FFCP PHASE1:Hg19::chr18:53070913..53070933,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=G0LNU8 | |UniProt=G0LNU8 | ||
|association_with_transcript=11bp_to_FR748219_5end | |association_with_transcript=11bp_to_FR748219_5end | ||
|cluster_id=chr18:53070913..53070933,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_16_at_TCF4_5end | |description=CAGE_peak_16_at_TCF4_5end | ||
|id=chr18:53070913..53070933,- | |id=chr18:53070913..53070933,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.89e-09;3!CL:0000047;3.02e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.94e-10,8;CL:0002615,2.07e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.49e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.54e-44!115;UBERON:0001017!7.66e-44!82;UBERON:0001049!1.39e-43!57;UBERON:0005068!1.39e-43!57;UBERON:0006241!1.39e-43!57;UBERON:0007135!1.39e-43!57;UBERON:0005743!3.47e-42!86;UBERON:0001893!2.34e-38!34;UBERON:0000073!9.59e-38!94;UBERON:0001016!9.59e-38!94;UBERON:0002020!1.02e-37!34;UBERON:0003528!1.02e-37!34;UBERON:0002616!1.19e-37!59;UBERON:0000955!1.77e-37!69;UBERON:0006238!1.77e-37!69;UBERON:0002791!5.52e-37!33;UBERON:0001869!2.05e-36!32;UBERON:0002780!2.78e-36!41;UBERON:0001890!2.78e-36!41;UBERON:0006240!2.78e-36!41;UBERON:0003080!4.12e-35!42;UBERON:0000956!2.39e-31!25;UBERON:0000203!2.39e-31!25;UBERON:0002346!3.24e-30!90;UBERON:0003075!7.33e-30!86;UBERON:0007284!7.33e-30!86;UBERON:0002619!4.87e-29!22;UBERON:0001950!1.77e-26!20;UBERON:0000153!1.22e-21!129;UBERON:0007811!1.22e-21!129;UBERON:0003056!2.49e-21!61;UBERON:0000924!3.97e-20!173;UBERON:0006601!3.97e-20!173;UBERON:0000033!6.70e-20!123;UBERON:0004121!1.52e-19!169;UBERON:0000475!4.29e-14!365;UBERON:0000025!5.68e-11!194;UBERON:0004111!4.58e-10!241;UBERON:0000064!6.47e-10!219;UBERON:0000200!1.25e-09!6;UBERON:0003076!1.38e-09!15;UBERON:0003057!1.38e-09!15;UBERON:0001871!2.94e-09!7;UBERON:0002420!1.02e-08!9;UBERON:0007245!1.02e-08!9;UBERON:0010009!1.02e-08!9;UBERON:0010011!1.02e-08!9;UBERON:0000454!1.02e-08!9;UBERON:0004733!1.13e-08!12;UBERON:0002028!1.13e-08!12;UBERON:0007277!1.13e-08!12;UBERON:0002021!2.85e-08!5;UBERON:0001872!3.24e-08!5;UBERON:0002308!4.96e-08!9;UBERON:0000125!4.96e-08!9;UBERON:0003688!5.21e-08!6;UBERON:0002358!5.21e-08!6;UBERON:0003684!5.21e-08!6;UBERON:0001178!5.21e-08!6;UBERON:0000349!5.58e-08!5;UBERON:0000477!6.79e-08!286;UBERON:0004732!8.10e-08!13;UBERON:0000468!1.03e-07!659;UBERON:0000062!3.04e-07!511;UBERON:0002298!5.27e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.79e-67;22!UBERON:0001950;3.15e-61;20!UBERON:0000956;8.62e-59;25!UBERON:0000203;8.62e-59;25!UBERON:0001869;3.12e-48;32!UBERON:0001893;1.16e-43;34!UBERON:0002791;1.25e-43;32!UBERON:0003528;1.61e-40;34!UBERON:0002020;1.61e-40;34!UBERON:0002780;4.06e-31;41!UBERON:0001890;4.06e-31;41!UBERON:0000073;4.30e-24;53!UBERON:0002616;4.30e-24;53!UBERON:0000200;1.33e-20;6!UBERON:0001017;5.16e-18;75!UBERON:0000955;1.56e-17;68!UBERON:0002021;2.31e-17;5!UBERON:0001871;2.50e-17;6!UBERON:0001872;3.27e-17;5!UBERON:0000349;1.47e-16;5!UBERON:0001016;2.05e-15;83!UBERON:0003688;2.71e-12;6!UBERON:0002358;2.71e-12;6!UBERON:0003684;2.71e-12;6!UBERON:0001178;2.71e-12;6!UBERON:0001870;2.70e-11;3!UBERON:0004457;4.18e-08;9!UBERON:0000042;4.18e-08;9!UBERON:0002702;4.56e-08;2!UBERON:0002771;4.88e-08;2!UBERON:0001876;1.28e-07;2!UBERON:0001954;1.33e-07;2!UBERON:0003022;1.33e-07;2!UBERON:0002421;1.33e-07;2!UBERON:0002600;1.33e-07;2!UBERON:0011216;6.06e-07;132!UBERON:0007023;8.04e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.65e-67,22;UBERON:0001950,3.28e-61,20;UBERON:0000956,8.23e-59,25;UBERON:0000203,8.23e-59,25;UBERON:0001869,3.81e-54,32;UBERON:0001893,1.17e-50,34;UBERON:0002791,2.04e-49,32;UBERON:0001017,9.21e-49,81;UBERON:0003528,3.22e-46,34;UBERON:0002020,3.22e-46,34;UBERON:0002780,1.38e-44,41;UBERON:0001890,1.38e-44,41;UBERON:0003080,1.38e-44,41;UBERON:0006240,1.38e-44,41;UBERON:0001016,5.26e-43,89;UBERON:0001049,2.95e-42,56;UBERON:0005068,2.95e-42,56;UBERON:0006241,2.95e-42,56;UBERON:0007135,2.95e-42,56;UBERON:0000073,6.86e-42,53;UBERON:0002616,6.86e-42,53;UBERON:0000955,1.66e-38,68;UBERON:0006238,1.66e-38,68;UBERON:0003075,9.35e-31,82;UBERON:0007284,9.35e-31,82;UBERON:0002346,5.90e-29,86;UBERON:0003056,6.09e-28,61;UBERON:0004121,4.66e-26,171;UBERON:0000924,4.66e-26,171;UBERON:0006601,4.66e-26,171;UBERON:0010371,5.15e-26,104;UBERON:0007023,1.19e-24,114;UBERON:0010314,1.51e-21,132;UBERON:0000200,1.55e-20,6;UBERON:0002021,2.44e-17,5;UBERON:0001871,2.47e-17,6;UBERON:0001872,3.28e-17,5;UBERON:0000349,1.18e-16,5;UBERON:0011216,1.74e-16,223;UBERON:0003688,3.66e-12,6;UBERON:0002358,3.66e-12,6;UBERON:0003684,3.66e-12,6;UBERON:0001178,3.66e-12,6;UBERON:0001870,2.75e-11,3;UBERON:0000025,2.72e-10,192;UBERON:0004111,1.08e-08,240;UBERON:0002702,4.72e-08,2;UBERON:0002771,5.23e-08,2;UBERON:0001876,1.16e-07,2;UBERON:0001954,1.20e-07,2;UBERON:0003022,1.20e-07,2;UBERON:0002421,1.20e-07,2;UBERON:0002600,1.20e-07,2 | |||
|phase1_expression=1.09007027562334,0.856402095563933,1.40954404095971,1.0007329835313,1.78784437770915,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0.572471974262113,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,1.5905718941022,1.45990461090791,0,0,0,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0.622422070799533,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0.211931901159562,0.300091096084402,0.103052529238439,1.28820270022815,0.18611685633159,0.506328996723799,0.68205903612839,0.252433774244115,0.552299391853796,0.323292113637624,0.710019185033229,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,5.20559415430487,3.09315525111078,4.35542289869307,4.46557126157214,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,1.68808170616869,0.841980283299221,1.15325234330131,2.04682899626681,0.64341568457443,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,3.21367859688319,0.096670718292122,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,7.95318118213038,3.65740482667333,0,0,0,1.59398390600856,0.552567831062295,0,0,0,0,0,0,0,0.887790650732402,0,0,4.84666373047609,7.51421595110995,19.9613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0.964771509003264,0,2.65390223834939,1.18219047581419,3.94893714877151,0,0,0.846452843541768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.943615861729479,0,0.937057782901357,0,0,0,0.394584402849391,0,15.9157836047855,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,11.6491864558817,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0.958337652243951,0,0.859530882839914,0,2.79282401272254,2.06244381610515,0,0,0.429226048136571,0,0.403100834920358,0.360299883542404,0,0,0,0,0,0,5.56660782866512,4.90332262001672,0,0,0,0,0,9.5984299519679,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.646414781807753,0.52893040697076,0,0,0.427149650270779,1.41483874589699,0.414239055347196,0,0,0,0,0,0,0,0,0,20.3795681392407,19.6462286492161,7.38626491168349,0.573409195690071,0.887432412294818,0.869349641179368,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18943867989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0,0,0.425149840203366,0,0,0,0,0,0,0,6.42292250964595,11.3357261060468,4.46974805360024,10.6660509405193,19.1574489128506,7.39982601367131,6.29755017964219,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,10.1981752773776,4.68646859168308,8.47415865654855,8.75138180675914,22.425967169747,0.548257766857182,0,0.351742488719241,0,0,0,0,0,0.0887023701626388,0,0,2.37894065418911,6.24841348847066,0,0,0.156986185701028,0.628462359664008,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39997695141398,0,0.397901550322736,0,0.45178432815584,0,0,0.154348316215889,0,0,0.735444965261716,0,1.76677620403451,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.573358332605805,0.631086248772738,9.31483415615531,22.2538852073592,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,1.65833887891756,0.827