FFCP PHASE1:Hg19::chr17:995196..995215,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZT60 | |UniProt=Q6ZT60 | ||
|association_with_transcript=-96bp_to_uc002fsh.1_5end | |association_with_transcript=-96bp_to_uc002fsh.1_5end | ||
|cluster_id=chr17:995196..995215,- | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_22_at_ABR_5end | |description=CAGE_peak_22_at_ABR_5end | ||
|id=chr17:995196..995215,- | |id=chr17:995196..995215,- | ||
|ontology_enrichment_celltype=CL:0002623!6.71e-14!3;CL:0002368!2.08e-10!13;CL:0002076!3.44e-09!43;CL:0000622!1.70e-08!5;CL:0000223!2.56e-07!59;CL:0002202!3.14e-07!9;CL:0002632!3.14e-07!9;CL:0000154!3.90e-07!6 | |ontology_enrichment_celltype=CL:0002623!6.71e-14!3;CL:0002368!2.08e-10!13;CL:0002076!3.44e-09!43;CL:0000622!1.70e-08!5;CL:0000223!2.56e-07!59;CL:0002202!3.14e-07!9;CL:0002632!3.14e-07!9;CL:0000154!3.90e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002623;4.57e-55;3!CL:0000622;2.11e-33;5!CL:0000154;5.65e-28;6!CL:0000150;6.60e-19;9!CL:0002251;7.36e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.01e-55,3;CL:0000622,2.23e-33,5;CL:0000154,5.91e-28,6;CL:0000150,6.80e-19,9;CL:0002251,7.46e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.30e-19;1!UBERON:0008814;2.37e-10;2!UBERON:0010056;2.37e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001044!1.35e-17!6;UBERON:0003293!1.35e-17!6;UBERON:0003294!1.35e-17!6;UBERON:0010047!1.35e-17!6;UBERON:0000167!1.35e-17!6;UBERON:0001004!4.53e-14!72;UBERON:0000078!6.85e-14!18;UBERON:0006947!3.38e-13!3;UBERON:0004054!3.38e-13!3;UBERON:0000161!3.52e-12!35;UBERON:0000464!5.95e-12!104;UBERON:0000166!1.05e-11!21;UBERON:0007023!1.52e-11!115;UBERON:0004921!6.27e-11!129;UBERON:0004185!6.27e-11!129;UBERON:0004119!9.23e-11!169;UBERON:0000925!9.23e-11!169;UBERON:0006595!9.23e-11!169;UBERON:0001041!1.61e-10!98;UBERON:0003408!2.00e-10!10;UBERON:0000065!4.78e-10!53;UBERON:0005904!5.25e-10!4;UBERON:0005178!5.66e-10!34;UBERON:0002224!5.66e-10!34;UBERON:0007196!6.32e-10!14;UBERON:0001558!6.32e-10!14;UBERON:0000077!7.38e-10!130;UBERON:0005181!1.24e-09!35;UBERON:0003127!1.36e-09!2;UBERON:0003126!1.36e-09!7;UBERON:0001005!1.36e-09!7;UBERON:0001007!3.80e-09!155;UBERON:0001555!3.80e-09!155;UBERON:0007026!3.80e-09!155;UBERON:0000466!5.09e-09!126;UBERON:0003135!5.56e-09!11;UBERON:0000165!1.97e-08!28;UBERON:0000930!1.97e-08!28;UBERON:0003101!4.42e-08!22;UBERON:0000079!4.42e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;5.65e-28;6!UBERON:0003293;5.65e-28;6!UBERON:0003294;5.65e-28;6!UBERON:0010047;5.65e-28;6!UBERON:0003408;5.65e-28;6!UBERON:0000167;5.65e-28;6!UBERON:0001041;3.29e-21;14!UBERON:0002372;1.56e-19;1!UBERON:0001961;1.56e-19;1!UBERON:0001744;1.56e-19;1!UBERON:0001042;1.56e-19;1!UBERON:0001735;1.56e-19;1!UBERON:0000165;2.41e-16;28!UBERON:0000161;1.01e-15;19!UBERON:0000166;1.01e-15;19!UBERON:0000002;8.27e-13;6!UBERON:0001560;8.27e-13;6!UBERON:0004921;6.73e-12;33!UBERON:0006