FFCP PHASE1:Hg19::chr12:6950061..6950108,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2784 | |EntrezGene=2784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4400 | |HGNC=4400 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_uc009zfe.2_5end | |association_with_transcript=28bp_to_uc009zfe.2_5end | ||
|cluster_id=chr12:6950061..6950108,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_GNB3_5end | |description=CAGE_peak_1_at_GNB3_5end | ||
|id=chr12:6950061..6950108,+ | |id=chr12:6950061..6950108,+ | ||
|ontology_enrichment_celltype=CL:0002586!1.14e-10!3;CL:0000149!4.37e-08!4 | |ontology_enrichment_celltype=CL:0002586!1.14e-10!3;CL:0000149!4.37e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.96e-27;3!CL:0000149;9.46e-21;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.05e-27,3;CL:0000149,9.78e-21,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.81e-13;3!UBERON:0006601;4.47e-07;82 | |||
|ontology_enrichment_disease=DOID:1287!2.13e-07!4;DOID:114!2.20e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@GNB3 | |short_description=p1@GNB3 | ||
}} | }} |
Latest revision as of 04:52, 20 September 2015
Short description: | p1@GNB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNB3_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 28bp_to_uc009zfe.2_5end |
EntrezGene: | GNB3 |
HGNC: | 4400 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.05e-27 | 3 |
visual pigment cell | 9.78e-21 | 4 |