463966895162,0.639701945702943,0.952257725854961,0.0645889098360061,0.248298857183432,0,0.700118741059814,0.202117188958219,1.52401723527873,1.71116650542641,0.26940821205835,0.143444410785353,0.665320713092027,0,0,0,0,0,2.32258743947446,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=1.09007027562334,0.856402095563933,1.40954404095971,1.0007329835313,1.78784437770915,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0.572471974262113,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,1.5905718941022,1.45990461090791,0,0,0,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0.622422070799533,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0.211931901159562,0.300091096084402,0.103052529238439,1.28820270022815,0.18611685633159,0.506328996723799,0.68205903612839,0.252433774244115,0.552299391853796,0.323292113637624,0.710019185033229,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,5.20559415430487,3.09315525111078,4.35542289869307,4.46557126157214,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,1.68808170616869,0.841980283299221,1.15325234330131,2.04682899626681,0.64341568457443,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,3.21367859688319,0.096670718292122,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,7.95318118213038,3.65740482667333,0,0,0,1.59398390600856,0.552567831062295,0,0,0,0,0,0,0,0.887790650732402,0,0,4.84666373047609,7.51421595110995,19.9613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0.964771509003264,0,2.65390223834939,1.18219047581419,3.94893714877151,0,0,0.846452843541768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.943615861729479,0,0.937057782901357,0,0,0,0.394584402849391,0,15.9157836047855,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,11.6491864558817,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0.958337652243951,0,0.859530882839914,0,2.79282401272254,2.06244381610515,0,0,0.429226048136571,0,0.403100834920358,0.360299883542404,0,0,0,0,0,0,5.56660782866512,4.90332262001672,0,0,0,0,0,9.5984299519679,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.646414781807753,0.52893040697076,0,0,0.427149650270779,1.41483874589699,0.414239055347196,0,0,0,0,0,0,0,0,0,20.3795681392407,19.6462286492161,7.38626491168349,0.573409195690071,0.887432412294818,0.869349641179368,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18943867989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0,0,0.425149840203366,0,0,0,0,0,0,0,6.42292250964595,11.3357261060468,4.46974805360024,10.6660509405193,19.1574489128506,7.39982601367131,6.29755017964219,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,10.1981752773776,4.68646859168308,8.47415865654855,8.75138180675914,22.425967169747,0.548257766857182,0,0.351742488719241,0,0,0,0,0,0.0887023701626388,0,0,2.37894065418911,6.24841348847066,0,0,0.156986185701028,0.628462359664008,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39997695141398,0,0.397901550322736,0,0.45178432815584,0,0,0.154348316215889,0,0,0.735444965261716,0,1.76677620403451,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.573358332605805,0.631086248772738,9.31483415615531,22.2538852073592,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,1.65833887891756,0.827463966895162,0.639701945702943,0.952257725854961,0.0645889098360061,0.248298857183432,0,0.700118741059814,0.202117188958219,1.52401723527873,1.71116650542641,0.26940821205835,0.143444410785353,0.665320713092027,0,0,0,0,0,2.32258743947446,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p16@TCF4 | |short_description=p16@TCF4 | ||
}} | }} |
Latest revision as of 21:02, 19 September 2015
Short description: | p16@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TCF4_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 11bp_to_FR748219_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | G0LNU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.94e-10 | 8 |
adipocyte of omentum tissue | 2.07e-09 | 3 |