0004571;5.52e-08;33!UBERON:0001225;3.45e-07;12!UBERON:0008987;3.45e-07;12!UBERON:0003915;4.44e-07;9!UBERON:0004700;4.44e-07;9!UBERON:0001917;4.44e-07;9 | |||
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| ||
|short_description=p1@PKN1 | |short_description=p1@PKN1 | ||
}} | }} |
Latest revision as of 04:51, 16 September 2015
Short description: | p1@PKN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PKN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000242783, NM_002741, uc002myp.2_5end |
EntrezGene: | PKN1 |
HGNC: | 9405 |
UniProt: | Q16512 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.44e-23 | 121 |
meso-epithelial cell | 5.78e-17 | 45 |
endothelial cell | 1.24e-16 | 36 |
lining cell | 9.15e-16 | 58 |
barrier cell | 9.15e-16 | 58 |
endothelial cell of vascular tree | 2.46e-14 | 24 |
blood vessel endothelial cell | 3.99e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.99e-12 | 18 |
epithelial cell of nephron | 2.69e-08 | 15 |
smooth muscle cell | 2.79e-08 | 43 |
smooth muscle myoblast | 2.79e-08 | 43 |
kidney cell | 5.40e-08 | 17 |
kidney epithelial cell | 5.40e-08 | 17 |
vascular associated smooth muscle cell | 8.88e-08 | 32 |
kidney cortical cell | 3.37e-07 | 12 |
renal cortical epithelial cell | 3.37e-07 | 12 |
multi fate stem cell | 3.74e-07 | 427 |
endothelial cell of artery | 4.42e-07 | 9 |
muscle cell | 9.32e-07 | 55 |