FFCP PHASE1:Hg19::chr17:79829190..79829260,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=396 | |EntrezGene=396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=678 | |HGNC=678 | ||
|TSSclassifier=strong | |||
|UniProt=A8MXW0 | |UniProt=A8MXW0 | ||
|association_with_transcript=0bp_to_ENST00000400721,uc002kbq.2,uc002kbr.2,uc010dig.1_5end | |association_with_transcript=0bp_to_ENST00000400721,uc002kbq.2,uc002kbr.2,uc010dig.1_5end | ||
|cluster_id=chr17:79829190..79829260,- | |||
|coexpression_cluster_id=C2155 | |||
|description=CAGE_peak_1_at_ARHGDIA_5end | |description=CAGE_peak_1_at_ARHGDIA_5end | ||
|id=chr17:79829190..79829260,- | |id=chr17:79829190..79829260,- | ||
|ontology_enrichment_celltype=CL:0002371!5.92e-46!591;CL:0000144!7.90e-41!625;CL:0000548!2.23e-30!679;CL:0000004!2.23e-30!679;CL:0000255!2.23e-30!679;CL:0000012!3.19e-29!682;CL:0000723!7.48e-23!436;CL:0000048!1.08e-21!430;CL:0000003!7.84e-21!722;CL:0000055!7.99e-21!180;CL:0000034!3.50e-20!444;CL:0000222!2.08e-19!119;CL:0000183!1.93e-15!59;CL:0000220!1.33e-14!246;CL:0000192!5.14e-14!42;CL:0000514!5.14e-14!42;CL:0002321!6.61e-14!248;CL:0000063!7.01e-14!578;CL:0000680!4.00e-13!57;CL:0000056!4.00e-13!57;CL:0000355!4.00e-13!57;CL:0000187!4.57e-13!54;CL:0000359!8.50e-13!32;CL:0002320!2.25e-11!365;CL:0000219!2.96e-11!390;CL:0000115!8.69e-11!35;CL:0000134!1.69e-10!358;CL:0000057!1.76e-10!75;CL:0000393!6.87e-10!60;CL:0000211!6.87e-10!60;CL:0002078!1.14e-09!44;CL:0002139!3.55e-08!24;CL:0000071!5.27e-08!18;CL:0002546!5.27e-08!18;CL:1000449!2.32e-07!16;CL:0000213!6.70e-07!57;CL:0000215!6.70e-07!57;CL:0002057!7.11e-07!42 | |ontology_enrichment_celltype=CL:0002371!5.92e-46!591;CL:0000144!7.90e-41!625;CL:0000548!2.23e-30!679;CL:0000004!2.23e-30!679;CL:0000255!2.23e-30!679;CL:0000012!3.19e-29!682;CL:0000723!7.48e-23!436;CL:0000048!1.08e-21!430;CL:0000003!7.84e-21!722;CL:0000055!7.99e-21!180;CL:0000034!3.50e-20!444;CL:0000222!2.08e-19!119;CL:0000183!1.93e-15!59;CL:0000220!1.33e-14!246;CL:0000192!5.14e-14!42;CL:0000514!5.14e-14!42;CL:0002321!6.61e-14!248;CL:0000063!7.01e-14!578;CL:0000680!4.00e-13!57;CL:0000056!4.00e-13!57;CL:0000355!4.00e-13!57;CL:0000187!4.57e-13!54;CL:0000359!8.50e-13!32;CL:0002320!2.25e-11!365;CL:0000219!2.96e-11!390;CL:0000115!8.69e-11!35;CL:0000134!1.69e-10!358;CL:0000057!1.76e-10!75;CL:0000393!6.87e-10!60;CL:0000211!6.87e-10!60;CL:0002078!1.14e-09!44;CL:0002139!3.55e-08!24;CL:0000071!5.27e-08!18;CL:0002546!5.27e-08!18;CL:1000449!2.32e-07!16;CL:0000213!6.70e-07!57;CL:0000215!6.70e-07!57;CL:0002057!7.11e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.46e-12;32!CL:0000192;1.02e-10;43!CL:0000115;1.31e-09;36!CL:0002139;3.44e-08;24!CL:0000860;3.74e-08;33!CL:0002057;3.74e-08;33!CL:0000071;5.31e-08;18!CL:0000187;9.72e-08;55!CL:1000449;3.93e-07;15!CL:0002078;4.10e-07;45!CL:0000473;5.93e-07;39!CL:0000234;5.93e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.06e-22,433;CL:0000048,1.50e-21,427;CL:0000222,4.06e-20,121;CL:0000034,4.88e-20,441;CL:0002321,1.87e-14,250;CL:0000192,2.89e-14,43;CL:0000514,2.89e-14,43;CL:0000680,2.23e-13,58;CL:0000056,2.23e-13,58;CL:0000355,2.23e-13,58;CL:0000187,2.54e-13,55;CL:0000359,8.50e-13,32;CL:0000115,2.97e-11,36;CL:0002320,4.25e-11,361;CL:0000219,5.66e-11,386;CL:0000057,1.40e-10,76;CL:0000134,3.09e-10,354;CL:0000393,3.96e-10,61;CL:0000211,3.96e-10,61;CL:0002078,4.21e-10,45;CL:0002139,3.55e-08,24;CL:0000071,5.27e-08,18;CL:0002546,5.27e-08,18;CL:0000213,2.98e-07,58;CL:0000215,2.98e-07,58;CL:1000449,3.92e-07,15;CL:0000473,4.75e-07,48;CL:0000234,4.75e-07,48;CL:0000860,7.11e-07,42;CL:0002057,7.11e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000514;1.02e-10;43!CL:0002546;5.31e-08;18!CL:0000355;2.14e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.29e-21!216;UBERON:0002049!3.93e-20!79;UBERON:0007798!3.93e-20!79;UBERON:0004872!6.44e-19!84;UBERON:0000055!8.81e-19!69;UBERON:0001981!7.86e-18!60;UBERON:0007500!7.86e-18!60;UBERON:0004537!7.86e-18!60;UBERON:0006965!7.86e-18!60;UBERON:0003914!2.03e-16!118;UBERON:0001637!3.03e-16!42;UBERON:0003509!3.03e-16!42;UBERON:0004572!3.03e-16!42;UBERON:0002204!3.32e-15!167;UBERON:0000914!8.05e-15!83;UBERON:0002329!8.05e-15!83;UBERON:0003077!8.05e-15!83;UBERON:0003059!8.05e-15!83;UBERON:0007282!8.05e-15!83;UBERON:0009618!8.05e-15!83;UBERON:0007285!8.05e-15!83;UBERON:0004290!4.76e-14!70;UBERON:0000486!5.24e-14!82;UBERON:0004535!3.21e-13!110;UBERON:0001009!3.39e-12!113;UBERON:0005256!6.65e-12!143;UBERON:0004573!1.11e-11!33;UBERON:0004571!1.11e-11!33;UBERON:0001134!6.35e-11!61;UBERON:0002036!6.35e-11!61;UBERON:0003082!6.35e-11!61;UBERON:0002384!1.37e-10!375;UBERON:0002385!1.90e-10!63;UBERON:0001015!1.90e-10!63;UBERON:0000383!1.90e-10!63;UBERON:0000926!7.59e-10!448;UBERON:0004120!7.59e-10!448;UBERON:0006603!7.59e-10!448;UBERON:0000490!3.88e-09!138;UBERON:0001986!5.27e-08!18;UBERON:0004638!5.27e-08!18;UBERON:0004852!5.27e-08!18;UBERON:0000487!7.00e-08!22;UBERON:0004211!2.32e-07!16;UBERON:0001285!2.32e-07!16;UBERON:0007684!2.32e-07!16;UBERON:0003220!2.32e-07!16;UBERON:0004208!2.32e-07!16;UBERON:0002199!2.76e-07!45;UBERON:0002416!2.76e-07!45;UBERON:0006914!5.24e-07!25;UBERON:0000353!6.02e-07!17;UBERON:0000467!6.26e-07!625;UBERON:0000947!6.55e-07!21;UBERON:0010191!6.55e-07!21;UBERON:0000480!8.21e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.32e-11;42!UBERON:0003509;1.32e-11;42!UBERON:0004572;1.32e-11;42!UBERON:0007500;2.02e-11;56!UBERON:0001981;2.02e-11;56!UBERON:0004537;2.02e-11;56!UBERON:0003914;2.15e-11;74!UBERON:0004573;1.01e-10;33!UBERON:0004571;1.01e-10;33!UBERON:0000055;4.26e-10;65!UBERON:0002049;5.50e-09;75!UBERON:0007798;5.50e-09;75!UBERON:0004638;5.31e-08;18!UBERON:0001986;5.31e-08;18!UBERON:0004852;5.31e-08;18!UBERON:0000487;6.95e-08;22!UBERON:0006555;3.93e-07;15!UBERON:0004819;3.93e-07;15!UBERON:0001285;3.93e-07;15!UBERON:0007684;3.93e-07;15!UBERON:0006914;5.24e-07;25!UBERON:0000947;6.52e-07;21!UBERON:0010191;6.52e-07;21 | |||