562;1.89e-10;2!UBERON:0003127;2.37e-10;2!UBERON:0000341;2.37e-10;2!UBERON:0000153;7.02e-08;54!UBERON:0007811;1.30e-07;52!UBERON:0001043;2.05e-07;3!UBERON:0001723;2.55e-07;3!UBERON:0001033;2.55e-07;3!UBERON:0000033;6.88e-07;50!UBERON:0001555;8.78e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,5.91e-28,6;UBERON:0003293,5.91e-28,6;UBERON:0003294,5.91e-28,6;UBERON:0010047,5.91e-28,6;UBERON:0000167,5.91e-28,6;UBERON:0000166,9.36e-21,22;UBERON:0002372,1.56e-19,1;UBERON:0001961,1.56e-19,1;UBERON:0001744,1.56e-19,1;UBERON:0001735,1.56e-19,1;UBERON:0003408,4.47e-17,10;UBERON:0000165,8.71e-16,29;UBERON:0000930,8.71e-16,29;UBERON:0000002,8.78e-13,6;UBERON:0001560,8.78e-13,6;UBERON:0000161,9.69e-13,36;UBERON:0000153,1.96e-10,62;UBERON:0007811,1.96e-10,62;UBERON:0000341,2.07e-10,2;UBERON:0003127,2.72e-10,2;UBERON:0001041,6.44e-10,87;UBERON:0001444,2.23e-09,49;UBERON:0001004,1.08e-08,74;UBERON:0001042,3.25e-08,10;UBERON:0009145,3.25e-08,10;UBERON:0000033,3.29e-08,56;UBERON:0006562,1.51e-07,11;UBERON:0001043,2.05e-07,3;UBERON:0009143,2.05e-07,3;UBERON:0001723,2.47e-07,3;UBERON:0001033,2.47e-07,3;UBERON:0010056,2.47e-07,3;UBERON:0004921,3.84e-07,118 | |||
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| ||
|short_description=p22@ABR | |short_description=p22@ABR | ||
}} | }} |
Latest revision as of 17:42, 18 September 2015
Short description: | p22@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_ABR_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | -96bp_to_uc002fsh.1_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | Q6ZT60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.01e-55 | 3 |
acinar cell | 2.23e-33 | 5 |
protein secreting cell | 5.91e-28 | 6 |
glandular epithelial cell | 6.80e-19 | 9 |
epithelial cell of alimentary canal | 7.46e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 5.91e-28 | 6 |
gland of oral region | 5.91e-28 | 6 |
gland of foregut | 5.91e-28 | 6 |
oral gland | 5.91e-28 | 6 |
oral cavity | 5.91e-28 | 6 |
oral opening | 9.36e-21 | 22 |
tonsil | 1.56e-19 | 1 |
mucosa-associated lymphoid tissue | 1.56e-19 | 1 |
lymphoid tissue | 1.56e-19 | 1 |
tonsillar ring | 1.56e-19 | 1 |
gland of gut | 4.47e-17 | 10 |
mouth | 8.71e-16 | 29 |
stomodeum | 8.71e-16 | 29 |
uterine cervix | 8.78e-13 | 6 |
neck of organ | 8.78e-13 | 6 |
orifice | 9.69e-13 | 36 |
anterior region of body | 1.96e-10 | 62 |
craniocervical region | 1.96e-10 | 62 |
throat | 2.07e-10 | 2 |
open tracheal system trachea | 2.72e-10 | 2 |
foregut | 6.44e-10 | 87 |
subdivision of head | 2.23e-09 | 49 |
respiratory system | 1.08e-08 | 74 |
chordate pharynx | 3.25e-08 | 10 |
pharyngeal region of foregut | 3.25e-08 | 10 |
head | 3.29e-08 | 56 |
pharynx | 1.51e-07 | 11 |
esophagus | 2.05e-07 | 3 |
esophageal region | 2.05e-07 | 3 |
tongue | 2.47e-07 | 3 |
gustatory system | 2.47e-07 | 3 |
future tongue | 2.47e-07 | 3 |
subdivision of digestive tract | 3.84e-07 | 118 |