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,112.849905581071,124.979725634984,101.547500263375,69.4575717062107,68.0202029749403,90.1735864175621,99.1585912397919,92.1805189117594,49.4744998319052,73.1850028896503,110.141745285506,49.153163957204,79.9701815205288,66.2021525838992,73.7858490806448,66.9854810644896,100.520301272435,46.1960307848919,101.112729318769,95.8162072220972,72.0107416512432,73.3934498349858,82.8579998419509,90.6313608264994,106.029668095587,102.71394049937,133.283888619612,77.9197899549589,64.8523999953065,112.70606485856,83.2661432080793,82.4114012422216,90.6076117214002,64.9664178946643,153.487750389064,24.4641494007653,111.399419782414,123.046876563082,112.294304061072,59.942336242482,81.5404187793504,83.4991174299768,90.3028582519746,49.3512165787609,46.488329569865,39.8822724508018,107.537520161617,85.8920169559324,105.825727698279,99.624102216982,108.751876072893,97.8278068717715,86.1698745998357,135.003366517632,74.8469269545837,61.4637980681096,88.0582320586024,66.109819790235,191.135859817307,180.622291661065,204.117100068381,83.8111340937412,146.206779454573,136.140029406552,84.757444457054,125.741816495795,79.5041333473328,65.8050247880292,97.3231948826198,36.0993227935935,47.222606495217,127.717745430963,77.658926719235,118.886608884645,155.796130848953,85.170613348014,129.830909874035,86.1760697989746,103.3633826402,88.7442224840358,84.2450336099519,70.492615602608,40.20584864006,62.024772597689,71.3853649676484,77.8687588994429,68.2356942871185,87.1902345079659,105.750174209176,120.224963759585,177.722140122116,183.647081342936,103.338450743278,101.399568289912,127.387094379472,124.63208460531,151.045860521517,120.596067881168,127.605348145601,235.617338562211,172.575580602267,114.785647585953,131.354199259834,192.668196874367,168.183051030568,206.553644535519,192.430494733753,81.864166413776,192.99185539719,173.347194877478,203.900595065982,142.436401874603,218.925336308947,122.238473106183,169.665095746344,192.395881436308,166.271542301772,154.987275799417,137.343081601023,170.411827746503,145.256383292321,157.262011253684,92.1149757069152,104.785187741573,60.9014119504789,95.5239108592674,99.5239012998876,167.159226461808,77.5815353285502,145.599227799249,140.504658458242,89.4678922281125,221.921567308027,97.8074174033538,82.2749685980464,109.671369955641,120.555189264188,101.793085319423,79.08382547879,145.755511011863,154.256079603815,102.391936804158,39.6407917104159,108.140079851637,89.8076524274165,113.792828241455,100.823684560963,82.4909752575307,113.503190713367,251.488728044014,76.9337292456945,121.927142966463,135.568033581871,207.347112315819,57.5593347192581,148.743527217523,78.5861613687137,70.1497236335554,81.4257971181644,62.5682308130033,150.416057859067,39.3520107556254,82.4587870734034,114.267005755782,132.604291693936,111.694622442743,51.0107674772106,67.525122381175,104.814462127026,71.0842183345245,107.470370329395,104.797694015071,107.077065194366,96.2829118495061,162.208369603143,95.3828712312731,127.078232765372,179.630966965036,44.8733951939065,45.9496473088595,117.628953538238,98.0286633899107,133.638895920859,72.2862476768726,124.302885390163,121.981271129062,101.238839342974,72.6402631710878,72.7537523684168,101.592127930639,51.9626068567309,82.2386650285773,71.9506208664477,150.721656416195,82.9178155380973,40.7133395267498,31.2743861663506,69.8010444872126,65.794373300525,112.119795885575,104.747694688203,111.810182153197,93.9341709739814,112.011033377532,44.67727185414,58.9526430027966,87.04883997122,141.87537769415,28.3074884946927,82.1842848458546,79.6772811596713,77.3957734377021,100.353068024026,36.5011443102598,96.1316587794396,89.3631519635258,76.162579649374,110.031783170573,120.697963305423,51.8444746360569,78.3013793052905,87.4473485398878,93.5643184255551,86.3709582389495,98.9741672110296,199.772912367822,209.263027636058,53.0194746721536,120.528486879518,93.5110484614006,40.1405879056495,86.44208337296,107.862742114453,62.1710071115698,96.6169984098496,73.0149344842221,45.0707144046985,96.3430079792329,77.7279453390184,76.9910502190035,144.701546452396,92.4506940931739,65.8444214906132,78.9377596047576,65.9894331884553,73.8119836352194,81.9848064902757,98.9014402545156,159.221706462484,124.622675241286,122.341071373849,126.625444556885,40.5317440634843,64.2268666522559,74.865195120994,79.6066663188704,76.1490610451538,94.1741061305035,76.9925223502741,149.785252890585,84.6520339260332,77.7669455557639,213.525140427715,146.50967427616,182.135782654115,58.1627218489714,63.3740317389434,140.381939120672,72.310080287065,48.633567758332,59.6397897981143,43.1216967582885,82.8261171525357,53.3248619010795,60.5293690804909,85.0219225984779,78.25687135766,69.5148139874122,129.113230762176,86.1597034426508,72.3250513644957,87.7694312655894,64.6775004666302,94.0536350914873,68.7888935181415,114.633194230828,120.636749470482,77.5098630752211,143.758172366981,44.9322126145182,77.228912914776,130.066892650338,84.4707392652435,84.8355622629093,90.3309515860939,83.8853535473746,100.435623001922,150.667191382519 | ||
|short_description=p1@ARHGDIA | |short_description=p1@ARHGDIA | ||
}} | }} |
Latest revision as of 09:11, 18 September 2015
Short description: | p1@ARHGDIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGDIA_5end |
Coexpression cluster: | C2155_Alveolar_Mesenchymal_Renal_Hair_Smooth_Fibroblast_Bronchial |
Association with transcript: | 0bp_to_ENST00000400721, uc002kbq.2, uc002kbr.2, uc010dig.1_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | A8MXW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.06e-22 | 433 |
multi fate stem cell | 1.50e-21 | 427 |
mesodermal cell | 4.06e-20 | 121 |
stem cell | 4.88e-20 | 441 |
embryonic cell | 1.87e-14 | 250 |
smooth muscle cell | 2.89e-14 | 43 |
smooth muscle myoblast | 2.89e-14 | 43 |
muscle precursor cell | 2.23e-13 | 58 |
myoblast | 2.23e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.23e-13 | 58 |
muscle cell | 2.54e-13 | 55 |
vascular associated smooth muscle cell | 8.50e-13 | 32 |
endothelial cell | 2.97e-11 | 36 |
connective tissue cell | 4.25e-11 | 361 |
motile cell | 5.66e-11 | 386 |
fibroblast | 1.40e-10 | 76 |
mesenchymal cell | 3.09e-10 | 354 |
electrically responsive cell | 3.96e-10 | 61 |
electrically active cell | 3.96e-10 | 61 |
meso-epithelial cell | 4.21e-10 | 45 |
endothelial cell of vascular tree | 3.55e-08 | 24 |
blood vessel endothelial cell | 5.27e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.27e-08 | 18 |
lining cell | 2.98e-07 | 58 |
barrier cell | 2.98e-07 | 58 |
epithelial cell of nephron | 3.92e-07 | 15 |
defensive cell | 4.75e-07 | 48 |
phagocyte | 4.75e-07 | 48 |
classical monocyte | 7.11e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.11e-07 | 42 |